RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 KIAA1468Q9P260 1216 aa17.24■□□□□ 0.35
SHTN1-204ENST00000392903 PARP3Q9Y6F1 533 aa17.24■□□□□ 0.35
SHTN1-204ENST00000392903 ATRNO75882 1429 aa17.24■□□□□ 0.35
SHTN1-204ENST00000392903 PATL2C9JE40 543 aaKnown RBP17.23■□□□□ 0.35
SHTN1-204ENST00000392903 DPCR1Q3MIW9 517 aa17.23■□□□□ 0.35
SHTN1-204ENST00000392903 MICU3Q86XE3 530 aa17.23■□□□□ 0.35
SHTN1-204ENST00000392903 GPR161Q8N6U8 529 aaKnown RBP17.23■□□□□ 0.35
SHTN1-204ENST00000392903 FBXO18Q8NFZ0 1043 aa17.23■□□□□ 0.35
SHTN1-204ENST00000392903 MRPS27Q92552 414 aaKnown RBP17.23■□□□□ 0.35
SHTN1-204ENST00000392903 ERCC4Q92889 916 aaPredicted RBP17.23■□□□□ 0.35
SHTN1-204ENST00000392903 MYL10Q9BUA6 226 aa17.23■□□□□ 0.35
SHTN1-204ENST00000392903 CARD6Q9BX69 1037 aa17.23■□□□□ 0.35
SHTN1-204ENST00000392903 LRP2BPQ9P2M1 347 aa17.23■□□□□ 0.35
SHTN1-204ENST00000392903 NRAPQ86VF7 1730 aa17.23■□□□□ 0.35
SHTN1-204ENST00000392903 FANCGO15287 622 aa17.23■□□□□ 0.35
SHTN1-204ENST00000392903 LINC00116Q8NCU8 138 aa17.23■□□□□ 0.35
SHTN1-204ENST00000392903 SDF4Q9BRK5 362 aa17.23■□□□□ 0.35
SHTN1-204ENST00000392903 TAF1P21675 1872 aa17.23■□□□□ 0.35
SHTN1-204ENST00000392903 URI1O94763 535 aaPredicted RBP17.22■□□□□ 0.35
SHTN1-204ENST00000392903 NFXL1Q6ZNB6 911 aa17.22■□□□□ 0.35
SHTN1-204ENST00000392903 BARGINQ6ZT62 677 aa17.22■□□□□ 0.35
SHTN1-204ENST00000392903 LCORLQ8N3X6 602 aa17.22■□□□□ 0.35
SHTN1-204ENST00000392903 GOLGA5Q8TBA6 731 aa17.22■□□□□ 0.35
SHTN1-204ENST00000392903 PHKBQ93100 1093 aa17.22■□□□□ 0.35
SHTN1-204ENST00000392903 EXOC4Q96A65 974 aa17.22■□□□□ 0.35
SHTN1-204ENST00000392903 ZCCHC17Q9NP64 241 aaKnown RBP17.22■□□□□ 0.35
SHTN1-204ENST00000392903 ABCF2Q9UG63 623 aa17.22■□□□□ 0.35
SHTN1-204ENST00000392903 DDX60Q8IY21 1712 aaKnown RBP17.22■□□□□ 0.35
SHTN1-204ENST00000392903 A0A1W2PQ27 194 aa17.22■□□□□ 0.35
SHTN1-204ENST00000392903 A0A1W2PQ64 194 aa17.22■□□□□ 0.35
SHTN1-204ENST00000392903 A0A1W2PQD8 194 aa17.22■□□□□ 0.35
SHTN1-204ENST00000392903 MYO1CO00159 1063 aa17.22■□□□□ 0.35
SHTN1-204ENST00000392903 SH2B2O14492 632 aaPredicted RBP17.22■□□□□ 0.35
SHTN1-204ENST00000392903 GYG1P46976 350 aa17.22■□□□□ 0.35
SHTN1-204ENST00000392903 METAP2P50579 478 aaKnown RBP eCLIP17.22■□□□□ 0.35
SHTN1-204ENST00000392903 ZRSR1Q15695 479 aaKnown RBP17.22■□□□□ 0.35
SHTN1-204ENST00000392903 RRP12Q5JTH9 1297 aaKnown RBP17.22■□□□□ 0.35
SHTN1-204ENST00000392903 ADALQ6DHV7 355 aa17.22■□□□□ 0.35
SHTN1-204ENST00000392903 FCHSD1Q86WN1 690 aa17.22■□□□□ 0.35
SHTN1-204ENST00000392903 FBXW7Q969H0 707 aa17.22■□□□□ 0.35
SHTN1-204ENST00000392903 TMX1Q9H3N1 280 aa17.22■□□□□ 0.35
SHTN1-204ENST00000392903 TOMM22Q9NS69 142 aa17.22■□□□□ 0.35
SHTN1-204ENST00000392903 ZSWIM5Q9P217 1185 aa17.22■□□□□ 0.35
SHTN1-204ENST00000392903 RSPH14Q9UHP6 348 aa17.22■□□□□ 0.35
SHTN1-204ENST00000392903 ZNF652Q9Y2D9 606 aa17.22■□□□□ 0.35
SHTN1-204ENST00000392903 CLIC4Q9Y696 253 aa17.22■□□□□ 0.35
SHTN1-204ENST00000392903 TACC3Q9Y6A5 838 aa17.22■□□□□ 0.35
SHTN1-204ENST00000392903 COL4A1P02462 1669 aa17.22■□□□□ 0.35
SHTN1-204ENST00000392903 GSG1L2A8MUP6 293 aa17.21■□□□□ 0.35
SHTN1-204ENST00000392903 CDC27P30260 824 aa17.21■□□□□ 0.35
SHTN1-204ENST00000392903 TNNT3P45378 269 aaPredicted RBP17.21■□□□□ 0.35
SHTN1-204ENST00000392903 REXO1L1PQ8IX06 675 aa17.21■□□□□ 0.35
SHTN1-204ENST00000392903 SMARCC1Q92922 1105 aaPredicted RBP17.21■□□□□ 0.35
SHTN1-204ENST00000392903 C8orf37Q96NL8 207 aa17.21■□□□□ 0.35
SHTN1-204ENST00000392903 KIF28PB7ZC32 967 aa17.21■□□□□ 0.35
SHTN1-204ENST00000392903 NCAPHQ15003 741 aa17.21■□□□□ 0.35
SHTN1-204ENST00000392903 APOA5Q6Q788 366 aa17.21■□□□□ 0.35
SHTN1-204ENST00000392903 IQUBQ8NA54 791 aa17.21■□□□□ 0.35
SHTN1-204ENST00000392903 IGDCC4Q8TDY8 1250 aa17.21■□□□□ 0.35
SHTN1-204ENST00000392903 ZKSCAN3Q9BRR0 538 aa17.21■□□□□ 0.35
SHTN1-204ENST00000392903 PCDHA7Q9UN72 937 aa17.21■□□□□ 0.35
SHTN1-204ENST00000392903 SLC4A4Q9Y6R1 1079 aa17.21■□□□□ 0.35
SHTN1-204ENST00000392903 LRP5O75197 1615 aa17.21■□□□□ 0.35
SHTN1-204ENST00000392903 TDO2P48775 406 aa17.2■□□□□ 0.34
SHTN1-204ENST00000392903 TMEM67Q5HYA8 995 aa17.2■□□□□ 0.34
SHTN1-204ENST00000392903 FAM182BQ5T319 152 aa17.2■□□□□ 0.34
SHTN1-204ENST00000392903 NGLY1Q96IV0 654 aa17.2■□□□□ 0.34
SHTN1-204ENST00000392903 ARFGAP3Q9NP61 516 aa17.2■□□□□ 0.34
SHTN1-204ENST00000392903 WDR19Q8NEZ3 1342 aa17.2■□□□□ 0.34
SHTN1-204ENST00000392903 CCDC24Q8N4L8 307 aa17.2■□□□□ 0.34
SHTN1-204ENST00000392903 A0A1B0GVL5 298 aa17.19■□□□□ 0.34
SHTN1-204ENST00000392903 UBE2Q2LH0YL09 131 aa17.19■□□□□ 0.34
SHTN1-204ENST00000392903 IKBKBO14920 756 aa17.19■□□□□ 0.34
SHTN1-204ENST00000392903 NLRP12P59046 1061 aa17.19■□□□□ 0.34
SHTN1-204ENST00000392903 FANCCQ00597 558 aa17.19■□□□□ 0.34
SHTN1-204ENST00000392903 SF3A1Q15459 793 aaKnown RBP17.19■□□□□ 0.34
SHTN1-204ENST00000392903 ADGRA1Q86SQ6 560 aa17.19■□□□□ 0.34
SHTN1-204ENST00000392903 CDC5LQ99459 802 aaKnown RBP17.19■□□□□ 0.34
SHTN1-204ENST00000392903 FUT8Q9BYC5 575 aa17.19■□□□□ 0.34
SHTN1-204ENST00000392903 RTEL1Q9NZ71 1219 aa17.19■□□□□ 0.34
SHTN1-204ENST00000392903 ZMYM6O95789 1325 aa17.19■□□□□ 0.34
SHTN1-204ENST00000392903 IFIT3O14879 490 aaKnown RBP17.19■□□□□ 0.34
SHTN1-204ENST00000392903 ZSCAN12O43309 604 aa17.19■□□□□ 0.34
SHTN1-204ENST00000392903 CASQ1P31415 396 aa17.19■□□□□ 0.34
SHTN1-204ENST00000392903 NOP2P46087 812 aaKnown RBP17.19■□□□□ 0.34
SHTN1-204ENST00000392903 NDUFA8P51970 172 aa17.19■□□□□ 0.34
SHTN1-204ENST00000392903 IRX3P78415 501 aaPredicted RBP17.19■□□□□ 0.34
SHTN1-204ENST00000392903 MAP3K9P80192 1104 aa17.19■□□□□ 0.34
SHTN1-204ENST00000392903 STK38Q15208 465 aa17.19■□□□□ 0.34
SHTN1-204ENST00000392903 RSRC2Q7L4I2 434 aaKnown RBP17.19■□□□□ 0.34
SHTN1-204ENST00000392903 ANKRD18AQ8IVF6 992 aa17.19■□□□□ 0.34
SHTN1-204ENST00000392903 LY9Q9HBG7 655 aa17.19■□□□□ 0.34
SHTN1-204ENST00000392903 LCMT1Q9UIC8 334 aa17.19■□□□□ 0.34
SHTN1-204ENST00000392903 ADAM21Q9UKJ8 722 aa17.19■□□□□ 0.34
SHTN1-204ENST00000392903 ZBTB43O43298 467 aa17.18■□□□□ 0.34
SHTN1-204ENST00000392903 ALX1Q15699 326 aa17.18■□□□□ 0.34
SHTN1-204ENST00000392903 CTR9Q6PD62 1173 aa17.18■□□□□ 0.34
SHTN1-204ENST00000392903 MFSD6Q6ZSS7 791 aa17.18■□□□□ 0.34
SHTN1-204ENST00000392903 SRLQ86TD4 932 aa17.18■□□□□ 0.34
SHTN1-204ENST00000392903 LINC00301Q8NCQ3 95 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms