RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 CYP2D6P10635 497 aa13.38□□□□□ -0.27
SMARCAL1-203ENST00000392128 RESTQ13127 1097 aa13.38□□□□□ -0.27
SMARCAL1-203ENST00000392128 GRIPAP1Q4V328 841 aa13.38□□□□□ -0.27
SMARCAL1-203ENST00000392128 CPLX2Q6PUV4 134 aaKnown RBP13.38□□□□□ -0.27
SMARCAL1-203ENST00000392128 FERMT3Q86UX7 667 aa13.38□□□□□ -0.27
SMARCAL1-203ENST00000392128 IQCA1Q86XH1 822 aa13.38□□□□□ -0.27
SMARCAL1-203ENST00000392128 AMOTL1Q8IY63 956 aa13.38□□□□□ -0.27
SMARCAL1-203ENST00000392128 CERS5Q8N5B7 392 aa13.38□□□□□ -0.27
SMARCAL1-203ENST00000392128 ZSCAN10Q96SZ4 725 aaPredicted RBP13.38□□□□□ -0.27
SMARCAL1-203ENST00000392128 SCN9AQ15858 1988 aa13.38□□□□□ -0.27
SMARCAL1-203ENST00000392128 RANBP6O60518 1105 aaKnown RBP13.38□□□□□ -0.27
SMARCAL1-203ENST00000392128 CDC27P30260 824 aa13.38□□□□□ -0.27
SMARCAL1-203ENST00000392128 RHBDL3P58872 404 aa13.38□□□□□ -0.27
SMARCAL1-203ENST00000392128 FKBP1AP62942 108 aaKnown RBP13.38□□□□□ -0.27
SMARCAL1-203ENST00000392128 TGFBRAP1Q8WUH2 860 aa13.38□□□□□ -0.27
SMARCAL1-203ENST00000392128 GDPD2Q9HCC8 539 aa13.38□□□□□ -0.27
SMARCAL1-203ENST00000392128 FAM217BQ9NTX9 383 aaPredicted RBP13.38□□□□□ -0.27
SMARCAL1-203ENST00000392128 ORC3Q9UBD5 711 aaPredicted RBP13.38□□□□□ -0.27
SMARCAL1-203ENST00000392128 DAGLAQ9Y4D2 1042 aa13.38□□□□□ -0.27
SMARCAL1-203ENST00000392128 PRDM1O75626 825 aa13.37□□□□□ -0.27
SMARCAL1-203ENST00000392128 ADD1P35611 737 aaKnown RBP13.37□□□□□ -0.27
SMARCAL1-203ENST00000392128 KRT85P78386 507 aa13.37□□□□□ -0.27
SMARCAL1-203ENST00000392128 EVX2Q03828 476 aa13.37□□□□□ -0.27
SMARCAL1-203ENST00000392128 NTRK3Q16288 839 aa13.37□□□□□ -0.27
SMARCAL1-203ENST00000392128 TEX11Q8IYF3 940 aa13.37□□□□□ -0.27
SMARCAL1-203ENST00000392128 SUPT20HQ8NEM7 779 aa13.37□□□□□ -0.27
SMARCAL1-203ENST00000392128 FBXW7Q969H0 707 aa13.37□□□□□ -0.27
SMARCAL1-203ENST00000392128 RXRAP19793 462 aa13.37□□□□□ -0.27
SMARCAL1-203ENST00000392128 ENAHQ8N8S7 591 aaPredicted RBP13.37□□□□□ -0.27
SMARCAL1-203ENST00000392128 MYL10Q9BUA6 226 aa13.37□□□□□ -0.27
SMARCAL1-203ENST00000392128 DBNDD1Q9H9R9 158 aa13.37□□□□□ -0.27
SMARCAL1-203ENST00000392128 FIBPO43427 364 aa13.36□□□□□ -0.27
SMARCAL1-203ENST00000392128 NCLP19338 710 aaKnown RBP13.36□□□□□ -0.27
SMARCAL1-203ENST00000392128 PPP2R5BQ15173 497 aa13.36□□□□□ -0.27
SMARCAL1-203ENST00000392128 MAPKAPK5Q8IW41 473 aa13.36□□□□□ -0.27
SMARCAL1-203ENST00000392128 ZNF654Q8IZM8 581 aa13.36□□□□□ -0.27
SMARCAL1-203ENST00000392128 TTLL6Q8N841 843 aa13.36□□□□□ -0.27
SMARCAL1-203ENST00000392128 TTF2Q9UNY4 1162 aaKnown RBP13.36□□□□□ -0.27
SMARCAL1-203ENST00000392128 PSME4Q14997 1843 aa13.36□□□□□ -0.27
SMARCAL1-203ENST00000392128 FLT1P17948 1338 aa13.36□□□□□ -0.27
SMARCAL1-203ENST00000392128 STK36Q9NRP7 1315 aa13.36□□□□□ -0.27
SMARCAL1-203ENST00000392128 ECE2O60344 883 aa13.35□□□□□ -0.27
SMARCAL1-203ENST00000392128 KIAA2012Q0VF49 1180 aa13.35□□□□□ -0.27
SMARCAL1-203ENST00000392128 STRIP1Q5VSL9 837 aa13.35□□□□□ -0.27
SMARCAL1-203ENST00000392128 C8orf76Q96K31 380 aa13.35□□□□□ -0.27
SMARCAL1-203ENST00000392128 ZNF219Q9P2Y4 722 aaPredicted RBP13.35□□□□□ -0.27
SMARCAL1-203ENST00000392128 ELP1O95163 1332 aa13.35□□□□□ -0.27
SMARCAL1-203ENST00000392128 ADAMTSL1Q8N6G6 1762 aa13.35□□□□□ -0.27
SMARCAL1-203ENST00000392128 CCDC196A0A1B0GTZ2 297 aa13.35□□□□□ -0.27
SMARCAL1-203ENST00000392128 PPFIA3O75145 1194 aa13.35□□□□□ -0.27
SMARCAL1-203ENST00000392128 UBE2HP62256 183 aa13.35□□□□□ -0.27
SMARCAL1-203ENST00000392128 RTN1Q16799 776 aa13.35□□□□□ -0.27
SMARCAL1-203ENST00000392128 IFIT1BQ5T764 474 aaKnown RBP13.35□□□□□ -0.27
SMARCAL1-203ENST00000392128 HHIPL2Q6UWX4 724 aa13.35□□□□□ -0.27
SMARCAL1-203ENST00000392128 CCDC144CPQ8IYA2 1237 aa13.35□□□□□ -0.27
SMARCAL1-203ENST00000392128 GADD45BO75293 160 aaPredicted RBP13.34□□□□□ -0.27
SMARCAL1-203ENST00000392128 IFNAR1P17181 557 aa13.34□□□□□ -0.27
SMARCAL1-203ENST00000392128 CAVIN1Q6NZI2 390 aaKnown RBP13.34□□□□□ -0.27
SMARCAL1-203ENST00000392128 FANCBQ8NB91 859 aa13.34□□□□□ -0.27
SMARCAL1-203ENST00000392128 FBXO18Q8NFZ0 1043 aa13.34□□□□□ -0.27
SMARCAL1-203ENST00000392128 MRIQ9BWK5 157 aa13.34□□□□□ -0.27
SMARCAL1-203ENST00000392128 SCAND2PQ9GZW5 306 aaPredicted RBP13.34□□□□□ -0.27
SMARCAL1-203ENST00000392128 C21orf2O43822 256 aa13.34□□□□□ -0.27
SMARCAL1-203ENST00000392128 POLR3DP05423 398 aaPredicted RBP13.34□□□□□ -0.27
SMARCAL1-203ENST00000392128 KCNA3P22001 575 aa13.34□□□□□ -0.27
SMARCAL1-203ENST00000392128 IARSP41252 1262 aaKnown RBP13.34□□□□□ -0.27
SMARCAL1-203ENST00000392128 FAM173BQ6P4H8 233 aa13.34□□□□□ -0.27
SMARCAL1-203ENST00000392128 MXD3Q9BW11 206 aa13.34□□□□□ -0.27
SMARCAL1-203ENST00000392128 ZNF287Q9HBT7 754 aa13.34□□□□□ -0.27
SMARCAL1-203ENST00000392128 ISY1Q9ULR0 285 aaKnown RBP13.34□□□□□ -0.27
SMARCAL1-203ENST00000392128 MYH6P13533 1939 aa13.33□□□□□ -0.27
SMARCAL1-203ENST00000392128 TSPY2A6NKD2 308 aa13.33□□□□□ -0.27
SMARCAL1-203ENST00000392128 F8W031 263 aaPredicted RBP13.33□□□□□ -0.27
SMARCAL1-203ENST00000392128 FMNL1O95466 1100 aaPredicted RBP13.33□□□□□ -0.27
SMARCAL1-203ENST00000392128 CALM1P0DP23 149 aa13.33□□□□□ -0.27
SMARCAL1-203ENST00000392128 CALM2P0DP24 149 aa13.33□□□□□ -0.27
SMARCAL1-203ENST00000392128 CALM3P0DP25 149 aa13.33□□□□□ -0.27
SMARCAL1-203ENST00000392128 PLCD1P51178 756 aa13.33□□□□□ -0.27
SMARCAL1-203ENST00000392128 FOSBP53539 338 aa13.33□□□□□ -0.27
SMARCAL1-203ENST00000392128 AOC3Q16853 763 aa13.33□□□□□ -0.27
SMARCAL1-203ENST00000392128 CCDC93Q567U6 631 aa13.33□□□□□ -0.27
SMARCAL1-203ENST00000392128 DACT2Q5SW24 774 aa13.33□□□□□ -0.27
SMARCAL1-203ENST00000392128 CATIPQ7Z7H3 387 aa13.33□□□□□ -0.27
SMARCAL1-203ENST00000392128 RTKN2Q8IZC4 609 aa13.33□□□□□ -0.27
SMARCAL1-203ENST00000392128 TEKT1Q969V4 418 aa13.33□□□□□ -0.27
SMARCAL1-203ENST00000392128 DYNLL2Q96FJ2 89 aa13.33□□□□□ -0.27
SMARCAL1-203ENST00000392128 FSD2A1L4K1 749 aa13.33□□□□□ -0.28
SMARCAL1-203ENST00000392128 USP17L3A6NCW0 530 aa13.33□□□□□ -0.28
SMARCAL1-203ENST00000392128 USP17L4A6NCW7 530 aa13.33□□□□□ -0.28
SMARCAL1-203ENST00000392128 DDAH1O94760 285 aa13.33□□□□□ -0.28
SMARCAL1-203ENST00000392128 DPEP1P16444 411 aa13.33□□□□□ -0.28
SMARCAL1-203ENST00000392128 SSRP1Q08945 709 aaKnown RBP13.33□□□□□ -0.28
SMARCAL1-203ENST00000392128 FAM47AQ5JRC9 791 aa13.33□□□□□ -0.28
SMARCAL1-203ENST00000392128 ATL3Q6DD88 541 aa13.33□□□□□ -0.28
SMARCAL1-203ENST00000392128 USP17L1Q7RTZ2 530 aa13.33□□□□□ -0.28
SMARCAL1-203ENST00000392128 PHKBQ93100 1093 aa13.33□□□□□ -0.28
SMARCAL1-203ENST00000392128 PSMD1Q99460 953 aa13.33□□□□□ -0.28
SMARCAL1-203ENST00000392128 KCNQ5Q9NR82 932 aa13.33□□□□□ -0.28
SMARCAL1-203ENST00000392128 SAP30BPQ9UHR5 308 aaKnown RBP13.33□□□□□ -0.28
SMARCAL1-203ENST00000392128 HDLBPQ00341 1268 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms