RNA–Protein interactions for RNA: ENST00000391014.1

RNU6-1228P-201, Transcript of RNA, U6 small nuclear 1228, pseudogene, humanhuman

BASIC

Gene RNU6-1228P, Length 107 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1228P-201ENST00000391014 CCER1Q8TC90 406 aaPredicted RBP3.44□□□□□ -1.86
RNU6-1228P-201ENST00000391014 ASB11Q8WXH4 323 aa3.44□□□□□ -1.86
RNU6-1228P-201ENST00000391014 CITED4Q96RK1 184 aa3.44□□□□□ -1.86
RNU6-1228P-201ENST00000391014 PITPNM2Q9BZ72 1349 aa3.44□□□□□ -1.86
RNU6-1228P-201ENST00000391014 C1QTNF9P0C862 333 aa3.43□□□□□ -1.86
RNU6-1228P-201ENST00000391014 RAP1GAPP47736 663 aa3.43□□□□□ -1.86
RNU6-1228P-201ENST00000391014 SYDE1Q6ZW31 735 aaPredicted RBP3.43□□□□□ -1.86
RNU6-1228P-201ENST00000391014 C3orf58Q8NDZ4 430 aa3.43□□□□□ -1.86
RNU6-1228P-201ENST00000391014 BHLHE22Q8NFJ8 381 aaPredicted RBP3.43□□□□□ -1.86
RNU6-1228P-201ENST00000391014 RIN3Q8TB24 985 aa3.43□□□□□ -1.86
RNU6-1228P-201ENST00000391014 ALKBH8Q96BT7 664 aaKnown RBP3.43□□□□□ -1.86
RNU6-1228P-201ENST00000391014 HSPA12BQ96MM6 686 aa3.43□□□□□ -1.86
RNU6-1228P-201ENST00000391014 NECAB3Q96P71 396 aaPredicted RBP3.43□□□□□ -1.86
RNU6-1228P-201ENST00000391014 RBCK1Q9BYM8 510 aa3.43□□□□□ -1.86
RNU6-1228P-201ENST00000391014 KRTAP4-5Q9BYR2 181 aa3.43□□□□□ -1.86
RNU6-1228P-201ENST00000391014 CARS2Q9HA77 564 aaKnown RBP3.43□□□□□ -1.86
RNU6-1228P-201ENST00000391014 CBX8Q9HC52 389 aa3.43□□□□□ -1.86
RNU6-1228P-201ENST00000391014 ATP13A1Q9HD20 1204 aa3.43□□□□□ -1.86
RNU6-1228P-201ENST00000391014 SEMA3GQ9NS98 782 aa3.43□□□□□ -1.86
RNU6-1228P-201ENST00000391014 FAM53CQ9NYF3 392 aa3.43□□□□□ -1.86
RNU6-1228P-201ENST00000391014 ENC1O14682 589 aa3.42□□□□□ -1.86
RNU6-1228P-201ENST00000391014 SLITRK5O94991 958 aa3.42□□□□□ -1.86
RNU6-1228P-201ENST00000391014 GLI1P08151 1106 aa3.42□□□□□ -1.86
RNU6-1228P-201ENST00000391014 PTPN11Q06124 597 aaPredicted RBP3.42□□□□□ -1.86
RNU6-1228P-201ENST00000391014 INPP5AQ14642 412 aa3.42□□□□□ -1.86
RNU6-1228P-201ENST00000391014 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.42□□□□□ -1.86
RNU6-1228P-201ENST00000391014 ZBTB37Q5TC79 503 aa3.42□□□□□ -1.86
RNU6-1228P-201ENST00000391014 LCE5AQ5TCM9 118 aa3.42□□□□□ -1.86
RNU6-1228P-201ENST00000391014 TPTE2Q6XPS3 522 aa3.42□□□□□ -1.86
RNU6-1228P-201ENST00000391014 TMC7Q7Z402 723 aa3.42□□□□□ -1.86
RNU6-1228P-201ENST00000391014 NLRP2Q9NX02 1062 aa3.42□□□□□ -1.86
RNU6-1228P-201ENST00000391014 GTF2IRD1Q9UHL9 959 aa3.42□□□□□ -1.86
RNU6-1228P-201ENST00000391014 FBXO24O75426 580 aa3.41□□□□□ -1.86
RNU6-1228P-201ENST00000391014 TSPAN15O95858 294 aa3.41□□□□□ -1.86
RNU6-1228P-201ENST00000391014 XRCC5P13010 732 aaKnown RBP3.41□□□□□ -1.86
RNU6-1228P-201ENST00000391014 AFMP43652 599 aa3.41□□□□□ -1.86
RNU6-1228P-201ENST00000391014 DSC3Q14574 896 aa3.41□□□□□ -1.86
RNU6-1228P-201ENST00000391014 CDKAL1Q5VV42 579 aa3.41□□□□□ -1.86
RNU6-1228P-201ENST00000391014 ARMCX6Q7L4S7 300 aa3.41□□□□□ -1.86
RNU6-1228P-201ENST00000391014 CYFIP1Q7L576 1253 aa3.41□□□□□ -1.86
RNU6-1228P-201ENST00000391014 LRRC56Q8IYG6 542 aaPredicted RBP3.41□□□□□ -1.86
RNU6-1228P-201ENST00000391014 ACSBG1Q96GR2 724 aa3.41□□□□□ -1.86
RNU6-1228P-201ENST00000391014 KIRREL1Q96J84 757 aa3.41□□□□□ -1.86
RNU6-1228P-201ENST00000391014 DMRTB1Q96MA1 342 aa3.41□□□□□ -1.86
RNU6-1228P-201ENST00000391014 EMILIN2Q9BXX0 1053 aa3.41□□□□□ -1.86
RNU6-1228P-201ENST00000391014 FBRSQ9HAH7 460 aa3.41□□□□□ -1.86
RNU6-1228P-201ENST00000391014 PPP4R2Q9NY27 417 aa3.41□□□□□ -1.86
RNU6-1228P-201ENST00000391014 LMCD1Q9NZU5 365 aa3.41□□□□□ -1.86
RNU6-1228P-201ENST00000391014 GNAT3A8MTJ3 354 aa3.4□□□□□ -1.87
RNU6-1228P-201ENST00000391014 FANCGO15287 622 aa3.4□□□□□ -1.87
RNU6-1228P-201ENST00000391014 ZSCAN22P10073 491 aaPredicted RBP3.4□□□□□ -1.87
RNU6-1228P-201ENST00000391014 CDK8P49336 464 aa3.4□□□□□ -1.87
RNU6-1228P-201ENST00000391014 CLCN7P51798 805 aa3.4□□□□□ -1.87
RNU6-1228P-201ENST00000391014 SLBPQ14493 270 aaKnown RBP eCLIP3.4□□□□□ -1.87
RNU6-1228P-201ENST00000391014 NKG7Q16617 165 aa3.4□□□□□ -1.87
RNU6-1228P-201ENST00000391014 TMEM67Q5HYA8 995 aa3.4□□□□□ -1.87
RNU6-1228P-201ENST00000391014 LILRA6Q6PI73 481 aa3.4□□□□□ -1.87
RNU6-1228P-201ENST00000391014 MPZL3Q6UWV2 235 aa3.4□□□□□ -1.87
RNU6-1228P-201ENST00000391014 TOX2Q96NM4 488 aa3.4□□□□□ -1.87
RNU6-1228P-201ENST00000391014 DIRC2Q96SL1 478 aa3.4□□□□□ -1.87
RNU6-1228P-201ENST00000391014 SETDB2Q96T68 719 aa3.4□□□□□ -1.87
RNU6-1228P-201ENST00000391014 OSBPL7Q9BZF2 842 aa3.4□□□□□ -1.87
RNU6-1228P-201ENST00000391014 PRDM5Q9NQX1 630 aaPredicted RBP3.4□□□□□ -1.87
RNU6-1228P-201ENST00000391014 PCDHA4Q9UN74 947 aa3.4□□□□□ -1.87
RNU6-1228P-201ENST00000391014 USTQ9Y2C2 406 aa3.4□□□□□ -1.87
RNU6-1228P-201ENST00000391014 ST14Q9Y5Y6 855 aa3.4□□□□□ -1.87
RNU6-1228P-201ENST00000391014 PNMA6FA0A0J9YX94 578 aa3.39□□□□□ -1.87
RNU6-1228P-201ENST00000391014 WASH4PA8MWX3 477 aa3.39□□□□□ -1.87
RNU6-1228P-201ENST00000391014 H3BS24 57 aa3.39□□□□□ -1.87
RNU6-1228P-201ENST00000391014 LRIG2O94898 1065 aa3.39□□□□□ -1.87
RNU6-1228P-201ENST00000391014 TRIM37O94972 964 aa3.39□□□□□ -1.87
RNU6-1228P-201ENST00000391014 GDNFP39905 211 aa3.39□□□□□ -1.87
RNU6-1228P-201ENST00000391014 ERVFC1P60507 584 aa3.39□□□□□ -1.87
RNU6-1228P-201ENST00000391014 FGD1P98174 961 aa3.39□□□□□ -1.87
RNU6-1228P-201ENST00000391014 LRFN4Q6PJG9 635 aa3.39□□□□□ -1.87
RNU6-1228P-201ENST00000391014 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.39□□□□□ -1.87
RNU6-1228P-201ENST00000391014 CDC37L1Q7L3B6 337 aa3.39□□□□□ -1.87
RNU6-1228P-201ENST00000391014 ANKLE2Q86XL3 938 aa3.39□□□□□ -1.87
RNU6-1228P-201ENST00000391014 SIAH1Q8IUQ4 282 aa3.39□□□□□ -1.87
RNU6-1228P-201ENST00000391014 KRTAP9-3Q9BYQ3 159 aa3.39□□□□□ -1.87
RNU6-1228P-201ENST00000391014 FOXQ1Q9C009 403 aa3.39□□□□□ -1.87
RNU6-1228P-201ENST00000391014 NSUN3Q9H649 340 aaKnown RBP3.39□□□□□ -1.87
RNU6-1228P-201ENST00000391014 PICK1Q9NRD5 415 aa3.39□□□□□ -1.87
RNU6-1228P-201ENST00000391014 MAPK8IP1Q9UQF2 711 aa3.39□□□□□ -1.87
RNU6-1228P-201ENST00000391014 CAPN6Q9Y6Q1 641 aa3.39□□□□□ -1.87
RNU6-1228P-201ENST00000391014 SOWAHDA6NJG2 315 aa3.38□□□□□ -1.87
RNU6-1228P-201ENST00000391014 NPIPB6E9PJ23 425 aa3.38□□□□□ -1.87
RNU6-1228P-201ENST00000391014 CELA3AP09093 270 aa3.38□□□□□ -1.87
RNU6-1228P-201ENST00000391014 BUD31P41223 144 aaPredicted RBP3.38□□□□□ -1.87
RNU6-1228P-201ENST00000391014 PLCB3Q01970 1234 aa3.38□□□□□ -1.87
RNU6-1228P-201ENST00000391014 ENOX2Q16206 610 aaKnown RBP3.38□□□□□ -1.87
RNU6-1228P-201ENST00000391014 TTLL10Q6ZVT0 673 aa3.38□□□□□ -1.87
RNU6-1228P-201ENST00000391014 NPAS4Q8IUM7 802 aa3.38□□□□□ -1.87
RNU6-1228P-201ENST00000391014 ZSCAN18Q8TBC5 510 aaPredicted RBP3.38□□□□□ -1.87
RNU6-1228P-201ENST00000391014 ZNF507Q8TCN5 953 aa3.38□□□□□ -1.87
RNU6-1228P-201ENST00000391014 UBE2FQ969M7 185 aa3.38□□□□□ -1.87
RNU6-1228P-201ENST00000391014 PPP1R16BQ96T49 567 aa3.38□□□□□ -1.87
RNU6-1228P-201ENST00000391014 MIPEPQ99797 713 aa3.38□□□□□ -1.87
RNU6-1228P-201ENST00000391014 DNAJC25-GNG10A0A024R161 153 aa3.37□□□□□ -1.87
RNU6-1228P-201ENST00000391014 PRAMEF27A3QJZ7 478 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms