RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 ARAP3Q8WWN8 1544 aa16.08■□□□□ 0.16
RTF1-201ENST00000389629 TMEM2Q9UHN6 1383 aa16.07■□□□□ 0.16
RTF1-201ENST00000389629 TRIM66O15016 1216 aa16.07■□□□□ 0.16
RTF1-201ENST00000389629 GJB4Q9NTQ9 266 aa16.07■□□□□ 0.16
RTF1-201ENST00000389629 SYNRGQ9UMZ2 1314 aa16.07■□□□□ 0.16
RTF1-201ENST00000389629 ZMYND10O75800 440 aa16.07■□□□□ 0.16
RTF1-201ENST00000389629 CYP26C1Q6V0L0 522 aa16.07■□□□□ 0.16
RTF1-201ENST00000389629 SRGAP1Q7Z6B7 1085 aa16.07■□□□□ 0.16
RTF1-201ENST00000389629 NRXN1Q9ULB1 1477 aa16.07■□□□□ 0.16
RTF1-201ENST00000389629 ARID5AQ03989 594 aa16.07■□□□□ 0.16
RTF1-201ENST00000389629 MSL1Q68DK7 614 aa16.07■□□□□ 0.16
RTF1-201ENST00000389629 ANKRD18AQ8IVF6 992 aa16.07■□□□□ 0.16
RTF1-201ENST00000389629 BMP2KQ9NSY1 1161 aaPredicted RBP16.07■□□□□ 0.16
RTF1-201ENST00000389629 ADGRB1O14514 1584 aa16.07■□□□□ 0.16
RTF1-201ENST00000389629 BMP15O95972 392 aa16.07■□□□□ 0.16
RTF1-201ENST00000389629 IFIT1BQ5T764 474 aaKnown RBP16.07■□□□□ 0.16
RTF1-201ENST00000389629 ESR2Q92731 530 aa16.07■□□□□ 0.16
RTF1-201ENST00000389629 DCAF5Q96JK2 942 aa16.07■□□□□ 0.16
RTF1-201ENST00000389629 COL3A1P02461 1466 aaPredicted RBP16.07■□□□□ 0.16
RTF1-201ENST00000389629 LRRC24Q50LG9 513 aa16.06■□□□□ 0.16
RTF1-201ENST00000389629 B4GALNT4Q76KP1 1039 aa16.06■□□□□ 0.16
RTF1-201ENST00000389629 TMEM87BQ96K49 555 aa16.06■□□□□ 0.16
RTF1-201ENST00000389629 PTPRMP28827 1452 aa16.06■□□□□ 0.16
RTF1-201ENST00000389629 GOLGA6L10A0A0M3HER8 536 aa16.06■□□□□ 0.16
RTF1-201ENST00000389629 MBD4O95243 580 aa16.06■□□□□ 0.16
RTF1-201ENST00000389629 GNGT1P63211 74 aa16.06■□□□□ 0.16
RTF1-201ENST00000389629 CPLX4Q7Z7G2 160 aa16.06■□□□□ 0.16
RTF1-201ENST00000389629 POTEDQ86YR6 584 aa16.06■□□□□ 0.16
RTF1-201ENST00000389629 TMTC1Q8IUR5 882 aa16.06■□□□□ 0.16
RTF1-201ENST00000389629 HECW2Q9P2P5 1572 aa16.06■□□□□ 0.16
RTF1-201ENST00000389629 NEO1Q92859 1461 aa16.06■□□□□ 0.16
RTF1-201ENST00000389629 PSMA7O14818 248 aa16.06■□□□□ 0.16
RTF1-201ENST00000389629 A1BGP04217 495 aa16.06■□□□□ 0.16
RTF1-201ENST00000389629 TUBB2AQ13885 445 aa16.06■□□□□ 0.16
RTF1-201ENST00000389629 CC2D1AQ6P1N0 951 aaPredicted RBP16.06■□□□□ 0.16
RTF1-201ENST00000389629 TUBB2BQ9BVA1 445 aa16.06■□□□□ 0.16
RTF1-201ENST00000389629 POLR3EQ9NVU0 708 aa16.06■□□□□ 0.16
RTF1-201ENST00000389629 CCDC151A5D8V7 595 aa16.06■□□□□ 0.16
RTF1-201ENST00000389629 CYP7A1P22680 504 aa16.06■□□□□ 0.16
RTF1-201ENST00000389629 ST5P78524 1137 aa16.06■□□□□ 0.16
RTF1-201ENST00000389629 EFCC1Q9HA90 598 aa16.06■□□□□ 0.16
RTF1-201ENST00000389629 CDC23Q9UJX2 597 aa16.06■□□□□ 0.16
RTF1-201ENST00000389629 ALKQ9UM73 1620 aa16.05■□□□□ 0.16
RTF1-201ENST00000389629 STX10O60499 249 aa16.05■□□□□ 0.16
RTF1-201ENST00000389629 KRT2P35908 639 aa16.05■□□□□ 0.16
RTF1-201ENST00000389629 FAM71BQ8TC56 605 aa16.05■□□□□ 0.16
RTF1-201ENST00000389629 TAF6LQ9Y6J9 622 aa16.05■□□□□ 0.16
RTF1-201ENST00000389629 CYP2C19P33261 490 aa16.05■□□□□ 0.16
RTF1-201ENST00000389629 MCM7P33993 719 aa16.05■□□□□ 0.16
RTF1-201ENST00000389629 SLC39A14Q15043 492 aa16.05■□□□□ 0.16
RTF1-201ENST00000389629 PYM1Q9BRP8 204 aaKnown RBP16.05■□□□□ 0.16
RTF1-201ENST00000389629 FUCA2Q9BTY2 467 aa16.05■□□□□ 0.16
RTF1-201ENST00000389629 ATP1A2P50993 1020 aa16.05■□□□□ 0.16
RTF1-201ENST00000389629 IQCB1Q15051 598 aa16.05■□□□□ 0.16
RTF1-201ENST00000389629 SLC35F6Q8N357 371 aa16.05■□□□□ 0.16
RTF1-201ENST00000389629 ADGRB2O60241 1585 aa16.05■□□□□ 0.16
RTF1-201ENST00000389629 CTDSPL2Q05D32 466 aa16.05■□□□□ 0.16
RTF1-201ENST00000389629 CCDC40Q4G0X9 1142 aa16.05■□□□□ 0.16
RTF1-201ENST00000389629 ZMYM1Q5SVZ6 1142 aa16.05■□□□□ 0.16
RTF1-201ENST00000389629 DHX40Q8IX18 779 aaKnown RBP16.05■□□□□ 0.16
RTF1-201ENST00000389629 IQUBQ8NA54 791 aa16.05■□□□□ 0.16
RTF1-201ENST00000389629 MYO3AQ8NEV4 1616 aa16.04■□□□□ 0.16
RTF1-201ENST00000389629 MAST3O60307 1309 aa16.04■□□□□ 0.16
RTF1-201ENST00000389629 IKBKBO14920 756 aa16.04■□□□□ 0.16
RTF1-201ENST00000389629 CMTR1Q8N1G2 835 aaKnown RBP16.04■□□□□ 0.16
RTF1-201ENST00000389629 TCP11L1Q9NUJ3 509 aa16.04■□□□□ 0.16
RTF1-201ENST00000389629 ENC1O14682 589 aa16.04■□□□□ 0.16
RTF1-201ENST00000389629 COBLO75128 1261 aa16.04■□□□□ 0.16
RTF1-201ENST00000389629 EPHA10Q5JZY3 1008 aa16.04■□□□□ 0.16
RTF1-201ENST00000389629 JAKMIP2Q96AA8 810 aa16.04■□□□□ 0.16
RTF1-201ENST00000389629 MKNK2Q9HBH9 465 aa16.04■□□□□ 0.16
RTF1-201ENST00000389629 hCG_1642624A0A1W2PR95 340 aa16.04■□□□□ 0.16
RTF1-201ENST00000389629 SMIM23A6NLE4 172 aa16.04■□□□□ 0.16
RTF1-201ENST00000389629 ATP2B2Q01814 1243 aa16.04■□□□□ 0.16
RTF1-201ENST00000389629 PTPN12Q05209 780 aaKnown RBP16.04■□□□□ 0.16
RTF1-201ENST00000389629 ABCB6Q9NP58 842 aa16.04■□□□□ 0.16
RTF1-201ENST00000389629 CAMSAP1Q5T5Y3 1602 aa16.03■□□□□ 0.16
RTF1-201ENST00000389629 TSPY2A6NKD2 308 aa16.03■□□□□ 0.16
RTF1-201ENST00000389629 BTBD18B2RXH4 712 aa16.03■□□□□ 0.16
RTF1-201ENST00000389629 RNF40O75150 1001 aa16.03■□□□□ 0.16
RTF1-201ENST00000389629 USP5P45974 858 aa16.03■□□□□ 0.16
RTF1-201ENST00000389629 ICE2Q659A1 982 aa16.03■□□□□ 0.16
RTF1-201ENST00000389629 BICDL1Q6ZP65 573 aa16.03■□□□□ 0.16
RTF1-201ENST00000389629 AIFM3Q96NN9 605 aa16.03■□□□□ 0.16
RTF1-201ENST00000389629 ORAI2Q96SN7 254 aa16.03■□□□□ 0.16
RTF1-201ENST00000389629 ARMT1Q9H993 441 aa16.03■□□□□ 0.16
RTF1-201ENST00000389629 WWC3Q9ULE0 1092 aa16.03■□□□□ 0.16
RTF1-201ENST00000389629 CAVIN4Q5BKX8 364 aa16.03■□□□□ 0.16
RTF1-201ENST00000389629 FAM114A1Q8IWE2 563 aa16.03■□□□□ 0.16
RTF1-201ENST00000389629 EXOC1Q9NV70 894 aa16.03■□□□□ 0.16
RTF1-201ENST00000389629 SAR1BQ9Y6B6 198 aa16.03■□□□□ 0.16
RTF1-201ENST00000389629 TLDC2A0PJX2 215 aa16.03■□□□□ 0.16
RTF1-201ENST00000389629 DEXIO95424 95 aa16.03■□□□□ 0.16
RTF1-201ENST00000389629 ATP6V1AP38606 617 aa16.03■□□□□ 0.16
RTF1-201ENST00000389629 KIF23Q02241 960 aaPredicted RBP16.03■□□□□ 0.16
RTF1-201ENST00000389629 TSG101Q99816 390 aa16.03■□□□□ 0.16
RTF1-201ENST00000389629 WHAMMP3Q1A5X7 153 aa16.03■□□□□ 0.16
RTF1-201ENST00000389629 BANK1Q8NDB2 785 aa16.03■□□□□ 0.16
RTF1-201ENST00000389629 SAMM50Q9Y512 469 aa16.03■□□□□ 0.16
RTF1-201ENST00000389629 SALL3Q9BXA9 1300 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms