RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 FAM196BA6NMK8 535 aa11.84□□□□□ -0.51
LTN1-203ENST00000389195 BTBD18B2RXH4 712 aa11.84□□□□□ -0.51
LTN1-203ENST00000389195 HMGN5P82970 282 aaKnown RBP11.84□□□□□ -0.51
LTN1-203ENST00000389195 SHROOM1Q2M3G4 852 aaPredicted RBP11.84□□□□□ -0.51
LTN1-203ENST00000389195 KRT40Q6A162 431 aa11.84□□□□□ -0.51
LTN1-203ENST00000389195 C2CD5Q86YS7 1000 aa11.84□□□□□ -0.51
LTN1-203ENST00000389195 CRNKL1Q9BZJ0 848 aaKnown RBP11.84□□□□□ -0.51
LTN1-203ENST00000389195 PPP1R1BQ9UD71 204 aaPredicted RBP11.84□□□□□ -0.51
LTN1-203ENST00000389195 ERICH2A1L162 156 aa11.83□□□□□ -0.52
LTN1-203ENST00000389195 TSPY2A6NKD2 308 aa11.83□□□□□ -0.52
LTN1-203ENST00000389195 BBOX1O75936 387 aa11.83□□□□□ -0.52
LTN1-203ENST00000389195 GOLGA8HP0CJ92 632 aa11.83□□□□□ -0.52
LTN1-203ENST00000389195 TFAP4Q01664 338 aa11.83□□□□□ -0.52
LTN1-203ENST00000389195 DPP8Q6V1X1 898 aaPredicted RBP11.83□□□□□ -0.52
LTN1-203ENST00000389195 KIAA0825Q8IV33 1275 aa11.83□□□□□ -0.52
LTN1-203ENST00000389195 FANCBQ8NB91 859 aa11.83□□□□□ -0.52
LTN1-203ENST00000389195 TMEM87AQ8NBN3 555 aa11.83□□□□□ -0.52
LTN1-203ENST00000389195 ZSCAN10Q96SZ4 725 aaPredicted RBP11.83□□□□□ -0.52
LTN1-203ENST00000389195 BRIP1Q9BX63 1249 aa11.83□□□□□ -0.52
LTN1-203ENST00000389195 ZC3H12CQ9C0D7 883 aaKnown RBP11.83□□□□□ -0.52
LTN1-203ENST00000389195 G3V3G9 751 aa11.83□□□□□ -0.52
LTN1-203ENST00000389195 PTMSP20962 102 aa11.83□□□□□ -0.52
LTN1-203ENST00000389195 SEC23AQ15436 765 aa11.83□□□□□ -0.52
LTN1-203ENST00000389195 RTN1Q16799 776 aa11.83□□□□□ -0.52
LTN1-203ENST00000389195 IFIT1BQ5T764 474 aaKnown RBP11.83□□□□□ -0.52
LTN1-203ENST00000389195 DCAF8Q5TAQ9 597 aa11.83□□□□□ -0.52
LTN1-203ENST00000389195 ISM2Q6H9L7 571 aa11.83□□□□□ -0.52
LTN1-203ENST00000389195 ESR2Q92731 530 aa11.83□□□□□ -0.52
LTN1-203ENST00000389195 TMEM87BQ96K49 555 aa11.83□□□□□ -0.52
LTN1-203ENST00000389195 IL17RBQ9NRM6 502 aa11.83□□□□□ -0.52
LTN1-203ENST00000389195 VPS54Q9P1Q0 977 aa11.83□□□□□ -0.52
LTN1-203ENST00000389195 V9GY48 417 aaPredicted RBP11.83□□□□□ -0.52
LTN1-203ENST00000389195 CENPFP49454 3210 aa11.83□□□□□ -0.52
LTN1-203ENST00000389195 TCP10Q12799 353 aa11.82□□□□□ -0.52
LTN1-203ENST00000389195 WDR66Q8TBY9 1149 aa11.82□□□□□ -0.52
LTN1-203ENST00000389195 CLIC6Q96NY7 704 aa11.82□□□□□ -0.52
LTN1-203ENST00000389195 RTFDC1Q9BY42 306 aaPredicted RBP11.82□□□□□ -0.52
LTN1-203ENST00000389195 STX8Q9UNK0 236 aa11.82□□□□□ -0.52
LTN1-203ENST00000389195 C21orf2O43822 256 aa11.82□□□□□ -0.52
LTN1-203ENST00000389195 HOXA10P31260 410 aaPredicted RBP11.82□□□□□ -0.52
LTN1-203ENST00000389195 GNL2Q13823 731 aaKnown RBP11.82□□□□□ -0.52
LTN1-203ENST00000389195 SGMS1Q86VZ5 419 aa11.82□□□□□ -0.52
LTN1-203ENST00000389195 ZFPM1Q8IX07 1006 aa11.82□□□□□ -0.52
LTN1-203ENST00000389195 STAG2Q8N3U4 1231 aa11.82□□□□□ -0.52
LTN1-203ENST00000389195 ATP6V0A2Q9Y487 856 aa11.82□□□□□ -0.52
LTN1-203ENST00000389195 DHX16O60231 1041 aaKnown RBP11.81□□□□□ -0.52
LTN1-203ENST00000389195 ATP2B4P23634 1241 aa11.81□□□□□ -0.52
LTN1-203ENST00000389195 KIF23Q02241 960 aaPredicted RBP11.81□□□□□ -0.52
LTN1-203ENST00000389195 SLC15A2Q16348 729 aa11.81□□□□□ -0.52
LTN1-203ENST00000389195 EARS2Q5JPH6 523 aaKnown RBP11.81□□□□□ -0.52
LTN1-203ENST00000389195 CCDC183Q5T5S1 534 aa11.81□□□□□ -0.52
LTN1-203ENST00000389195 SYNE3Q6ZMZ3 975 aa11.81□□□□□ -0.52
LTN1-203ENST00000389195 TICAM2Q86XR7 235 aa11.81□□□□□ -0.52
LTN1-203ENST00000389195 CCAR1Q8IX12 1150 aaKnown RBP11.81□□□□□ -0.52
LTN1-203ENST00000389195 KLHL34Q8N239 644 aa11.81□□□□□ -0.52
LTN1-203ENST00000389195 CNNM2Q9H8M5 875 aa11.81□□□□□ -0.52
LTN1-203ENST00000389195 MKNK2Q9HBH9 465 aa11.81□□□□□ -0.52
LTN1-203ENST00000389195 PCDHA7Q9UN72 937 aa11.81□□□□□ -0.52
LTN1-203ENST00000389195 TTF2Q9UNY4 1162 aaKnown RBP11.81□□□□□ -0.52
LTN1-203ENST00000389195 WNT7AO00755 349 aa11.81□□□□□ -0.52
LTN1-203ENST00000389195 GRIN1Q05586 938 aa11.81□□□□□ -0.52
LTN1-203ENST00000389195 SART3Q15020 963 aaKnown RBP11.81□□□□□ -0.52
LTN1-203ENST00000389195 TEX11Q8IYF3 940 aa11.81□□□□□ -0.52
LTN1-203ENST00000389195 FBXL16Q8N461 479 aa11.81□□□□□ -0.52
LTN1-203ENST00000389195 TSPY26PQ9H489 355 aa11.81□□□□□ -0.52
LTN1-203ENST00000389195 RRAGDQ9NQL2 400 aaPredicted RBP11.81□□□□□ -0.52
LTN1-203ENST00000389195 SEMA3EO15041 775 aa11.8□□□□□ -0.52
LTN1-203ENST00000389195 LIFRP42702 1097 aa11.8□□□□□ -0.52
LTN1-203ENST00000389195 SSRP1Q08945 709 aaKnown RBP11.8□□□□□ -0.52
LTN1-203ENST00000389195 NFIAQ12857 509 aa11.8□□□□□ -0.52
LTN1-203ENST00000389195 AOC3Q16853 763 aa11.8□□□□□ -0.52
LTN1-203ENST00000389195 CAMKK2Q96RR4 588 aa11.8□□□□□ -0.52
LTN1-203ENST00000389195 SCAND2PQ9GZW5 306 aaPredicted RBP11.8□□□□□ -0.52
LTN1-203ENST00000389195 DDX4Q9NQI0 724 aaKnown RBP11.8□□□□□ -0.52
LTN1-203ENST00000389195 ANKRD31Q8N7Z5 1873 aa11.8□□□□□ -0.52
LTN1-203ENST00000389195 WDHD1O75717 1129 aaPredicted RBP11.8□□□□□ -0.52
LTN1-203ENST00000389195 ZBTB7AO95365 584 aa11.8□□□□□ -0.52
LTN1-203ENST00000389195 RBM5P52756 815 aaKnown RBP eCLIP11.8□□□□□ -0.52
LTN1-203ENST00000389195 SF3A1Q15459 793 aaKnown RBP11.8□□□□□ -0.52
LTN1-203ENST00000389195 SP8Q8IXZ3 490 aa11.8□□□□□ -0.52
LTN1-203ENST00000389195 CRAMP1Q96RY5 1269 aa11.8□□□□□ -0.52
LTN1-203ENST00000389195 MKRN1Q9UHC7 482 aaKnown RBP11.8□□□□□ -0.52
LTN1-203ENST00000389195 USP25Q9UHP3 1055 aa11.8□□□□□ -0.52
LTN1-203ENST00000389195 KLRG2A4D1S0 409 aaPredicted RBP11.8□□□□□ -0.52
LTN1-203ENST00000389195 AP5Z1O43299 807 aa11.8□□□□□ -0.52
LTN1-203ENST00000389195 IL1R1P14778 569 aa11.8□□□□□ -0.52
LTN1-203ENST00000389195 C12orf60Q5U649 245 aa11.8□□□□□ -0.52
LTN1-203ENST00000389195 MYSM1Q5VVJ2 828 aa11.8□□□□□ -0.52
LTN1-203ENST00000389195 RCSD1Q6JBY9 416 aa11.8□□□□□ -0.52
LTN1-203ENST00000389195 CRACR2BQ8N4Y2 399 aaPredicted RBP11.8□□□□□ -0.52
LTN1-203ENST00000389195 SRBD1Q8N5C6 995 aaKnown RBP11.8□□□□□ -0.52
LTN1-203ENST00000389195 RNF41Q9H4P4 317 aaPredicted RBP11.8□□□□□ -0.52
LTN1-203ENST00000389195 ZSCAN16Q9H4T2 348 aaPredicted RBP11.8□□□□□ -0.52
LTN1-203ENST00000389195 DAGLAQ9Y4D2 1042 aa11.8□□□□□ -0.52
LTN1-203ENST00000389195 MROH7-TTC4A0A0A0MT08 1334 aa11.79□□□□□ -0.52
LTN1-203ENST00000389195 RGL2O15211 777 aa11.79□□□□□ -0.52
LTN1-203ENST00000389195 RAD21O60216 631 aa11.79□□□□□ -0.52
LTN1-203ENST00000389195 NPR1P16066 1061 aa11.79□□□□□ -0.52
LTN1-203ENST00000389195 RHBDL3P58872 404 aa11.79□□□□□ -0.52
LTN1-203ENST00000389195 TROAPQ12815 778 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms