RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 SEC24CP53992 1094 aa16.96■□□□□ 0.31
VLDLR-202ENST00000382099 WDR93Q6P2C0 686 aa16.96■□□□□ 0.31
VLDLR-202ENST00000382099 PPP1R42Q7Z4L9 355 aa16.96■□□□□ 0.31
VLDLR-202ENST00000382099 ATP6V0A4Q9HBG4 840 aa16.96■□□□□ 0.31
VLDLR-202ENST00000382099 AKR1B15C9JRZ8 316 aaPredicted RBP16.96■□□□□ 0.31
VLDLR-202ENST00000382099 SLC8A1P32418 973 aa16.96■□□□□ 0.31
VLDLR-202ENST00000382099 RANBP1P43487 201 aa16.96■□□□□ 0.31
VLDLR-202ENST00000382099 ADALQ6DHV7 355 aa16.96■□□□□ 0.31
VLDLR-202ENST00000382099 OTUD7BQ6GQQ9 843 aa16.96■□□□□ 0.31
VLDLR-202ENST00000382099 CCDC50Q8IVM0 306 aa16.96■□□□□ 0.31
VLDLR-202ENST00000382099 OPLAHO14841 1288 aa16.95■□□□□ 0.3
VLDLR-202ENST00000382099 ABL1P00519 1130 aa16.95■□□□□ 0.3
VLDLR-202ENST00000382099 USP14P54578 494 aa16.95■□□□□ 0.3
VLDLR-202ENST00000382099 MRPS25P82663 173 aaKnown RBP16.95■□□□□ 0.3
VLDLR-202ENST00000382099 GUCY1A3Q02108 690 aa16.95■□□□□ 0.3
VLDLR-202ENST00000382099 TRIM74Q86UV6 250 aa16.95■□□□□ 0.3
VLDLR-202ENST00000382099 TRIM73Q86UV7 250 aa16.95■□□□□ 0.3
VLDLR-202ENST00000382099 HSD3B7Q9H2F3 369 aa16.95■□□□□ 0.3
VLDLR-202ENST00000382099 INTS13Q9NVM9 706 aa16.95■□□□□ 0.3
VLDLR-202ENST00000382099 MARCKSP29966 332 aaPredicted RBP16.95■□□□□ 0.3
VLDLR-202ENST00000382099 PNOCQ13519 176 aa16.95■□□□□ 0.3
VLDLR-202ENST00000382099 NAA35Q5VZE5 725 aa16.95■□□□□ 0.3
VLDLR-202ENST00000382099 SPATS2Q86XZ4 545 aaKnown RBP16.95■□□□□ 0.3
VLDLR-202ENST00000382099 TRMT44Q8IYL2 757 aaKnown RBP16.95■□□□□ 0.3
VLDLR-202ENST00000382099 NSMCE1Q8WV22 266 aa16.95■□□□□ 0.3
VLDLR-202ENST00000382099 GUCA1BQ9UMX6 200 aa16.95■□□□□ 0.3
VLDLR-202ENST00000382099 SETD1AO15047 1707 aaKnown RBP16.95■□□□□ 0.3
VLDLR-202ENST00000382099 SRGAP2O75044 1071 aa16.94■□□□□ 0.3
VLDLR-202ENST00000382099 NMIQ13287 307 aaPredicted RBP16.94■□□□□ 0.3
VLDLR-202ENST00000382099 TUBB2AQ13885 445 aa16.94■□□□□ 0.3
VLDLR-202ENST00000382099 TUBB2BQ9BVA1 445 aa16.94■□□□□ 0.3
VLDLR-202ENST00000382099 HDAC6Q9UBN7 1215 aa16.94■□□□□ 0.3
VLDLR-202ENST00000382099 EDC4Q6P2E9 1401 aaKnown RBP16.94■□□□□ 0.3
VLDLR-202ENST00000382099 ICA1Q05084 483 aa16.94■□□□□ 0.3
VLDLR-202ENST00000382099 ARL8AQ96BM9 186 aa16.94■□□□□ 0.3
VLDLR-202ENST00000382099 CLIC4Q9Y696 253 aa16.94■□□□□ 0.3
VLDLR-202ENST00000382099 PTPDC1A2A3K4 754 aa16.94■□□□□ 0.3
VLDLR-202ENST00000382099 E7EVH7 732 aa16.94■□□□□ 0.3
VLDLR-202ENST00000382099 OPA1O60313 960 aa16.94■□□□□ 0.3
VLDLR-202ENST00000382099 FUKQ8N0W3 1084 aa16.94■□□□□ 0.3
VLDLR-202ENST00000382099 HDLBPQ00341 1268 aaKnown RBP16.93■□□□□ 0.3
VLDLR-202ENST00000382099 FAM228AQ86W67 206 aa16.93■□□□□ 0.3
VLDLR-202ENST00000382099 ZNF473Q8WTR7 871 aaKnown RBP16.93■□□□□ 0.3
VLDLR-202ENST00000382099 PPANQ9NQ55 473 aaKnown RBP16.93■□□□□ 0.3
VLDLR-202ENST00000382099 BIN2Q9UBW5 565 aaPredicted RBP16.93■□□□□ 0.3
VLDLR-202ENST00000382099 GOLGA8KD6RF30 607 aa16.93■□□□□ 0.3
VLDLR-202ENST00000382099 GNPTABQ3T906 1256 aa16.93■□□□□ 0.3
VLDLR-202ENST00000382099 RCSD1Q6JBY9 416 aa16.93■□□□□ 0.3
VLDLR-202ENST00000382099 NCOA5Q9HCD5 579 aaKnown RBP16.93■□□□□ 0.3
VLDLR-202ENST00000382099 ADGRL3Q9HAR2 1447 aa16.93■□□□□ 0.3
VLDLR-202ENST00000382099 SPTLC2O15270 562 aa16.92■□□□□ 0.3
VLDLR-202ENST00000382099 NBPF7P0C2Y1 421 aaPredicted RBP16.92■□□□□ 0.3
VLDLR-202ENST00000382099 SYNE3Q6ZMZ3 975 aa16.92■□□□□ 0.3
VLDLR-202ENST00000382099 DLC1Q96QB1 1528 aa16.92■□□□□ 0.3
VLDLR-202ENST00000382099 SLC8A3P57103 927 aa16.92■□□□□ 0.3
VLDLR-202ENST00000382099 NUDT16Q96DE0 195 aaKnown RBP16.92■□□□□ 0.3
VLDLR-202ENST00000382099 RRP36Q96EU6 259 aaKnown RBP16.92■□□□□ 0.3
VLDLR-202ENST00000382099 STAMBPL1Q96FJ0 436 aa16.92■□□□□ 0.3
VLDLR-202ENST00000382099 NFE2L3Q9Y4A8 694 aa16.92■□□□□ 0.3
VLDLR-202ENST00000382099 ANKRD18BA2A2Z9 1011 aa16.92■□□□□ 0.3
VLDLR-202ENST00000382099 PFKFB1P16118 471 aa16.92■□□□□ 0.3
VLDLR-202ENST00000382099 MATR3P43243 847 aaKnown RBP eCLIP16.92■□□□□ 0.3
VLDLR-202ENST00000382099 SYKP43405 635 aa16.92■□□□□ 0.3
VLDLR-202ENST00000382099 SF3A3Q12874 501 aaKnown RBP eCLIP16.92■□□□□ 0.3
VLDLR-202ENST00000382099 PDCD2Q16342 344 aaPredicted RBP16.92■□□□□ 0.3
VLDLR-202ENST00000382099 MSL1Q68DK7 614 aa16.92■□□□□ 0.3
VLDLR-202ENST00000382099 KLHL23Q8NBE8 558 aa16.92■□□□□ 0.3
VLDLR-202ENST00000382099 SPAG5Q96R06 1193 aa16.92■□□□□ 0.3
VLDLR-202ENST00000382099 MMS19Q96T76 1030 aa16.92■□□□□ 0.3
VLDLR-202ENST00000382099 FSD1Q9BTV5 496 aa16.92■□□□□ 0.3
VLDLR-202ENST00000382099 UPP2O95045 317 aa16.91■□□□□ 0.3
VLDLR-202ENST00000382099 RAB27AP51159 221 aa16.91■□□□□ 0.3
VLDLR-202ENST00000382099 USP4Q13107 963 aa16.91■□□□□ 0.3
VLDLR-202ENST00000382099 CCDC70Q6NSX1 233 aa16.91■□□□□ 0.3
VLDLR-202ENST00000382099 HSF2BPO75031 334 aa16.91■□□□□ 0.3
VLDLR-202ENST00000382099 LSP1P33241 339 aa16.91■□□□□ 0.3
VLDLR-202ENST00000382099 TLDC1Q6P9B6 456 aa16.91■□□□□ 0.3
VLDLR-202ENST00000382099 ARHGEF25Q86VW2 580 aa16.91■□□□□ 0.3
VLDLR-202ENST00000382099 CLASRPQ8N2M8 674 aaKnown RBP16.91■□□□□ 0.3
VLDLR-202ENST00000382099 RASSF8Q8NHQ8 419 aa16.91■□□□□ 0.3
VLDLR-202ENST00000382099 COG3Q96JB2 828 aa16.91■□□□□ 0.3
VLDLR-202ENST00000382099 ZCWPW1Q9H0M4 648 aa16.91■□□□□ 0.3
VLDLR-202ENST00000382099 MAP4K1Q92918 833 aa16.91■□□□□ 0.3
VLDLR-202ENST00000382099 PICK1Q9NRD5 415 aa16.91■□□□□ 0.3
VLDLR-202ENST00000382099 ZC3H4Q9UPT8 1303 aaKnown RBP16.9■□□□□ 0.3
VLDLR-202ENST00000382099 WASLO00401 505 aaPredicted RBP16.9■□□□□ 0.3
VLDLR-202ENST00000382099 APBA1Q02410 837 aa16.9■□□□□ 0.3
VLDLR-202ENST00000382099 USHBP1Q8N6Y0 703 aa16.9■□□□□ 0.3
VLDLR-202ENST00000382099 NEK1Q96PY6 1258 aa16.9■□□□□ 0.3
VLDLR-202ENST00000382099 CCT8L2Q96SF2 557 aa16.9■□□□□ 0.3
VLDLR-202ENST00000382099 SLC39A2Q9NP94 309 aa16.9■□□□□ 0.3
VLDLR-202ENST00000382099 TSPYL4Q9UJ04 414 aa16.9■□□□□ 0.3
VLDLR-202ENST00000382099 PES1O00541 588 aaKnown RBP16.9■□□□□ 0.3
VLDLR-202ENST00000382099 RBL2Q08999 1139 aa16.9■□□□□ 0.3
VLDLR-202ENST00000382099 PNMA8AQ86V59 439 aaPredicted RBP16.9■□□□□ 0.3
VLDLR-202ENST00000382099 GPATCH3Q96I76 525 aa16.9■□□□□ 0.3
VLDLR-202ENST00000382099 SLF1Q9BQI6 1058 aa16.9■□□□□ 0.3
VLDLR-202ENST00000382099 NAA16Q6N069 864 aaPredicted RBP16.89■□□□□ 0.29
VLDLR-202ENST00000382099 TRPC6Q9Y210 931 aa16.89■□□□□ 0.29
VLDLR-202ENST00000382099 HPDP32754 393 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms