RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 BAZ2AQ9UIF9 1905 aaKnown RBP18.45■□□□□ 0.54
PDGFB-202ENST00000381551 FKBP1BP68106 108 aa18.45■□□□□ 0.54
PDGFB-202ENST00000381551 PRKG1Q13976 671 aa18.45■□□□□ 0.54
PDGFB-202ENST00000381551 AMOTL1Q8IY63 956 aa18.45■□□□□ 0.54
PDGFB-202ENST00000381551 C2orf69Q8N8R5 385 aa18.45■□□□□ 0.54
PDGFB-202ENST00000381551 GBA2Q9HCG7 927 aaPredicted RBP18.45■□□□□ 0.54
PDGFB-202ENST00000381551 HERC5Q9UII4 1024 aaKnown RBP18.45■□□□□ 0.54
PDGFB-202ENST00000381551 ZMYM6O95789 1325 aa18.45■□□□□ 0.54
PDGFB-202ENST00000381551 FAM196BA6NMK8 535 aa18.44■□□□□ 0.54
PDGFB-202ENST00000381551 GABPAQ06546 454 aa18.44■□□□□ 0.54
PDGFB-202ENST00000381551 MAP3K11Q16584 847 aa18.44■□□□□ 0.54
PDGFB-202ENST00000381551 MOB2Q70IA6 237 aa18.44■□□□□ 0.54
PDGFB-202ENST00000381551 KLRG1Q96E93 195 aa18.44■□□□□ 0.54
PDGFB-202ENST00000381551 ZNF341Q9BYN7 854 aa18.44■□□□□ 0.54
PDGFB-202ENST00000381551 DNAJC18Q9H819 358 aa18.44■□□□□ 0.54
PDGFB-202ENST00000381551 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.44■□□□□ 0.54
PDGFB-202ENST00000381551 CTNNA3Q9UI47 895 aa18.44■□□□□ 0.54
PDGFB-202ENST00000381551 ZNF112Q9UJU3 913 aa18.44■□□□□ 0.54
PDGFB-202ENST00000381551 TAOK2Q9UL54 1235 aa18.44■□□□□ 0.54
PDGFB-202ENST00000381551 ANGEL1Q9UNK9 670 aaKnown RBP18.44■□□□□ 0.54
PDGFB-202ENST00000381551 NAV1Q8NEY1 1877 aa18.43■□□□□ 0.54
PDGFB-202ENST00000381551 DDX60LQ5H9U9 1706 aaKnown RBP18.43■□□□□ 0.54
PDGFB-202ENST00000381551 TMEM88BA6NKF7 163 aa18.43■□□□□ 0.54
PDGFB-202ENST00000381551 PHF20L1A8MW92 1017 aa18.43■□□□□ 0.54
PDGFB-202ENST00000381551 APLP1P51693 650 aa18.43■□□□□ 0.54
PDGFB-202ENST00000381551 PPARAQ07869 468 aa18.43■□□□□ 0.54
PDGFB-202ENST00000381551 TTLL12Q14166 644 aaPredicted RBP18.43■□□□□ 0.54
PDGFB-202ENST00000381551 CRACR2BQ8N4Y2 399 aaPredicted RBP18.43■□□□□ 0.54
PDGFB-202ENST00000381551 DYNLL2Q96FJ2 89 aa18.43■□□□□ 0.54
PDGFB-202ENST00000381551 ANO2Q9NQ90 1003 aa18.43■□□□□ 0.54
PDGFB-202ENST00000381551 ANAPC4Q9UJX5 808 aa18.43■□□□□ 0.54
PDGFB-202ENST00000381551 TRPM7Q96QT4 1865 aa18.43■□□□□ 0.54
PDGFB-202ENST00000381551 UBE2Q2LH0YL09 131 aa18.42■□□□□ 0.54
PDGFB-202ENST00000381551 LDLRAD1Q5T700 205 aa18.42■□□□□ 0.54
PDGFB-202ENST00000381551 TATDN1Q6P1N9 297 aa18.42■□□□□ 0.54
PDGFB-202ENST00000381551 ARMC9Q7Z3E5 817 aa18.42■□□□□ 0.54
PDGFB-202ENST00000381551 U3KPZ7 1027 aaPredicted RBP18.42■□□□□ 0.54
PDGFB-202ENST00000381551 SIPA1L1O43166 1804 aa18.42■□□□□ 0.54
PDGFB-202ENST00000381551 ZNF213O14771 459 aa18.41■□□□□ 0.54
PDGFB-202ENST00000381551 SHMT1P34896 483 aa18.41■□□□□ 0.54
PDGFB-202ENST00000381551 IREB2P48200 963 aaKnown RBP18.41■□□□□ 0.54
PDGFB-202ENST00000381551 MAP3K9P80192 1104 aa18.41■□□□□ 0.54
PDGFB-202ENST00000381551 RRP1BQ14684 758 aaKnown RBP18.41■□□□□ 0.54
PDGFB-202ENST00000381551 C16orf86Q6ZW13 317 aa18.41■□□□□ 0.54
PDGFB-202ENST00000381551 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.41■□□□□ 0.54
PDGFB-202ENST00000381551 TRIM34Q9BYJ4 488 aa18.41■□□□□ 0.54
PDGFB-202ENST00000381551 SWAP70Q9UH65 585 aa18.41■□□□□ 0.54
PDGFB-202ENST00000381551 CEP350Q5VT06 3117 aa18.4■□□□□ 0.54
PDGFB-202ENST00000381551 UNCXA6NJT0 531 aa18.4■□□□□ 0.54
PDGFB-202ENST00000381551 REC8O95072 547 aa18.4■□□□□ 0.54
PDGFB-202ENST00000381551 CDK8P49336 464 aa18.4■□□□□ 0.54
PDGFB-202ENST00000381551 HAND2P61296 217 aa18.4■□□□□ 0.54
PDGFB-202ENST00000381551 CTDSPL2Q05D32 466 aa18.4■□□□□ 0.54
PDGFB-202ENST00000381551 C8orf34Q49A92 452 aa18.4■□□□□ 0.54
PDGFB-202ENST00000381551 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.4■□□□□ 0.54
PDGFB-202ENST00000381551 SAPCD2Q86UD0 394 aa18.4■□□□□ 0.54
PDGFB-202ENST00000381551 SLC44A5Q8NCS7 719 aa18.4■□□□□ 0.54
PDGFB-202ENST00000381551 WRNIP1Q96S55 665 aa18.4■□□□□ 0.54
PDGFB-202ENST00000381551 RBM8AQ9Y5S9 174 aaKnown RBP18.4■□□□□ 0.54
PDGFB-202ENST00000381551 CTNND1O60716 968 aaKnown RBP18.39■□□□□ 0.53
PDGFB-202ENST00000381551 SLC3A2P08195 630 aaKnown RBP18.39■□□□□ 0.53
PDGFB-202ENST00000381551 FGRP09769 529 aa18.39■□□□□ 0.53
PDGFB-202ENST00000381551 NECTIN1Q15223 517 aa18.39■□□□□ 0.53
PDGFB-202ENST00000381551 IMMTQ16891 758 aaKnown RBP18.39■□□□□ 0.53
PDGFB-202ENST00000381551 ANKRD13AQ8IZ07 590 aa18.39■□□□□ 0.53
PDGFB-202ENST00000381551 STK11IPQ8N1F8 1099 aa18.39■□□□□ 0.53
PDGFB-202ENST00000381551 ZKSCAN4Q969J2 545 aaPredicted RBP18.39■□□□□ 0.53
PDGFB-202ENST00000381551 NBPF3Q9H094 633 aa18.39■□□□□ 0.53
PDGFB-202ENST00000381551 INCENPQ9NQS7 918 aa18.39■□□□□ 0.53
PDGFB-202ENST00000381551 CREBZFQ9NS37 354 aa18.39■□□□□ 0.53
PDGFB-202ENST00000381551 TACC3Q9Y6A5 838 aa18.39■□□□□ 0.53
PDGFB-202ENST00000381551 TLL2Q9Y6L7 1015 aa18.39■□□□□ 0.53
PDGFB-202ENST00000381551 ROBO3Q96MS0 1386 aa18.39■□□□□ 0.53
PDGFB-202ENST00000381551 CYP21A2P08686 494 aa18.38■□□□□ 0.53
PDGFB-202ENST00000381551 INPP5BP32019 993 aa18.38■□□□□ 0.53
PDGFB-202ENST00000381551 CAP2P40123 477 aa18.38■□□□□ 0.53
PDGFB-202ENST00000381551 HUNKP57058 714 aa18.38■□□□□ 0.53
PDGFB-202ENST00000381551 CERKLQ49MI3 558 aaPredicted RBP18.38■□□□□ 0.53
PDGFB-202ENST00000381551 PAPPA2Q9BXP8 1791 aa18.37■□□□□ 0.53
PDGFB-202ENST00000381551 EPB41L2O43491 1005 aaKnown RBP18.37■□□□□ 0.53
PDGFB-202ENST00000381551 SEC24BO95487 1268 aa18.37■□□□□ 0.53
PDGFB-202ENST00000381551 JAG1P78504 1218 aa18.37■□□□□ 0.53
PDGFB-202ENST00000381551 PDE4BQ07343 736 aa18.37■□□□□ 0.53
PDGFB-202ENST00000381551 VGLL4Q14135 290 aa18.37■□□□□ 0.53
PDGFB-202ENST00000381551 USP26Q9BXU7 913 aa18.37■□□□□ 0.53
PDGFB-202ENST00000381551 MKNK2Q9HBH9 465 aa18.37■□□□□ 0.53
PDGFB-202ENST00000381551 ZNF287Q9HBT7 754 aa18.37■□□□□ 0.53
PDGFB-202ENST00000381551 EIF5BO60841 1220 aaKnown RBP18.36■□□□□ 0.53
PDGFB-202ENST00000381551 PRDM1O75626 825 aa18.36■□□□□ 0.53
PDGFB-202ENST00000381551 RASA1P20936 1047 aa18.36■□□□□ 0.53
PDGFB-202ENST00000381551 NOL9Q5SY16 702 aaKnown RBP18.36■□□□□ 0.53
PDGFB-202ENST00000381551 AKNAD1Q5T1N1 836 aa18.36■□□□□ 0.53
PDGFB-202ENST00000381551 MFSD6Q6ZSS7 791 aa18.36■□□□□ 0.53
PDGFB-202ENST00000381551 TBC1D10CQ8IV04 446 aa18.36■□□□□ 0.53
PDGFB-202ENST00000381551 HHIPL1Q96JK4 782 aa18.36■□□□□ 0.53
PDGFB-202ENST00000381551 CLMNQ96JQ2 1002 aa18.36■□□□□ 0.53
PDGFB-202ENST00000381551 ABT1Q9ULW3 272 aaKnown RBP18.36■□□□□ 0.53
PDGFB-202ENST00000381551 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.36■□□□□ 0.53
PDGFB-202ENST00000381551 PCP11498 1178 aaKnown RBP18.35■□□□□ 0.53
PDGFB-202ENST00000381551 HSPA6P17066 643 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms