RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 SLC52A1Q9NWF4 448 aa11.99□□□□□ -0.49
CLCN4-202ENST00000380833 FGD6Q6ZV73 1430 aa11.99□□□□□ -0.49
CLCN4-202ENST00000380833 N4BP3O15049 544 aa11.98□□□□□ -0.49
CLCN4-202ENST00000380833 CFAP157Q5JU67 520 aa11.98□□□□□ -0.49
CLCN4-202ENST00000380833 SLC30A9Q6PML9 568 aa11.98□□□□□ -0.49
CLCN4-202ENST00000380833 DHX58Q96C10 678 aa11.98□□□□□ -0.49
CLCN4-202ENST00000380833 NBPF7P0C2Y1 421 aaPredicted RBP11.98□□□□□ -0.49
CLCN4-202ENST00000380833 STX17P56962 302 aa11.98□□□□□ -0.49
CLCN4-202ENST00000380833 CUL3Q13618 768 aa11.98□□□□□ -0.49
CLCN4-202ENST00000380833 FBXO18Q8NFZ0 1043 aa11.98□□□□□ -0.49
CLCN4-202ENST00000380833 NCOA7Q8NI08 942 aa11.98□□□□□ -0.49
CLCN4-202ENST00000380833 GFM2Q969S9 779 aaKnown RBP11.98□□□□□ -0.49
CLCN4-202ENST00000380833 DBF4Q9UBU7 674 aaPredicted RBP11.98□□□□□ -0.49
CLCN4-202ENST00000380833 MAGEB6P1A0A0J9YX57 407 aa11.98□□□□□ -0.49
CLCN4-202ENST00000380833 SNX16P57768 344 aa11.98□□□□□ -0.49
CLCN4-202ENST00000380833 MAP3K21Q5TCX8 1036 aa11.98□□□□□ -0.49
CLCN4-202ENST00000380833 PICK1Q9NRD5 415 aa11.98□□□□□ -0.49
CLCN4-202ENST00000380833 RBSNQ9H1K0 784 aa11.98□□□□□ -0.49
CLCN4-202ENST00000380833 MAGI1Q96QZ7 1491 aaPredicted RBP11.98□□□□□ -0.49
CLCN4-202ENST00000380833 AKR1B10O60218 316 aa11.98□□□□□ -0.49
CLCN4-202ENST00000380833 TROVE2P10155 538 aaKnown RBP eCLIP11.98□□□□□ -0.49
CLCN4-202ENST00000380833 GUCY2CP25092 1073 aa11.98□□□□□ -0.49
CLCN4-202ENST00000380833 CPXCR1Q8N123 301 aa11.98□□□□□ -0.49
CLCN4-202ENST00000380833 ERMNQ8TAM6 284 aa11.98□□□□□ -0.49
CLCN4-202ENST00000380833 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.98□□□□□ -0.49
CLCN4-202ENST00000380833 SH2B1Q9NRF2 756 aaPredicted RBP11.98□□□□□ -0.49
CLCN4-202ENST00000380833 CCDC169A6NNP5 214 aa11.97□□□□□ -0.49
CLCN4-202ENST00000380833 NUDCD3Q8IVD9 361 aa11.97□□□□□ -0.49
CLCN4-202ENST00000380833 MAP7D3Q8IWC1 876 aa11.97□□□□□ -0.49
CLCN4-202ENST00000380833 ARHGAP18Q8N392 663 aa11.97□□□□□ -0.49
CLCN4-202ENST00000380833 CRCPO75575 148 aa11.97□□□□□ -0.49
CLCN4-202ENST00000380833 NBPF20Q3BBV1 942 aa11.97□□□□□ -0.49
CLCN4-202ENST00000380833 COPS6Q7L5N1 327 aa11.97□□□□□ -0.49
CLCN4-202ENST00000380833 FBXO41Q8TF61 875 aa11.97□□□□□ -0.49
CLCN4-202ENST00000380833 PLB1Q6P1J6 1458 aa11.97□□□□□ -0.49
CLCN4-202ENST00000380833 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.97□□□□□ -0.49
CLCN4-202ENST00000380833 CCDC159P0C7I6 412 aa11.97□□□□□ -0.49
CLCN4-202ENST00000380833 RAPGEF1Q13905 1077 aa11.97□□□□□ -0.49
CLCN4-202ENST00000380833 PPANQ9NQ55 473 aaKnown RBP11.97□□□□□ -0.49
CLCN4-202ENST00000380833 HGSO14964 777 aaPredicted RBP11.97□□□□□ -0.49
CLCN4-202ENST00000380833 LONP1P36776 959 aaKnown RBP11.97□□□□□ -0.49
CLCN4-202ENST00000380833 KRT83P78385 493 aa11.97□□□□□ -0.49
CLCN4-202ENST00000380833 SLC9C2Q5TAH2 1124 aa11.97□□□□□ -0.49
CLCN4-202ENST00000380833 CROCCP2Q86T23 111 aa11.97□□□□□ -0.49
CLCN4-202ENST00000380833 KSR1Q8IVT5 923 aa11.97□□□□□ -0.49
CLCN4-202ENST00000380833 C6orf50Q9HD87 102 aa11.97□□□□□ -0.49
CLCN4-202ENST00000380833 ELP1O95163 1332 aa11.97□□□□□ -0.49
CLCN4-202ENST00000380833 KRT86O43790 486 aa11.97□□□□□ -0.49
CLCN4-202ENST00000380833 DTNBO60941 627 aa11.97□□□□□ -0.49
CLCN4-202ENST00000380833 DEUP1Q05D60 604 aa11.97□□□□□ -0.49
CLCN4-202ENST00000380833 BIRC3Q13489 604 aa11.97□□□□□ -0.49
CLCN4-202ENST00000380833 USH1GQ495M9 461 aa11.97□□□□□ -0.49
CLCN4-202ENST00000380833 TTC30BQ8N4P2 665 aa11.97□□□□□ -0.49
CLCN4-202ENST00000380833 MSANTD4Q8NCY6 345 aa11.97□□□□□ -0.49
CLCN4-202ENST00000380833 CTAGE1Q96RT6 745 aa11.97□□□□□ -0.49
CLCN4-202ENST00000380833 PPP1R9BQ96SB3 815 aa11.97□□□□□ -0.49
CLCN4-202ENST00000380833 C4orf50Q6ZRC1 276 aa11.97□□□□□ -0.49
CLCN4-202ENST00000380833 TRIM58Q8NG06 486 aa11.97□□□□□ -0.49
CLCN4-202ENST00000380833 CEP70Q8NHQ1 597 aa11.97□□□□□ -0.49
CLCN4-202ENST00000380833 NEK1Q96PY6 1258 aa11.97□□□□□ -0.49
CLCN4-202ENST00000380833 ALG1Q9BT22 464 aa11.97□□□□□ -0.49
CLCN4-202ENST00000380833 ARHGEF9O43307 516 aa11.96□□□□□ -0.49
CLCN4-202ENST00000380833 MKRN3Q13064 507 aaKnown RBP11.96□□□□□ -0.49
CLCN4-202ENST00000380833 KARSQ15046 597 aaKnown RBP11.96□□□□□ -0.49
CLCN4-202ENST00000380833 GNPTABQ3T906 1256 aa11.96□□□□□ -0.49
CLCN4-202ENST00000380833 PPP4R4Q6NUP7 873 aa11.96□□□□□ -0.49
CLCN4-202ENST00000380833 NME8Q8N427 588 aa11.96□□□□□ -0.49
CLCN4-202ENST00000380833 BRF1Q92994 677 aa11.96□□□□□ -0.49
CLCN4-202ENST00000380833 DNMBPQ6XZF7 1577 aa11.96□□□□□ -0.49
CLCN4-202ENST00000380833 SKIP12755 728 aa11.96□□□□□ -0.49
CLCN4-202ENST00000380833 TNNC1P63316 161 aa11.96□□□□□ -0.49
CLCN4-202ENST00000380833 NOP53Q9NZM5 478 aaKnown RBP11.96□□□□□ -0.49
CLCN4-202ENST00000380833 BCAP29Q9UHQ4 241 aa11.96□□□□□ -0.49
CLCN4-202ENST00000380833 TLDC2A0PJX2 215 aa11.96□□□□□ -0.49
CLCN4-202ENST00000380833 RNASE9P60153 205 aaKnown RBP11.96□□□□□ -0.49
CLCN4-202ENST00000380833 CCDC102BQ68D86 513 aa11.96□□□□□ -0.49
CLCN4-202ENST00000380833 ANKRD13DQ6ZTN6 518 aa11.96□□□□□ -0.49
CLCN4-202ENST00000380833 EIF3CLB5ME19 914 aaKnown RBP11.96□□□□□ -0.5
CLCN4-202ENST00000380833 S100BP04271 92 aaPredicted RBP11.96□□□□□ -0.5
CLCN4-202ENST00000380833 GCFC2P16383 781 aaKnown RBP11.96□□□□□ -0.5
CLCN4-202ENST00000380833 TAOK1Q7L7X3 1001 aa11.96□□□□□ -0.5
CLCN4-202ENST00000380833 ST13P4Q8IZP2 240 aaPredicted RBP11.96□□□□□ -0.5
CLCN4-202ENST00000380833 FLCNQ8NFG4 579 aa11.96□□□□□ -0.5
CLCN4-202ENST00000380833 EIF3CQ99613 913 aaKnown RBP11.96□□□□□ -0.5
CLCN4-202ENST00000380833 PAGR1Q9BTK6 254 aa11.96□□□□□ -0.5
CLCN4-202ENST00000380833 CNGB3Q9NQW8 809 aa11.96□□□□□ -0.5
CLCN4-202ENST00000380833 RTN1Q16799 776 aa11.96□□□□□ -0.5
CLCN4-202ENST00000380833 MAK16Q9BXY0 300 aaKnown RBP11.96□□□□□ -0.5
CLCN4-202ENST00000380833 FAM169AQ9Y6X4 670 aa11.96□□□□□ -0.5
CLCN4-202ENST00000380833 TMED10P49755 219 aaKnown RBP11.95□□□□□ -0.5
CLCN4-202ENST00000380833 KIAA2013Q8IYS2 634 aa11.95□□□□□ -0.5
CLCN4-202ENST00000380833 MTRF1LQ9UGC7 380 aaKnown RBP11.95□□□□□ -0.5
CLCN4-202ENST00000380833 BCS1LQ9Y276 419 aa11.95□□□□□ -0.5
CLCN4-202ENST00000380833 TMOD4Q9NZQ9 345 aa11.95□□□□□ -0.5
CLCN4-202ENST00000380833 NOP56O00567 594 aaKnown RBP11.95□□□□□ -0.5
CLCN4-202ENST00000380833 KMT5BQ4FZB7 885 aa11.95□□□□□ -0.5
CLCN4-202ENST00000380833 HVCN1Q96D96 273 aa11.95□□□□□ -0.5
CLCN4-202ENST00000380833 C9orf84Q5VXU9 1444 aa11.95□□□□□ -0.5
CLCN4-202ENST00000380833 NCOA2Q15596 1464 aa11.95□□□□□ -0.5
CLCN4-202ENST00000380833 ELF1P32519 619 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms