RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 BRMS1Q9HCU9 246 aa12.56□□□□□ -0.4
DNMT3A-203ENST00000380746 SMTNL1A8MU46 457 aa12.55□□□□□ -0.4
DNMT3A-203ENST00000380746 C6orf229H3BNL8 230 aa12.55□□□□□ -0.4
DNMT3A-203ENST00000380746 PICALMQ13492 652 aa12.55□□□□□ -0.4
DNMT3A-203ENST00000380746 KRI1Q8N9T8 703 aaKnown RBP12.55□□□□□ -0.4
DNMT3A-203ENST00000380746 NBPF3Q9H094 633 aa12.55□□□□□ -0.4
DNMT3A-203ENST00000380746 RNF41Q9H4P4 317 aaPredicted RBP12.55□□□□□ -0.4
DNMT3A-203ENST00000380746 HOOK1Q9UJC3 728 aaKnown RBP12.55□□□□□ -0.4
DNMT3A-203ENST00000380746 MROH7-TTC4A0A0A0MT08 1334 aa12.55□□□□□ -0.4
DNMT3A-203ENST00000380746 RFC4P35249 363 aa12.55□□□□□ -0.4
DNMT3A-203ENST00000380746 MNS1Q8NEH6 495 aa12.55□□□□□ -0.4
DNMT3A-203ENST00000380746 DYNLL2Q96FJ2 89 aa12.55□□□□□ -0.4
DNMT3A-203ENST00000380746 EPSTI1Q96J88 318 aa12.55□□□□□ -0.4
DNMT3A-203ENST00000380746 TMEM87BQ96K49 555 aa12.55□□□□□ -0.4
DNMT3A-203ENST00000380746 NOM1Q5C9Z4 860 aaKnown RBP12.55□□□□□ -0.4
DNMT3A-203ENST00000380746 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.55□□□□□ -0.4
DNMT3A-203ENST00000380746 CCDC196A0A1B0GTZ2 297 aa12.54□□□□□ -0.4
DNMT3A-203ENST00000380746 TMEM232C9JQI7 657 aa12.54□□□□□ -0.4
DNMT3A-203ENST00000380746 UBAP1LF5GYI3 381 aa12.54□□□□□ -0.4
DNMT3A-203ENST00000380746 CCT6AP40227 531 aaKnown RBP12.54□□□□□ -0.4
DNMT3A-203ENST00000380746 IQCB1Q15051 598 aa12.54□□□□□ -0.4
DNMT3A-203ENST00000380746 NKX1-1Q15270 411 aaPredicted RBP12.54□□□□□ -0.4
DNMT3A-203ENST00000380746 SHC4Q6S5L8 630 aa12.54□□□□□ -0.4
DNMT3A-203ENST00000380746 NOSTRINQ8IVI9 506 aa12.54□□□□□ -0.4
DNMT3A-203ENST00000380746 MAPKAPK5Q8IW41 473 aa12.54□□□□□ -0.4
DNMT3A-203ENST00000380746 DHX40Q8IX18 779 aaKnown RBP12.54□□□□□ -0.4
DNMT3A-203ENST00000380746 WASF1Q92558 559 aa12.54□□□□□ -0.4
DNMT3A-203ENST00000380746 PRIMPOLQ96LW4 560 aa12.54□□□□□ -0.4
DNMT3A-203ENST00000380746 CNNM2Q9H8M5 875 aa12.54□□□□□ -0.4
DNMT3A-203ENST00000380746 SLC39A14Q15043 492 aa12.54□□□□□ -0.4
DNMT3A-203ENST00000380746 HEATR3Q7Z4Q2 680 aa12.54□□□□□ -0.4
DNMT3A-203ENST00000380746 DPF2Q92785 391 aa12.54□□□□□ -0.4
DNMT3A-203ENST00000380746 DESI2Q9BSY9 194 aa12.54□□□□□ -0.4
DNMT3A-203ENST00000380746 YEATS4O95619 227 aa12.54□□□□□ -0.4
DNMT3A-203ENST00000380746 USP17L8P0C7I0 530 aa12.54□□□□□ -0.4
DNMT3A-203ENST00000380746 TRIM28Q13263 835 aaKnown RBP12.54□□□□□ -0.4
DNMT3A-203ENST00000380746 TBC1D9BQ66K14 1250 aa12.54□□□□□ -0.4
DNMT3A-203ENST00000380746 SLC44A5Q8NCS7 719 aa12.54□□□□□ -0.4
DNMT3A-203ENST00000380746 NFE2L3Q9Y4A8 694 aa12.54□□□□□ -0.4
DNMT3A-203ENST00000380746 FAM170AA1A519 330 aa12.53□□□□□ -0.4
DNMT3A-203ENST00000380746 TRIM75PA6NK02 468 aa12.53□□□□□ -0.4
DNMT3A-203ENST00000380746 HIBADHP31937 336 aaKnown RBP12.53□□□□□ -0.4
DNMT3A-203ENST00000380746 RPS8P62241 208 aaKnown RBP12.53□□□□□ -0.4
DNMT3A-203ENST00000380746 KIF18AQ8NI77 898 aa12.53□□□□□ -0.4
DNMT3A-203ENST00000380746 IGDCC4Q8TDY8 1250 aa12.53□□□□□ -0.4
DNMT3A-203ENST00000380746 CCNL1Q9UK58 526 aaPredicted RBP12.53□□□□□ -0.4
DNMT3A-203ENST00000380746 COL5A2P05997 1499 aaPredicted RBP12.53□□□□□ -0.4
DNMT3A-203ENST00000380746 PRR29P0C7W0 189 aa12.53□□□□□ -0.4
DNMT3A-203ENST00000380746 CNPY4Q8N129 248 aa12.53□□□□□ -0.4
DNMT3A-203ENST00000380746 RNF216Q9NWF9 866 aaPredicted RBP12.53□□□□□ -0.4
DNMT3A-203ENST00000380746 EIF5P55010 431 aaKnown RBP12.53□□□□□ -0.4
DNMT3A-203ENST00000380746 NLRP12P59046 1061 aa12.53□□□□□ -0.4
DNMT3A-203ENST00000380746 INTS5Q6P9B9 1019 aaKnown RBP12.53□□□□□ -0.4
DNMT3A-203ENST00000380746 IL17RAQ96F46 866 aa12.53□□□□□ -0.4
DNMT3A-203ENST00000380746 CCDC34Q96HJ3 373 aa12.53□□□□□ -0.4
DNMT3A-203ENST00000380746 CSRNP2Q9H175 543 aa12.53□□□□□ -0.4
DNMT3A-203ENST00000380746 ZNF215Q9UL58 517 aaPredicted RBP12.53□□□□□ -0.4
DNMT3A-203ENST00000380746 CPDO75976 1380 aa12.52□□□□□ -0.4
DNMT3A-203ENST00000380746 CMA1P23946 247 aa12.52□□□□□ -0.4
DNMT3A-203ENST00000380746 AMOTL1Q8IY63 956 aa12.52□□□□□ -0.4
DNMT3A-203ENST00000380746 TGFBRAP1Q8WUH2 860 aa12.52□□□□□ -0.4
DNMT3A-203ENST00000380746 ALDH8A1Q9H2A2 487 aaPredicted RBP12.52□□□□□ -0.4
DNMT3A-203ENST00000380746 LZTFL1Q9NQ48 299 aa12.52□□□□□ -0.4
DNMT3A-203ENST00000380746 POLR3EQ9NVU0 708 aa12.52□□□□□ -0.4
DNMT3A-203ENST00000380746 CHD2O14647 1828 aaKnown RBP12.52□□□□□ -0.41
DNMT3A-203ENST00000380746 SSBP05455 408 aaKnown RBP eCLIP12.52□□□□□ -0.41
DNMT3A-203ENST00000380746 MYL5Q02045 173 aa12.52□□□□□ -0.41
DNMT3A-203ENST00000380746 PLA2G4DQ86XP0 818 aa12.52□□□□□ -0.41
DNMT3A-203ENST00000380746 ZNF444Q8N0Y2 327 aaPredicted RBP12.52□□□□□ -0.41
DNMT3A-203ENST00000380746 ENGASEQ8NFI3 743 aa12.52□□□□□ -0.41
DNMT3A-203ENST00000380746 KAT14Q9H8E8 782 aa12.52□□□□□ -0.41
DNMT3A-203ENST00000380746 CACNA1FO60840 1977 aa12.52□□□□□ -0.41
DNMT3A-203ENST00000380746 TFAP4Q01664 338 aa12.51□□□□□ -0.41
DNMT3A-203ENST00000380746 ELF2Q15723 593 aa12.51□□□□□ -0.41
DNMT3A-203ENST00000380746 TXNRD3Q86VQ6 643 aa12.51□□□□□ -0.41
DNMT3A-203ENST00000380746 ZNF34Q8IZ26 560 aa12.51□□□□□ -0.41
DNMT3A-203ENST00000380746 GNG11P61952 73 aa12.51□□□□□ -0.41
DNMT3A-203ENST00000380746 PARP10Q53GL7 1025 aa12.51□□□□□ -0.41
DNMT3A-203ENST00000380746 ZNF771Q7L3S4 317 aaPredicted RBP12.51□□□□□ -0.41
DNMT3A-203ENST00000380746 CRNKL1Q9BZJ0 848 aaKnown RBP12.51□□□□□ -0.41
DNMT3A-203ENST00000380746 SAMSN1Q9NSI8 373 aaKnown RBP12.51□□□□□ -0.41
DNMT3A-203ENST00000380746 MPHOSPH10O00566 681 aaKnown RBP12.51□□□□□ -0.41
DNMT3A-203ENST00000380746 DEXIO95424 95 aa12.51□□□□□ -0.41
DNMT3A-203ENST00000380746 TPTE2Q6XPS3 522 aa12.51□□□□□ -0.41
DNMT3A-203ENST00000380746 MINPP1Q9UNW1 487 aa12.51□□□□□ -0.41
DNMT3A-203ENST00000380746 RTCBQ9Y3I0 505 aaKnown RBP12.51□□□□□ -0.41
DNMT3A-203ENST00000380746 USP17L3A6NCW0 530 aa12.5□□□□□ -0.41
DNMT3A-203ENST00000380746 USP17L4A6NCW7 530 aa12.5□□□□□ -0.41
DNMT3A-203ENST00000380746 CAMTA2O94983 1202 aa12.5□□□□□ -0.41
DNMT3A-203ENST00000380746 TSPY3P0CV98 308 aa12.5□□□□□ -0.41
DNMT3A-203ENST00000380746 TSPY8P0CW00 308 aa12.5□□□□□ -0.41
DNMT3A-203ENST00000380746 MAPK8IP2Q13387 824 aaPredicted RBP12.5□□□□□ -0.41
DNMT3A-203ENST00000380746 POSTNQ15063 836 aa12.5□□□□□ -0.41
DNMT3A-203ENST00000380746 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.5□□□□□ -0.41
DNMT3A-203ENST00000380746 USP17L1Q7RTZ2 530 aa12.5□□□□□ -0.41
DNMT3A-203ENST00000380746 VPS16Q9H269 839 aa12.5□□□□□ -0.41
DNMT3A-203ENST00000380746 TACC3Q9Y6A5 838 aa12.5□□□□□ -0.41
DNMT3A-203ENST00000380746 RBM5P52756 815 aaKnown RBP eCLIP12.5□□□□□ -0.41
DNMT3A-203ENST00000380746 MECOMQ03112 1051 aa12.5□□□□□ -0.41
DNMT3A-203ENST00000380746 RRAGBQ5VZM2 374 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms