RNA–Protein interactions for RNA: ENST00000380151.3

CDKN2A-203, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best)

Gene CDKN2A, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-203ENST00000380151 PRRT2Q7Z6L0 340 aaPredicted RBP29.02■■■□□ 2.24
CDKN2A-203ENST00000380151 MAGEB6Q8N7X4 407 aa29.02■■■□□ 2.24
CDKN2A-203ENST00000380151 MIGA1Q8NAN2 632 aa29.02■■■□□ 2.24
CDKN2A-203ENST00000380151 CPA4Q9UI42 421 aa29.02■■■□□ 2.24
CDKN2A-203ENST00000380151 SIPA1L1O43166 1804 aa29.01■■■□□ 2.24
CDKN2A-203ENST00000380151 TRIM75PA6NK02 468 aa29.01■■■□□ 2.23
CDKN2A-203ENST00000380151 IFIT2P09913 472 aaKnown RBP29.01■■■□□ 2.23
CDKN2A-203ENST00000380151 GPAT2Q6NUI2 795 aa29.01■■■□□ 2.23
CDKN2A-203ENST00000380151 ARHGAP39Q9C0H5 1083 aa29.01■■■□□ 2.23
CDKN2A-203ENST00000380151 FOCADQ5VW36 1801 aa29.01■■■□□ 2.23
CDKN2A-203ENST00000380151 PHIPQ8WWQ0 1821 aa29.01■■■□□ 2.23
CDKN2A-203ENST00000380151 ADGRA2Q96PE1 1338 aa29■■■□□ 2.23
CDKN2A-203ENST00000380151 RAB11FIP3O75154 756 aa29■■■□□ 2.23
CDKN2A-203ENST00000380151 LACTBP83111 547 aaPredicted RBP29■■■□□ 2.23
CDKN2A-203ENST00000380151 GADL1Q6ZQY3 521 aa29■■■□□ 2.23
CDKN2A-203ENST00000380151 PARK7Q99497 189 aaKnown RBP29■■■□□ 2.23
CDKN2A-203ENST00000380151 DHX36Q9H2U1 1008 aaKnown RBP29■■■□□ 2.23
CDKN2A-203ENST00000380151 HERC5Q9UII4 1024 aaKnown RBP29■■■□□ 2.23
CDKN2A-203ENST00000380151 ECM2O94769 699 aaPredicted RBP28.99■■■□□ 2.23
CDKN2A-203ENST00000380151 MAP3K12Q12852 859 aa28.99■■■□□ 2.23
CDKN2A-203ENST00000380151 RRP1BQ14684 758 aaKnown RBP28.99■■■□□ 2.23
CDKN2A-203ENST00000380151 ARHGEF6Q15052 776 aa28.99■■■□□ 2.23
CDKN2A-203ENST00000380151 C17orf99Q6UX52 265 aa28.99■■■□□ 2.23
CDKN2A-203ENST00000380151 FASTKD5Q7L8L6 764 aaKnown RBP28.99■■■□□ 2.23
CDKN2A-203ENST00000380151 PI4KBQ9UBF8 816 aa28.99■■■□□ 2.23
CDKN2A-203ENST00000380151 SAP30BPQ9UHR5 308 aaKnown RBP28.99■■■□□ 2.23
CDKN2A-203ENST00000380151 PTPRFP10586 1907 aa28.98■■■□□ 2.23
CDKN2A-203ENST00000380151 PALD1Q9ULE6 856 aa28.98■■■□□ 2.23
CDKN2A-203ENST00000380151 CYP2C8P10632 490 aa28.97■■■□□ 2.23
CDKN2A-203ENST00000380151 CAP2P40123 477 aa28.97■■■□□ 2.23
CDKN2A-203ENST00000380151 KIF22Q14807 665 aa28.97■■■□□ 2.23
CDKN2A-203ENST00000380151 DNAJC2Q99543 621 aaKnown RBP28.97■■■□□ 2.23
CDKN2A-203ENST00000380151 DNAJC18Q9H819 358 aa28.97■■■□□ 2.23
CDKN2A-203ENST00000380151 PTCH2Q9Y6C5 1203 aa28.97■■■□□ 2.23
CDKN2A-203ENST00000380151 ATAD5Q96QE3 1844 aa28.97■■■□□ 2.23
CDKN2A-203ENST00000380151 SLC4A8Q2Y0W8 1093 aa28.96■■■□□ 2.23
CDKN2A-203ENST00000380151 CENPFP49454 3210 aa28.94■■■□□ 2.22
CDKN2A-203ENST00000380151 GOLIM4O00461 696 aa28.94■■■□□ 2.22
CDKN2A-203ENST00000380151 TTF1Q15361 905 aaPredicted RBP28.94■■■□□ 2.22
CDKN2A-203ENST00000380151 CERS3Q8IU89 383 aa28.94■■■□□ 2.22
CDKN2A-203ENST00000380151 CRACR2BQ8N4Y2 399 aaPredicted RBP28.94■■■□□ 2.22
CDKN2A-203ENST00000380151 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.94■■■□□ 2.22
CDKN2A-203ENST00000380151 ARMC5Q96C12 935 aa28.94■■■□□ 2.22
CDKN2A-203ENST00000380151 TRIM34Q9BYJ4 488 aa28.94■■■□□ 2.22
CDKN2A-203ENST00000380151 HLA-DOAP06340 250 aa28.93■■■□□ 2.22
CDKN2A-203ENST00000380151 CTGFP29279 349 aa28.93■■■□□ 2.22
CDKN2A-203ENST00000380151 USP5P45974 858 aa28.93■■■□□ 2.22
CDKN2A-203ENST00000380151 SPP2Q13103 211 aa28.93■■■□□ 2.22
CDKN2A-203ENST00000380151 PDE6AP16499 860 aa28.92■■■□□ 2.22
CDKN2A-203ENST00000380151 TMED8Q6PL24 325 aaPredicted RBP28.92■■■□□ 2.22
CDKN2A-203ENST00000380151 ZNF280CQ8ND82 737 aa28.92■■■□□ 2.22
CDKN2A-203ENST00000380151 EDC3Q96F86 508 aaKnown RBP28.92■■■□□ 2.22
CDKN2A-203ENST00000380151 SLC45A1Q9Y2W3 748 aa28.92■■■□□ 2.22
CDKN2A-203ENST00000380151 USP17L5A8MUK1 530 aa28.91■■■□□ 2.22
CDKN2A-203ENST00000380151 BCRP11274 1271 aa28.91■■■□□ 2.22
CDKN2A-203ENST00000380151 PSMC4P43686 418 aa28.91■■■□□ 2.22
CDKN2A-203ENST00000380151 TREML2Q5T2D2 321 aa28.91■■■□□ 2.22
CDKN2A-203ENST00000380151 SLC9C2Q5TAH2 1124 aa28.91■■■□□ 2.22
CDKN2A-203ENST00000380151 METTL16Q86W50 562 aaKnown RBP28.91■■■□□ 2.22
CDKN2A-203ENST00000380151 FOXP4Q8IVH2 680 aaPredicted RBP28.91■■■□□ 2.22
CDKN2A-203ENST00000380151 TRIM47Q96LD4 638 aa28.91■■■□□ 2.22
CDKN2A-203ENST00000380151 AGTPBP1Q9UPW5 1226 aa28.91■■■□□ 2.22
CDKN2A-203ENST00000380151 GDF11O95390 407 aa28.9■■■□□ 2.22
CDKN2A-203ENST00000380151 JAG1P78504 1218 aa28.9■■■□□ 2.22
CDKN2A-203ENST00000380151 SHROOM1Q2M3G4 852 aaPredicted RBP28.9■■■□□ 2.22
CDKN2A-203ENST00000380151 SLC9C1Q4G0N8 1177 aa28.9■■■□□ 2.22
CDKN2A-203ENST00000380151 RIOK1Q9BRS2 568 aaKnown RBP28.9■■■□□ 2.22
CDKN2A-203ENST00000380151 TBC1D2Q9BYX2 928 aa28.9■■■□□ 2.22
CDKN2A-203ENST00000380151 LRRCC1Q9C099 1032 aa28.9■■■□□ 2.22
CDKN2A-203ENST00000380151 BOLA2Q9H3K6 86 aa28.9■■■□□ 2.22
CDKN2A-203ENST00000380151 LOC285556D6RIA3 1793 aa28.89■■■□□ 2.22
CDKN2A-203ENST00000380151 SMARCA5O60264 1052 aaPredicted RBP28.89■■■□□ 2.22
CDKN2A-203ENST00000380151 HMGCS2P54868 508 aa28.89■■■□□ 2.22
CDKN2A-203ENST00000380151 TNRC18O15417 2968 aaPredicted RBP28.89■■■□□ 2.21
CDKN2A-203ENST00000380151 MYH1P12882 1939 aa28.88■■■□□ 2.21
CDKN2A-203ENST00000380151 MAGEB6P1A0A0J9YX57 407 aa28.88■■■□□ 2.21
CDKN2A-203ENST00000380151 POTEFA5A3E0 1075 aa28.88■■■□□ 2.21
CDKN2A-203ENST00000380151 GNRH1P01148 92 aa28.88■■■□□ 2.21
CDKN2A-203ENST00000380151 ASNSP08243 561 aa28.88■■■□□ 2.21
CDKN2A-203ENST00000380151 PROCA1Q8NCQ7 364 aaPredicted RBP28.88■■■□□ 2.21
CDKN2A-203ENST00000380151 SMCR8Q8TEV9 937 aaPredicted RBP28.88■■■□□ 2.21
CDKN2A-203ENST00000380151 AS3MTQ9HBK9 375 aa28.88■■■□□ 2.21
CDKN2A-203ENST00000380151 ZNF532Q9HCE3 1301 aa28.88■■■□□ 2.21
CDKN2A-203ENST00000380151 FMNL1O95466 1100 aaPredicted RBP28.87■■■□□ 2.21
CDKN2A-203ENST00000380151 ATP5JP18859 108 aa28.87■■■□□ 2.21
CDKN2A-203ENST00000380151 ZNF333Q96JL9 665 aa28.87■■■□□ 2.21
CDKN2A-203ENST00000380151 PAG1Q9NWQ8 432 aa28.87■■■□□ 2.21
CDKN2A-203ENST00000380151 DDX60LQ5H9U9 1706 aaKnown RBP28.86■■■□□ 2.21
CDKN2A-203ENST00000380151 OSBPP22059 807 aa28.86■■■□□ 2.21
CDKN2A-203ENST00000380151 SRRDQ9UH36 339 aa28.86■■■□□ 2.21
CDKN2A-203ENST00000380151 ZBTB21Q9ULJ3 1066 aa28.86■■■□□ 2.21
CDKN2A-203ENST00000380151 TCRBV5S4A2TA0A5A2 114 aa28.85■■■□□ 2.21
CDKN2A-203ENST00000380151 PRMT2P55345 433 aa28.85■■■□□ 2.21
CDKN2A-203ENST00000380151 MTMR2Q13614 643 aa28.85■■■□□ 2.21
CDKN2A-203ENST00000380151 SH3TC2Q8TF17 1288 aa28.85■■■□□ 2.21
CDKN2A-203ENST00000380151 HAUS7Q99871 368 aa28.85■■■□□ 2.21
CDKN2A-203ENST00000380151 PNMA3Q9UL41 463 aa28.85■■■□□ 2.21
CDKN2A-203ENST00000380151 NAV1Q8NEY1 1877 aa28.85■■■□□ 2.21
CDKN2A-203ENST00000380151 NBPF11Q86T75 865 aa28.84■■■□□ 2.21
CDKN2A-203ENST00000380151 WDR18Q9BV38 432 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms