RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 TERF2Q15554 542 aa12.92□□□□□ -0.34
SMAD9-202ENST00000379826 CNNM2Q9H8M5 875 aa12.92□□□□□ -0.34
SMAD9-202ENST00000379826 ZMYM6O95789 1325 aa12.92□□□□□ -0.34
SMAD9-202ENST00000379826 IRS4O14654 1257 aaPredicted RBP12.92□□□□□ -0.34
SMAD9-202ENST00000379826 UQCRFS1P1P0C7P4 283 aa12.92□□□□□ -0.34
SMAD9-202ENST00000379826 ATP6V1AP38606 617 aa12.92□□□□□ -0.34
SMAD9-202ENST00000379826 SPECC1LQ69YQ0 1117 aa12.92□□□□□ -0.34
SMAD9-202ENST00000379826 IQCA1Q86XH1 822 aa12.92□□□□□ -0.34
SMAD9-202ENST00000379826 TSPYL1Q9H0U9 437 aa12.92□□□□□ -0.34
SMAD9-202ENST00000379826 GYS2P54840 703 aa12.91□□□□□ -0.34
SMAD9-202ENST00000379826 FMR1NBQ8N0W7 255 aaPredicted RBP12.91□□□□□ -0.34
SMAD9-202ENST00000379826 POLR3EQ9NVU0 708 aa12.91□□□□□ -0.34
SMAD9-202ENST00000379826 KIF28PB7ZC32 967 aa12.91□□□□□ -0.34
SMAD9-202ENST00000379826 TRIM47Q96LD4 638 aa12.91□□□□□ -0.34
SMAD9-202ENST00000379826 AFF2P51816 1311 aa12.91□□□□□ -0.34
SMAD9-202ENST00000379826 HDXQ7Z353 690 aa12.91□□□□□ -0.34
SMAD9-202ENST00000379826 ZHX3Q9H4I2 956 aa12.91□□□□□ -0.34
SMAD9-202ENST00000379826 MAP9Q49MG5 647 aa12.91□□□□□ -0.34
SMAD9-202ENST00000379826 IQCEQ6IPM2 695 aa12.91□□□□□ -0.34
SMAD9-202ENST00000379826 ATF5Q9Y2D1 282 aaPredicted RBP12.91□□□□□ -0.34
SMAD9-202ENST00000379826 RTCBQ9Y3I0 505 aaKnown RBP12.91□□□□□ -0.34
SMAD9-202ENST00000379826 DLG5Q8TDM6 1919 aa12.91□□□□□ -0.34
SMAD9-202ENST00000379826 STAT6P42226 847 aa12.91□□□□□ -0.34
SMAD9-202ENST00000379826 MTIF2P46199 727 aaKnown RBP12.91□□□□□ -0.34
SMAD9-202ENST00000379826 EFCAB8A8MWE9 144 aa12.9□□□□□ -0.34
SMAD9-202ENST00000379826 ZBTB22O15209 634 aa12.9□□□□□ -0.34
SMAD9-202ENST00000379826 SSBP05455 408 aaKnown RBP eCLIP12.9□□□□□ -0.34
SMAD9-202ENST00000379826 TOGARAM2Q6ZUX3 1019 aa12.9□□□□□ -0.34
SMAD9-202ENST00000379826 PLCD3Q8N3E9 789 aa12.9□□□□□ -0.34
SMAD9-202ENST00000379826 GDAP1L1Q96MZ0 367 aa12.9□□□□□ -0.34
SMAD9-202ENST00000379826 CCNL1Q9UK58 526 aaPredicted RBP12.9□□□□□ -0.34
SMAD9-202ENST00000379826 AXIN2Q9Y2T1 843 aa12.9□□□□□ -0.34
SMAD9-202ENST00000379826 BTBD18B2RXH4 712 aa12.9□□□□□ -0.34
SMAD9-202ENST00000379826 PRDM1O75626 825 aa12.9□□□□□ -0.34
SMAD9-202ENST00000379826 SMARCC2Q8TAQ2 1214 aa12.9□□□□□ -0.34
SMAD9-202ENST00000379826 PCDHA5Q9Y5H7 936 aa12.9□□□□□ -0.34
SMAD9-202ENST00000379826 GJA3Q9Y6H8 435 aa12.9□□□□□ -0.34
SMAD9-202ENST00000379826 IBSPP21815 317 aaPredicted RBP12.9□□□□□ -0.34
SMAD9-202ENST00000379826 SLC39A14Q15043 492 aa12.9□□□□□ -0.34
SMAD9-202ENST00000379826 FAM196AQ6ZSG2 479 aa12.9□□□□□ -0.34
SMAD9-202ENST00000379826 RABEP2Q9H5N1 569 aa12.9□□□□□ -0.34
SMAD9-202ENST00000379826 INCENPQ9NQS7 918 aa12.9□□□□□ -0.34
SMAD9-202ENST00000379826 CCDC87Q9NVE4 849 aa12.9□□□□□ -0.34
SMAD9-202ENST00000379826 TAB2Q9NYJ8 693 aa12.9□□□□□ -0.34
SMAD9-202ENST00000379826 ANKIB1Q9P2G1 1089 aa12.9□□□□□ -0.34
SMAD9-202ENST00000379826 TRIM37O94972 964 aa12.89□□□□□ -0.35
SMAD9-202ENST00000379826 TRIM21P19474 475 aaKnown RBP12.89□□□□□ -0.35
SMAD9-202ENST00000379826 MED23Q9ULK4 1368 aa12.89□□□□□ -0.35
SMAD9-202ENST00000379826 WDR78Q5VTH9 848 aa12.89□□□□□ -0.35
SMAD9-202ENST00000379826 SMYD4Q8IYR2 804 aaPredicted RBP12.89□□□□□ -0.35
SMAD9-202ENST00000379826 TMEM87BQ96K49 555 aa12.89□□□□□ -0.35
SMAD9-202ENST00000379826 VPS54Q9P1Q0 977 aa12.89□□□□□ -0.35
SMAD9-202ENST00000379826 SOWAHDA6NJG2 315 aa12.89□□□□□ -0.35
SMAD9-202ENST00000379826 CTDNEP1O95476 244 aa12.89□□□□□ -0.35
SMAD9-202ENST00000379826 ARHGEF25Q86VW2 580 aa12.89□□□□□ -0.35
SMAD9-202ENST00000379826 GPR161Q8N6U8 529 aaKnown RBP12.89□□□□□ -0.35
SMAD9-202ENST00000379826 ALDH8A1Q9H2A2 487 aaPredicted RBP12.89□□□□□ -0.35
SMAD9-202ENST00000379826 MORC2Q9Y6X9 1032 aaPredicted RBP12.89□□□□□ -0.35
SMAD9-202ENST00000379826 CCDC194A0A1B0GVG4 234 aa12.89□□□□□ -0.35
SMAD9-202ENST00000379826 MACROD2A1Z1Q3 448 aa12.88□□□□□ -0.35
SMAD9-202ENST00000379826 C6orf229H3BNL8 230 aa12.88□□□□□ -0.35
SMAD9-202ENST00000379826 CCDC96Q2M329 555 aa12.88□□□□□ -0.35
SMAD9-202ENST00000379826 FKBP15Q5T1M5 1219 aa12.88□□□□□ -0.35
SMAD9-202ENST00000379826 SLF1Q9BQI6 1058 aa12.88□□□□□ -0.35
SMAD9-202ENST00000379826 PNMA6AP0CW24 399 aaPredicted RBP12.88□□□□□ -0.35
SMAD9-202ENST00000379826 RILPL1Q5EBL4 403 aa12.88□□□□□ -0.35
SMAD9-202ENST00000379826 NOSTRINQ8IVI9 506 aa12.88□□□□□ -0.35
SMAD9-202ENST00000379826 MLKLQ8NB16 471 aa12.88□□□□□ -0.35
SMAD9-202ENST00000379826 ESR2Q92731 530 aa12.88□□□□□ -0.35
SMAD9-202ENST00000379826 DPF2Q92785 391 aa12.88□□□□□ -0.35
SMAD9-202ENST00000379826 NAPGQ99747 312 aaPredicted RBP12.88□□□□□ -0.35
SMAD9-202ENST00000379826 PHLPP2Q6ZVD8 1323 aa12.88□□□□□ -0.35
SMAD9-202ENST00000379826 DNAJC21Q5F1R6 531 aaKnown RBP12.88□□□□□ -0.35
SMAD9-202ENST00000379826 HINFPQ9BQA5 517 aa12.88□□□□□ -0.35
SMAD9-202ENST00000379826 SAMSN1Q9NSI8 373 aaKnown RBP12.88□□□□□ -0.35
SMAD9-202ENST00000379826 MAN1B1Q9UKM7 699 aa12.88□□□□□ -0.35
SMAD9-202ENST00000379826 V9GY48 417 aaPredicted RBP12.88□□□□□ -0.35
SMAD9-202ENST00000379826 DEXIO95424 95 aa12.88□□□□□ -0.35
SMAD9-202ENST00000379826 CAVIN4Q5BKX8 364 aa12.88□□□□□ -0.35
SMAD9-202ENST00000379826 E4F1Q66K89 784 aaPredicted RBP12.88□□□□□ -0.35
SMAD9-202ENST00000379826 PIK3AP1Q6ZUJ8 805 aa12.88□□□□□ -0.35
SMAD9-202ENST00000379826 VSTM4Q8IW00 320 aa12.88□□□□□ -0.35
SMAD9-202ENST00000379826 JAG2Q9Y219 1238 aa12.88□□□□□ -0.35
SMAD9-202ENST00000379826 MAGEB6P1A0A0J9YX57 407 aa12.87□□□□□ -0.35
SMAD9-202ENST00000379826 KIAA0754O94854 1291 aa12.87□□□□□ -0.35
SMAD9-202ENST00000379826 CCDC178Q5BJE1 867 aa12.87□□□□□ -0.35
SMAD9-202ENST00000379826 SOGA3Q5TF21 947 aa12.87□□□□□ -0.35
SMAD9-202ENST00000379826 KRT18P05783 430 aaKnown RBP12.87□□□□□ -0.35
SMAD9-202ENST00000379826 USP5P45974 858 aa12.87□□□□□ -0.35
SMAD9-202ENST00000379826 RBL2Q08999 1139 aa12.87□□□□□ -0.35
SMAD9-202ENST00000379826 CNGA4Q8IV77 575 aa12.87□□□□□ -0.35
SMAD9-202ENST00000379826 TSPY2A6NKD2 308 aa12.87□□□□□ -0.35
SMAD9-202ENST00000379826 VAT1LQ9HCJ6 419 aa12.87□□□□□ -0.35
SMAD9-202ENST00000379826 TMEM94Q12767 1356 aa12.87□□□□□ -0.35
SMAD9-202ENST00000379826 PCDH11XQ9BZA7 1347 aa12.87□□□□□ -0.35
SMAD9-202ENST00000379826 PCDH11YQ9BZA8 1340 aa12.87□□□□□ -0.35
SMAD9-202ENST00000379826 NPHP4O75161 1426 aaPredicted RBP12.87□□□□□ -0.35
SMAD9-202ENST00000379826 SHTN1A0MZ66 631 aa12.87□□□□□ -0.35
SMAD9-202ENST00000379826 FOXN1O15353 648 aa12.87□□□□□ -0.35
SMAD9-202ENST00000379826 MYO1BO43795 1136 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms