RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 ANGEL1Q9UNK9 670 aaKnown RBP14.28□□□□□ -0.12
PCNA-201ENST00000379143 MYH1P12882 1939 aa14.28□□□□□ -0.12
PCNA-201ENST00000379143 DDX60LQ5H9U9 1706 aaKnown RBP14.27□□□□□ -0.12
PCNA-201ENST00000379143 LBX1P52954 281 aa14.27□□□□□ -0.12
PCNA-201ENST00000379143 HUNKP57058 714 aa14.27□□□□□ -0.12
PCNA-201ENST00000379143 MAP3K10Q02779 954 aa14.27□□□□□ -0.12
PCNA-201ENST00000379143 PRKG1Q13976 671 aa14.27□□□□□ -0.12
PCNA-201ENST00000379143 CWC27Q6UX04 472 aaKnown RBP14.27□□□□□ -0.12
PCNA-201ENST00000379143 FOXP4Q8IVH2 680 aaPredicted RBP14.27□□□□□ -0.12
PCNA-201ENST00000379143 TRIM34Q9BYJ4 488 aa14.27□□□□□ -0.12
PCNA-201ENST00000379143 ARPP21Q9UBL0 812 aaPredicted RBP14.27□□□□□ -0.12
PCNA-201ENST00000379143 PALD1Q9ULE6 856 aa14.27□□□□□ -0.12
PCNA-201ENST00000379143 THSD7BQ9C0I4 1608 aa14.27□□□□□ -0.13
PCNA-201ENST00000379143 RAD50Q92878 1312 aa14.27□□□□□ -0.13
PCNA-201ENST00000379143 GSG1L2A8MUP6 293 aa14.26□□□□□ -0.13
PCNA-201ENST00000379143 PRKAB2O43741 272 aa14.26□□□□□ -0.13
PCNA-201ENST00000379143 USP2O75604 605 aaPredicted RBP14.26□□□□□ -0.13
PCNA-201ENST00000379143 APPP05067 770 aa14.26□□□□□ -0.13
PCNA-201ENST00000379143 POLR3DP05423 398 aaPredicted RBP14.26□□□□□ -0.13
PCNA-201ENST00000379143 CHMLP26374 656 aa14.26□□□□□ -0.13
PCNA-201ENST00000379143 ANKRD13AQ8IZ07 590 aa14.26□□□□□ -0.13
PCNA-201ENST00000379143 CRACR2BQ8N4Y2 399 aaPredicted RBP14.26□□□□□ -0.13
PCNA-201ENST00000379143 EHD4Q9H223 541 aa14.26□□□□□ -0.13
PCNA-201ENST00000379143 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.26□□□□□ -0.132e-12■■■■■ 34
PCNA-201ENST00000379143 SAP30BPQ9UHR5 308 aaKnown RBP14.26□□□□□ -0.13
PCNA-201ENST00000379143 CCDC171Q6TFL3 1326 aa14.26□□□□□ -0.13
PCNA-201ENST00000379143 RASSF10A6NK89 507 aa14.25□□□□□ -0.13
PCNA-201ENST00000379143 UBE2Q2LH0YL09 131 aa14.25□□□□□ -0.13
PCNA-201ENST00000379143 TDO2P48775 406 aa14.25□□□□□ -0.13
PCNA-201ENST00000379143 DEFB115Q30KQ5 88 aa14.25□□□□□ -0.13
PCNA-201ENST00000379143 LDLRAD1Q5T700 205 aa14.25□□□□□ -0.13
PCNA-201ENST00000379143 CASC1Q6TDU7 716 aa14.25□□□□□ -0.13
PCNA-201ENST00000379143 MIGA2Q7L4E1 593 aa14.25□□□□□ -0.13
PCNA-201ENST00000379143 METTL16Q86W50 562 aaKnown RBP14.25□□□□□ -0.13
PCNA-201ENST00000379143 SERPINB13Q9UIV8 391 aa14.25□□□□□ -0.13
PCNA-201ENST00000379143 CSADQ9Y600 493 aa14.25□□□□□ -0.13
PCNA-201ENST00000379143 HSPA8P11142 646 aaKnown RBP14.24□□□□□ -0.13
PCNA-201ENST00000379143 MAP3K9P80192 1104 aa14.24□□□□□ -0.13
PCNA-201ENST00000379143 SBK1Q52WX2 424 aa14.24□□□□□ -0.13
PCNA-201ENST00000379143 RGMBQ6NW40 437 aa14.24□□□□□ -0.13
PCNA-201ENST00000379143 CCDC129Q6ZRS4 1044 aa14.24□□□□□ -0.13
PCNA-201ENST00000379143 MOB2Q70IA6 237 aa14.24□□□□□ -0.13
PCNA-201ENST00000379143 IFNL3Q8IZI9 196 aa14.24□□□□□ -0.13
PCNA-201ENST00000379143 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.24□□□□□ -0.134e-7■■■■□ 24.6
PCNA-201ENST00000379143 WRNIP1Q96S55 665 aa14.24□□□□□ -0.13
PCNA-201ENST00000379143 NAPBQ9H115 298 aa14.24□□□□□ -0.13
PCNA-201ENST00000379143 ZNF112Q9UJU3 913 aa14.24□□□□□ -0.13
PCNA-201ENST00000379143 USP17L12C9JPN9 530 aa14.23□□□□□ -0.13
PCNA-201ENST00000379143 USP17L21D6R901 530 aa14.23□□□□□ -0.13
PCNA-201ENST00000379143 ZMYM6O95789 1325 aa14.23□□□□□ -0.13
PCNA-201ENST00000379143 HSPD1P10809 573 aaKnown RBP14.23□□□□□ -0.13
PCNA-201ENST00000379143 ECE1P42892 770 aa14.23□□□□□ -0.13
PCNA-201ENST00000379143 PLCD1P51178 756 aa14.23□□□□□ -0.13
PCNA-201ENST00000379143 C12orf60Q5U649 245 aa14.23□□□□□ -0.13
PCNA-201ENST00000379143 CTR9Q6PD62 1173 aa14.23□□□□□ -0.13
PCNA-201ENST00000379143 ZNF589Q86UQ0 364 aaPredicted RBP14.23□□□□□ -0.13
PCNA-201ENST00000379143 CCDC102AQ96A19 550 aa14.23□□□□□ -0.13
PCNA-201ENST00000379143 ABHD8Q96I13 439 aa14.23□□□□□ -0.13
PCNA-201ENST00000379143 FZD1Q9UP38 647 aa14.23□□□□□ -0.13
PCNA-201ENST00000379143 GTF3C3Q9Y5Q9 886 aa14.23□□□□□ -0.13
PCNA-201ENST00000379143 BAZ2AQ9UIF9 1905 aaKnown RBP14.23□□□□□ -0.13
PCNA-201ENST00000379143 SIPA1L1O43166 1804 aa14.23□□□□□ -0.13
PCNA-201ENST00000379143 PHF20L1A8MW92 1017 aa14.22□□□□□ -0.13
PCNA-201ENST00000379143 CTNND1O60716 968 aaKnown RBP14.22□□□□□ -0.13
PCNA-201ENST00000379143 CDC45O75419 566 aa14.22□□□□□ -0.13
PCNA-201ENST00000379143 ZNF157P51786 506 aaPredicted RBP14.22□□□□□ -0.13
PCNA-201ENST00000379143 ALX1Q15699 326 aa14.22□□□□□ -0.13
PCNA-201ENST00000379143 SLC10A4Q96EP9 437 aa14.22□□□□□ -0.13
PCNA-201ENST00000379143 EPB41L4AQ9HCS5 686 aaPredicted RBP14.22□□□□□ -0.13
PCNA-201ENST00000379143 SWAP70Q9UH65 585 aa14.22□□□□□ -0.13
PCNA-201ENST00000379143 OTOFQ9HC10 1997 aa14.21□□□□□ -0.13
PCNA-201ENST00000379143 SGSM2O43147 1006 aa14.21□□□□□ -0.13
PCNA-201ENST00000379143 SLC3A2P08195 630 aaKnown RBP14.21□□□□□ -0.13
PCNA-201ENST00000379143 GABPAQ06546 454 aa14.21□□□□□ -0.13
PCNA-201ENST00000379143 SLC4A8Q2Y0W8 1093 aa14.21□□□□□ -0.13
PCNA-201ENST00000379143 NOL9Q5SY16 702 aaKnown RBP14.21□□□□□ -0.13
PCNA-201ENST00000379143 VPS53Q5VIR6 699 aa14.21□□□□□ -0.13
PCNA-201ENST00000379143 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.21□□□□□ -0.13
PCNA-201ENST00000379143 PAXIP1Q6ZW49 1069 aaPredicted RBP14.21□□□□□ -0.13
PCNA-201ENST00000379143 DSCC1Q9BVC3 393 aa14.21□□□□□ -0.13
PCNA-201ENST00000379143 ZNF287Q9HBT7 754 aa14.21□□□□□ -0.13
PCNA-201ENST00000379143 GINM1Q9NU53 330 aa14.21□□□□□ -0.13
PCNA-201ENST00000379143 LAMB1P07942 1786 aa14.21□□□□□ -0.13
PCNA-201ENST00000379143 ROBO3Q96MS0 1386 aa14.21□□□□□ -0.14
PCNA-201ENST00000379143 WDR33Q9C0J8 1336 aaKnown RBP14.2□□□□□ -0.14
PCNA-201ENST00000379143 FAM196BA6NMK8 535 aa14.2□□□□□ -0.14
PCNA-201ENST00000379143 MINDY4BA8MYZ0 360 aa14.2□□□□□ -0.14
PCNA-201ENST00000379143 FOXP2O15409 715 aa14.2□□□□□ -0.14
PCNA-201ENST00000379143 TNRC18O15417 2968 aaPredicted RBP14.2□□□□□ -0.14
PCNA-201ENST00000379143 INPP5BP32019 993 aa14.2□□□□□ -0.14
PCNA-201ENST00000379143 CAP2P40123 477 aa14.2□□□□□ -0.14
PCNA-201ENST00000379143 VGLL4Q14135 290 aa14.2□□□□□ -0.14
PCNA-201ENST00000379143 TATDN1Q6P1N9 297 aa14.2□□□□□ -0.14
PCNA-201ENST00000379143 SCYL3Q8IZE3 742 aa14.2□□□□□ -0.14
PCNA-201ENST00000379143 ZKSCAN4Q969J2 545 aaPredicted RBP14.2□□□□□ -0.14
PCNA-201ENST00000379143 DNAJC18Q9H819 358 aa14.2□□□□□ -0.14
PCNA-201ENST00000379143 PICK1Q9NRD5 415 aa14.2□□□□□ -0.14
PCNA-201ENST00000379143 FGAP02671 866 aa14.19□□□□□ -0.14
PCNA-201ENST00000379143 SLC10A3P09131 477 aa14.19□□□□□ -0.14
PCNA-201ENST00000379143 ZBTB48P10074 688 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms