RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 CCDC148Q8NFR7 591 aa9.34□□□□□ -0.91
PTPRR-203ENST00000378778 FBXW7Q969H0 707 aa9.34□□□□□ -0.91
PTPRR-203ENST00000378778 EIF3CQ99613 913 aaKnown RBP9.34□□□□□ -0.91
PTPRR-203ENST00000378778 MYD88Q99836 296 aa9.34□□□□□ -0.91
PTPRR-203ENST00000378778 ALG1Q9BT22 464 aa9.34□□□□□ -0.91
PTPRR-203ENST00000378778 MAN1B1Q9UKM7 699 aa9.34□□□□□ -0.91
PTPRR-203ENST00000378778 ANGEL1Q9UNK9 670 aaKnown RBP9.34□□□□□ -0.91
PTPRR-203ENST00000378778 AKAP2Q9Y2D5 859 aa9.34□□□□□ -0.91
PTPRR-203ENST00000378778 JRKLQ9Y4A0 524 aa9.34□□□□□ -0.91
PTPRR-203ENST00000378778 KIF28PB7ZC32 967 aa9.33□□□□□ -0.92
PTPRR-203ENST00000378778 GOLIM4O00461 696 aa9.33□□□□□ -0.92
PTPRR-203ENST00000378778 SHOX2O60902 331 aaPredicted RBP9.33□□□□□ -0.92
PTPRR-203ENST00000378778 IFIT1P09914 478 aaKnown RBP9.33□□□□□ -0.92
PTPRR-203ENST00000378778 CKAP4Q07065 602 aaKnown RBP9.33□□□□□ -0.92
PTPRR-203ENST00000378778 PNOCQ13519 176 aa9.33□□□□□ -0.92
PTPRR-203ENST00000378778 NKX1-1Q15270 411 aaPredicted RBP9.33□□□□□ -0.92
PTPRR-203ENST00000378778 KIF4BQ2VIQ3 1234 aa9.33□□□□□ -0.92
PTPRR-203ENST00000378778 RILPL1Q5EBL4 403 aa9.33□□□□□ -0.92
PTPRR-203ENST00000378778 KRT40Q6A162 431 aa9.33□□□□□ -0.92
PTPRR-203ENST00000378778 IQCEQ6IPM2 695 aa9.33□□□□□ -0.92
PTPRR-203ENST00000378778 AFAP1L1Q8TED9 768 aa9.33□□□□□ -0.92
PTPRR-203ENST00000378778 SPOCK2Q92563 424 aa9.33□□□□□ -0.92
PTPRR-203ENST00000378778 APPBP2Q92624 585 aa9.33□□□□□ -0.92
PTPRR-203ENST00000378778 MFAP3LO75121 409 aa9.33□□□□□ -0.92
PTPRR-203ENST00000378778 ATP2B1P20020 1258 aa9.33□□□□□ -0.92
PTPRR-203ENST00000378778 PTPREP23469 700 aa9.33□□□□□ -0.92
PTPRR-203ENST00000378778 FOSBP53539 338 aa9.33□□□□□ -0.92
PTPRR-203ENST00000378778 SAFBQ15424 915 aaKnown RBP eCLIP9.33□□□□□ -0.92
PTPRR-203ENST00000378778 WASHC4Q2M389 1173 aa9.33□□□□□ -0.92
PTPRR-203ENST00000378778 PLBD2Q8NHP8 589 aa9.33□□□□□ -0.92
PTPRR-203ENST00000378778 XAGE3Q8WTP9 111 aa9.33□□□□□ -0.92
PTPRR-203ENST00000378778 NCAPGQ9BPX3 1015 aa9.33□□□□□ -0.92
PTPRR-203ENST00000378778 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.33□□□□□ -0.92
PTPRR-203ENST00000378778 ABCB6Q9NP58 842 aa9.33□□□□□ -0.92
PTPRR-203ENST00000378778 NUP188Q5SRE5 1749 aa9.32□□□□□ -0.92
PTPRR-203ENST00000378778 H7C1W4 665 aa9.32□□□□□ -0.92
PTPRR-203ENST00000378778 NBPF14Q5TI25 921 aa9.32□□□□□ -0.92
PTPRR-203ENST00000378778 ZNF790Q6PG37 636 aa9.32□□□□□ -0.92
PTPRR-203ENST00000378778 MMS22LQ6ZRQ5 1243 aa9.32□□□□□ -0.92
PTPRR-203ENST00000378778 SGMS1Q86VZ5 419 aa9.32□□□□□ -0.92
PTPRR-203ENST00000378778 POTEDQ86YR6 584 aa9.32□□□□□ -0.92
PTPRR-203ENST00000378778 USHBP1Q8N6Y0 703 aa9.32□□□□□ -0.92
PTPRR-203ENST00000378778 SYTL4Q96C24 671 aaPredicted RBP9.32□□□□□ -0.92
PTPRR-203ENST00000378778 MYCBPQ99417 103 aaPredicted RBP9.32□□□□□ -0.92
PTPRR-203ENST00000378778 FOXP1Q9H334 677 aaPredicted RBP9.32□□□□□ -0.92
PTPRR-203ENST00000378778 PHF8Q9UPP1 1060 aa9.32□□□□□ -0.92
PTPRR-203ENST00000378778 ZNF213O14771 459 aa9.32□□□□□ -0.92
PTPRR-203ENST00000378778 SNRPA1P09661 255 aaKnown RBP9.32□□□□□ -0.92
PTPRR-203ENST00000378778 LIFRP42702 1097 aa9.32□□□□□ -0.92
PTPRR-203ENST00000378778 METAP2P50579 478 aaKnown RBP eCLIP9.32□□□□□ -0.92
PTPRR-203ENST00000378778 LONRF3Q496Y0 759 aa9.32□□□□□ -0.92
PTPRR-203ENST00000378778 CDKAL1Q5VV42 579 aa9.32□□□□□ -0.92
PTPRR-203ENST00000378778 LRRC31Q6UY01 552 aa9.32□□□□□ -0.92
PTPRR-203ENST00000378778 CYP26C1Q6V0L0 522 aa9.32□□□□□ -0.92
PTPRR-203ENST00000378778 ATG9AQ7Z3C6 839 aa9.32□□□□□ -0.92
PTPRR-203ENST00000378778 LRP10Q7Z4F1 713 aa9.32□□□□□ -0.92
PTPRR-203ENST00000378778 CCDC91Q7Z6B0 441 aa9.32□□□□□ -0.92
PTPRR-203ENST00000378778 MRPL44Q9H9J2 332 aaKnown RBP9.32□□□□□ -0.92
PTPRR-203ENST00000378778 LCMT1Q9UIC8 334 aa9.32□□□□□ -0.92
PTPRR-203ENST00000378778 FAN1Q9Y2M0 1017 aa9.32□□□□□ -0.92
PTPRR-203ENST00000378778 TJP1Q07157 1748 aa9.31□□□□□ -0.92
PTPRR-203ENST00000378778 BCL9LQ86UU0 1499 aa9.31□□□□□ -0.92
PTPRR-203ENST00000378778 LRRC10BA6NIK2 292 aa9.31□□□□□ -0.92
PTPRR-203ENST00000378778 EYA2O00167 538 aa9.31□□□□□ -0.92
PTPRR-203ENST00000378778 TRIM66O15016 1216 aa9.31□□□□□ -0.92
PTPRR-203ENST00000378778 MCM6Q14566 821 aa9.31□□□□□ -0.92
PTPRR-203ENST00000378778 ALX1Q15699 326 aa9.31□□□□□ -0.92
PTPRR-203ENST00000378778 COPS6Q7L5N1 327 aa9.31□□□□□ -0.92
PTPRR-203ENST00000378778 UBE3BQ7Z3V4 1068 aa9.31□□□□□ -0.92
PTPRR-203ENST00000378778 IGSF22Q8N9C0 903 aa9.31□□□□□ -0.92
PTPRR-203ENST00000378778 ANKRD20A12PQ8NF67 263 aa9.31□□□□□ -0.92
PTPRR-203ENST00000378778 ZNF512BQ96KM6 892 aaPredicted RBP9.31□□□□□ -0.92
PTPRR-203ENST00000378778 GSDMAQ96QA5 445 aa9.31□□□□□ -0.92
PTPRR-203ENST00000378778 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.31□□□□□ -0.92
PTPRR-203ENST00000378778 SLC52A2Q9HAB3 445 aa9.31□□□□□ -0.92
PTPRR-203ENST00000378778 ADD3Q9UEY8 706 aaKnown RBP9.31□□□□□ -0.92
PTPRR-203ENST00000378778 MYO5AQ9Y4I1 1855 aaKnown RBP9.31□□□□□ -0.92
PTPRR-203ENST00000378778 PSMD14O00487 310 aa9.31□□□□□ -0.92
PTPRR-203ENST00000378778 SH2B2O14492 632 aaPredicted RBP9.31□□□□□ -0.92
PTPRR-203ENST00000378778 MARCKSP29966 332 aaPredicted RBP9.31□□□□□ -0.92
PTPRR-203ENST00000378778 USP14P54578 494 aa9.31□□□□□ -0.92
PTPRR-203ENST00000378778 ITIH3Q06033 890 aa9.31□□□□□ -0.92
PTPRR-203ENST00000378778 PPP2R5BQ15173 497 aa9.31□□□□□ -0.92
PTPRR-203ENST00000378778 ZNF569Q5MCW4 686 aa9.31□□□□□ -0.92
PTPRR-203ENST00000378778 TADA2BQ86TJ2 420 aa9.31□□□□□ -0.92
PTPRR-203ENST00000378778 FOXP4Q8IVH2 680 aaPredicted RBP9.31□□□□□ -0.92
PTPRR-203ENST00000378778 NOSTRINQ8IVI9 506 aa9.31□□□□□ -0.92
PTPRR-203ENST00000378778 FAM177A1Q8N128 213 aaPredicted RBP9.31□□□□□ -0.92
PTPRR-203ENST00000378778 KLHDC4Q8TBB5 520 aa9.31□□□□□ -0.92
PTPRR-203ENST00000378778 TRERF1Q96PN7 1200 aa9.31□□□□□ -0.92
PTPRR-203ENST00000378778 PNKPQ96T60 521 aa9.31□□□□□ -0.92
PTPRR-203ENST00000378778 HAUS4Q9H6D7 363 aa9.31□□□□□ -0.92
PTPRR-203ENST00000378778 MYO6Q9UM54 1294 aa9.31□□□□□ -0.92
PTPRR-203ENST00000378778 SRPRBQ9Y5M8 271 aaKnown RBP9.31□□□□□ -0.92
PTPRR-203ENST00000378778 TIAM2Q8IVF5 1701 aa9.31□□□□□ -0.92
PTPRR-203ENST00000378778 LRP6O75581 1613 aa9.3□□□□□ -0.92
PTPRR-203ENST00000378778 M0R2C6 588 aa9.3□□□□□ -0.92
PTPRR-203ENST00000378778 IARSP41252 1262 aaKnown RBP9.3□□□□□ -0.92
PTPRR-203ENST00000378778 ADKP55263 362 aaKnown RBP9.3□□□□□ -0.92
PTPRR-203ENST00000378778 ANTXR2P58335 489 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms