RNA–Protein interactions for RNA: ENST00000378680.6

DMD-208, Transcript of dystrophin, humanhuman

TSL 1 (best) BASIC

Gene DMD, Length 1,858 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-208ENST00000378680 SGIP1Q9BQI5 828 aa22.15■■□□□ 1.14
DMD-208ENST00000378680 HPS5Q9UPZ3 1129 aa22.15■■□□□ 1.14
DMD-208ENST00000378680 SLC12A7Q9Y666 1083 aa22.15■■□□□ 1.14
DMD-208ENST00000378680 FLT1P17948 1338 aa22.14■■□□□ 1.14
DMD-208ENST00000378680 PTPDC1A2A3K4 754 aa22.14■■□□□ 1.13
DMD-208ENST00000378680 VPS37CA5D8V6 355 aaPredicted RBP22.14■■□□□ 1.13
DMD-208ENST00000378680 CPLX1O14810 134 aa22.14■■□□□ 1.13
DMD-208ENST00000378680 ZBTB43O43298 467 aa22.14■■□□□ 1.13
DMD-208ENST00000378680 PRDM1O75626 825 aa22.14■■□□□ 1.13
DMD-208ENST00000378680 METAP2P50579 478 aaKnown RBP eCLIP22.14■■□□□ 1.13
DMD-208ENST00000378680 HDLBPQ00341 1268 aaKnown RBP22.14■■□□□ 1.13
DMD-208ENST00000378680 CTDNEP1O95476 244 aa22.13■■□□□ 1.13
DMD-208ENST00000378680 CRKP46108 304 aa22.13■■□□□ 1.13
DMD-208ENST00000378680 KIAA0825Q8IV33 1275 aa22.13■■□□□ 1.13
DMD-208ENST00000378680 DDX11Q96FC9 970 aa22.13■■□□□ 1.13
DMD-208ENST00000378680 SAP30BPQ9UHR5 308 aaKnown RBP22.13■■□□□ 1.13
DMD-208ENST00000378680 ATP6V1DQ9Y5K8 247 aa22.13■■□□□ 1.13
DMD-208ENST00000378680 ZNF646O15015 1829 aaPredicted RBP22.13■■□□□ 1.13
DMD-208ENST00000378680 FOCADQ5VW36 1801 aa22.13■■□□□ 1.13
DMD-208ENST00000378680 ROBO3Q96MS0 1386 aa22.13■■□□□ 1.13
DMD-208ENST00000378680 SLC4A8Q2Y0W8 1093 aa22.13■■□□□ 1.13
DMD-208ENST00000378680 MCTP1Q6DN14 999 aa22.13■■□□□ 1.13
DMD-208ENST00000378680 ZSCAN10Q96SZ4 725 aaPredicted RBP22.13■■□□□ 1.13
DMD-208ENST00000378680 ZNF287Q9HBT7 754 aa22.13■■□□□ 1.13
DMD-208ENST00000378680 SENP2Q9HC62 589 aa22.13■■□□□ 1.13
DMD-208ENST00000378680 ZNF277Q9NRM2 450 aaPredicted RBP22.13■■□□□ 1.13
DMD-208ENST00000378680 USP40Q9NVE5 1235 aa22.13■■□□□ 1.13
DMD-208ENST00000378680 MTMR6Q9Y217 621 aa22.13■■□□□ 1.13
DMD-208ENST00000378680 TNKSO95271 1327 aa22.12■■□□□ 1.13
DMD-208ENST00000378680 MYH1P12882 1939 aa22.12■■□□□ 1.13
DMD-208ENST00000378680 BRCA1P38398 1863 aaKnown RBP22.12■■□□□ 1.13
DMD-208ENST00000378680 YDJCA8MPS7 323 aa22.12■■□□□ 1.13
DMD-208ENST00000378680 F13A1P00488 732 aa22.12■■□□□ 1.13
DMD-208ENST00000378680 EVX2Q03828 476 aa22.12■■□□□ 1.13
DMD-208ENST00000378680 CPLX2Q6PUV4 134 aaKnown RBP22.12■■□□□ 1.13
DMD-208ENST00000378680 RAB11FIP4Q86YS3 637 aa22.12■■□□□ 1.13
DMD-208ENST00000378680 PSME4Q14997 1843 aa22.11■■□□□ 1.13
DMD-208ENST00000378680 MICU3Q86XE3 530 aa22.11■■□□□ 1.13
DMD-208ENST00000378680 ZDHHC15Q96MV8 337 aa22.11■■□□□ 1.13
DMD-208ENST00000378680 MKNK2Q9HBH9 465 aa22.11■■□□□ 1.13
DMD-208ENST00000378680 TSPY2A6NKD2 308 aa22.11■■□□□ 1.13
DMD-208ENST00000378680 GOLGA8AA7E2F4 631 aa22.11■■□□□ 1.13
DMD-208ENST00000378680 CDKL5O76039 1030 aa22.11■■□□□ 1.13
DMD-208ENST00000378680 DDX60LQ5H9U9 1706 aaKnown RBP22.1■■□□□ 1.13
DMD-208ENST00000378680 MYO3BQ8WXR4 1341 aa22.1■■□□□ 1.13
DMD-208ENST00000378680 RBM5P52756 815 aaKnown RBP eCLIP22.1■■□□□ 1.13
DMD-208ENST00000378680 SEC23AQ15436 765 aa22.1■■□□□ 1.13
DMD-208ENST00000378680 NIM1KQ8IY84 436 aa22.1■■□□□ 1.13
DMD-208ENST00000378680 SERPINA10Q9UK55 444 aa22.1■■□□□ 1.13
DMD-208ENST00000378680 H3BQV1 296 aa22.09■■□□□ 1.13
DMD-208ENST00000378680 IARSP41252 1262 aaKnown RBP22.09■■□□□ 1.13
DMD-208ENST00000378680 PTGER2P43116 358 aa22.09■■□□□ 1.13
DMD-208ENST00000378680 PLCD1P51178 756 aa22.09■■□□□ 1.13
DMD-208ENST00000378680 RCAN1P53805 252 aa22.09■■□□□ 1.13
DMD-208ENST00000378680 PICALMQ13492 652 aa22.09■■□□□ 1.13
DMD-208ENST00000378680 IFIT1BQ5T764 474 aaKnown RBP22.09■■□□□ 1.13
DMD-208ENST00000378680 IFFO2Q5TF58 517 aa22.09■■□□□ 1.13
DMD-208ENST00000378680 APOBEC3HQ6NTF7 200 aaKnown RBP22.09■■□□□ 1.13
DMD-208ENST00000378680 DYNLL2Q96FJ2 89 aa22.09■■□□□ 1.13
DMD-208ENST00000378680 ADAMTSL1Q8N6G6 1762 aa22.09■■□□□ 1.13
DMD-208ENST00000378680 CDC42EP5Q6NZY7 148 aa22.09■■□□□ 1.13
DMD-208ENST00000378680 ZNF444Q8N0Y2 327 aaPredicted RBP22.09■■□□□ 1.13
DMD-208ENST00000378680 ENAHQ8N8S7 591 aaPredicted RBP22.09■■□□□ 1.13
DMD-208ENST00000378680 ECM29Q5VYK3 1845 aa22.08■■□□□ 1.13
DMD-208ENST00000378680 RXRAP19793 462 aa22.08■■□□□ 1.13
DMD-208ENST00000378680 FAM47AQ5JRC9 791 aa22.08■■□□□ 1.13
DMD-208ENST00000378680 TTC6Q86TZ1 520 aa22.08■■□□□ 1.13
DMD-208ENST00000378680 MYL10Q9BUA6 226 aa22.08■■□□□ 1.13
DMD-208ENST00000378680 TAOK3Q9H2K8 898 aa22.08■■□□□ 1.13
DMD-208ENST00000378680 NID2Q14112 1375 aa22.08■■□□□ 1.12
DMD-208ENST00000378680 WDHD1O75717 1129 aaPredicted RBP22.07■■□□□ 1.12
DMD-208ENST00000378680 CCDC178Q5BJE1 867 aa22.07■■□□□ 1.12
DMD-208ENST00000378680 RSBN1LQ6PCB5 846 aaPredicted RBP22.07■■□□□ 1.12
DMD-208ENST00000378680 C16orf86Q6ZW13 317 aa22.07■■□□□ 1.12
DMD-208ENST00000378680 CDC37L1Q7L3B6 337 aa22.07■■□□□ 1.12
DMD-208ENST00000378680 ZNF654Q8IZM8 581 aa22.07■■□□□ 1.12
DMD-208ENST00000378680 ZNRF3Q9ULT6 936 aa22.07■■□□□ 1.12
DMD-208ENST00000378680 FER1L6Q2WGJ9 1857 aa22.07■■□□□ 1.12
DMD-208ENST00000378680 CCDC196A0A1B0GTZ2 297 aa22.07■■□□□ 1.12
DMD-208ENST00000378680 ADD1P35611 737 aaKnown RBP22.07■■□□□ 1.12
DMD-208ENST00000378680 TFAP4Q01664 338 aa22.07■■□□□ 1.12
DMD-208ENST00000378680 SKOR2Q2VWA4 1001 aaPredicted RBP22.07■■□□□ 1.12
DMD-208ENST00000378680 CCDC144CPQ8IYA2 1237 aa22.07■■□□□ 1.12
DMD-208ENST00000378680 ORC3Q9UBD5 711 aaPredicted RBP22.07■■□□□ 1.12
DMD-208ENST00000378680 BCS1LQ9Y276 419 aa22.07■■□□□ 1.12
DMD-208ENST00000378680 TRAK2O60296 914 aa22.06■■□□□ 1.12
DMD-208ENST00000378680 RAD17O75943 681 aa22.06■■□□□ 1.12
DMD-208ENST00000378680 VIL1P09327 827 aaKnown RBP22.06■■□□□ 1.12
DMD-208ENST00000378680 CDC27P30260 824 aa22.06■■□□□ 1.12
DMD-208ENST00000378680 PPP2R5BQ15173 497 aa22.06■■□□□ 1.12
DMD-208ENST00000378680 RTN1Q16799 776 aa22.06■■□□□ 1.12
DMD-208ENST00000378680 CATIPQ7Z7H3 387 aa22.06■■□□□ 1.12
DMD-208ENST00000378680 PSMD14O00487 310 aa22.05■■□□□ 1.12
DMD-208ENST00000378680 CDK8P49336 464 aa22.05■■□□□ 1.12
DMD-208ENST00000378680 FOXD4L6Q3SYB3 417 aaPredicted RBP22.05■■□□□ 1.12
DMD-208ENST00000378680 FOXD4L3Q6VB84 417 aaPredicted RBP22.05■■□□□ 1.12
DMD-208ENST00000378680 NUP133Q8WUM0 1156 aa22.05■■□□□ 1.12
DMD-208ENST00000378680 DDX4Q9NQI0 724 aaKnown RBP22.05■■□□□ 1.12
DMD-208ENST00000378680 HDAC9Q9UKV0 1011 aa22.05■■□□□ 1.12
DMD-208ENST00000378680 TSPY3P0CV98 308 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms