RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 PRKAB2O43741 272 aa20.91■□□□□ 0.94
TDP2-202ENST00000378198 SERPINC1P01008 464 aa20.91■□□□□ 0.94
TDP2-202ENST00000378198 ATP1A3P13637 1013 aa20.91■□□□□ 0.94
TDP2-202ENST00000378198 DIS3L2Q8IYB7 885 aaKnown RBP20.91■□□□□ 0.94
TDP2-202ENST00000378198 ERO1AQ96HE7 468 aa20.91■□□□□ 0.94
TDP2-202ENST00000378198 PPP1R13BQ96KQ4 1090 aa20.91■□□□□ 0.94
TDP2-202ENST00000378198 SEC31BQ9NQW1 1179 aa20.91■□□□□ 0.94
TDP2-202ENST00000378198 TOMM22Q9NS69 142 aa20.91■□□□□ 0.94
TDP2-202ENST00000378198 PCDHA5Q9Y5H7 936 aa20.91■□□□□ 0.94
TDP2-202ENST00000378198 STK11IPQ8N1F8 1099 aa20.9■□□□□ 0.94
TDP2-202ENST00000378198 RREB1Q92766 1687 aa20.9■□□□□ 0.94
TDP2-202ENST00000378198 SNAP23O00161 211 aa20.9■□□□□ 0.94
TDP2-202ENST00000378198 GUCY1A2P33402 732 aa20.9■□□□□ 0.94
TDP2-202ENST00000378198 TOB1P50616 345 aaPredicted RBP20.9■□□□□ 0.94
TDP2-202ENST00000378198 BCAMP50895 628 aa20.9■□□□□ 0.94
TDP2-202ENST00000378198 NAA30Q147X3 362 aaPredicted RBP20.9■□□□□ 0.94
TDP2-202ENST00000378198 FOXP4Q8IVH2 680 aaPredicted RBP20.9■□□□□ 0.94
TDP2-202ENST00000378198 NOL10Q9BSC4 688 aaKnown RBP20.9■□□□□ 0.94
TDP2-202ENST00000378198 CCDC87Q9NVE4 849 aa20.9■□□□□ 0.94
TDP2-202ENST00000378198 ZNF215Q9UL58 517 aaPredicted RBP20.9■□□□□ 0.94
TDP2-202ENST00000378198 SLU7O95391 586 aaKnown RBP20.89■□□□□ 0.93
TDP2-202ENST00000378198 PTPREP23469 700 aa20.89■□□□□ 0.93
TDP2-202ENST00000378198 MDM2Q00987 491 aaPredicted RBP20.89■□□□□ 0.93
TDP2-202ENST00000378198 INTS5Q6P9B9 1019 aaKnown RBP20.89■□□□□ 0.93
TDP2-202ENST00000378198 CRACR2BQ8N4Y2 399 aaPredicted RBP20.89■□□□□ 0.93
TDP2-202ENST00000378198 ZKSCAN3Q9BRR0 538 aa20.89■□□□□ 0.93
TDP2-202ENST00000378198 LRP2BPQ9P2M1 347 aa20.89■□□□□ 0.93
TDP2-202ENST00000378198 CFAP100Q494V2 611 aa20.89■□□□□ 0.93
TDP2-202ENST00000378198 ZNF579Q8NAF0 562 aaKnown RBP20.89■□□□□ 0.93
TDP2-202ENST00000378198 OGFRQ9NZT2 677 aa20.89■□□□□ 0.93
TDP2-202ENST00000378198 FBXO2Q9UK22 296 aaPredicted RBP20.89■□□□□ 0.93
TDP2-202ENST00000378198 CEP131Q9UPN4 1083 aa20.89■□□□□ 0.93
TDP2-202ENST00000378198 PPP2R5BQ15173 497 aa20.88■□□□□ 0.93
TDP2-202ENST00000378198 FANCBQ8NB91 859 aa20.88■□□□□ 0.93
TDP2-202ENST00000378198 DPF2Q92785 391 aa20.88■□□□□ 0.93
TDP2-202ENST00000378198 KCNJ14Q9UNX9 436 aa20.88■□□□□ 0.93
TDP2-202ENST00000378198 SPDYE4A6NLX3 237 aa20.87■□□□□ 0.93
TDP2-202ENST00000378198 PPARAQ07869 468 aa20.87■□□□□ 0.93
TDP2-202ENST00000378198 VSTM4Q8IW00 320 aa20.87■□□□□ 0.93
TDP2-202ENST00000378198 ZNF654Q8IZM8 581 aa20.87■□□□□ 0.93
TDP2-202ENST00000378198 A0A1B0GUL6 1792 aa20.87■□□□□ 0.93
TDP2-202ENST00000378198 L2HGDHQ9H9P8 463 aa20.87■□□□□ 0.93
TDP2-202ENST00000378198 FANCLQ9NW38 375 aa20.87■□□□□ 0.93
TDP2-202ENST00000378198 DACH1Q9UI36 760 aa20.87■□□□□ 0.93
TDP2-202ENST00000378198 CAMTA2O94983 1202 aa20.86■□□□□ 0.93
TDP2-202ENST00000378198 CHRNDQ07001 517 aa20.86■□□□□ 0.93
TDP2-202ENST00000378198 POSTNQ15063 836 aa20.86■□□□□ 0.93
TDP2-202ENST00000378198 NT5DC1Q5TFE4 455 aa20.86■□□□□ 0.93
TDP2-202ENST00000378198 ZNF397Q8NF99 534 aaPredicted RBP20.86■□□□□ 0.93
TDP2-202ENST00000378198 UBAC1Q9BSL1 405 aa20.86■□□□□ 0.93
TDP2-202ENST00000378198 TMX1Q9H3N1 280 aa20.86■□□□□ 0.93
TDP2-202ENST00000378198 ANAPC4Q9UJX5 808 aa20.86■□□□□ 0.93
TDP2-202ENST00000378198 CICQ96RK0 1608 aaPredicted RBP20.86■□□□□ 0.93
TDP2-202ENST00000378198 TOP1P11387 765 aaKnown RBP20.85■□□□□ 0.93
TDP2-202ENST00000378198 CRKLP46109 303 aaKnown RBP20.85■□□□□ 0.93
TDP2-202ENST00000378198 KANK3Q6NY19 840 aa20.85■□□□□ 0.93
TDP2-202ENST00000378198 MIGA1Q8NAN2 632 aa20.85■□□□□ 0.93
TDP2-202ENST00000378198 MLKLQ8NB16 471 aa20.85■□□□□ 0.93
TDP2-202ENST00000378198 PRDM10Q9NQV6 1147 aa20.85■□□□□ 0.93
TDP2-202ENST00000378198 MAN1B1Q9UKM7 699 aa20.85■□□□□ 0.93
TDP2-202ENST00000378198 SRPRBQ9Y5M8 271 aaKnown RBP20.85■□□□□ 0.93
TDP2-202ENST00000378198 MYH2Q9UKX2 1941 aa20.85■□□□□ 0.93
TDP2-202ENST00000378198 COL16A1Q07092 1604 aaPredicted RBP20.85■□□□□ 0.93
TDP2-202ENST00000378198 NTSR2O95665 410 aa20.85■□□□□ 0.93
TDP2-202ENST00000378198 ZSCAN20P17040 1043 aaPredicted RBP20.85■□□□□ 0.93
TDP2-202ENST00000378198 CYP7A1P22680 504 aa20.85■□□□□ 0.93
TDP2-202ENST00000378198 SPECC1Q5M775 1068 aa20.85■□□□□ 0.93
TDP2-202ENST00000378198 UTP14CQ5TAP6 766 aaKnown RBP20.85■□□□□ 0.93
TDP2-202ENST00000378198 FCHSD1Q86WN1 690 aa20.85■□□□□ 0.93
TDP2-202ENST00000378198 TRIML1Q8N9V2 468 aa20.85■□□□□ 0.93
TDP2-202ENST00000378198 NUP133Q8WUM0 1156 aa20.85■□□□□ 0.93
TDP2-202ENST00000378198 RNF26Q9BY78 433 aaPredicted RBP20.85■□□□□ 0.93
TDP2-202ENST00000378198 MORC2Q9Y6X9 1032 aaPredicted RBP20.85■□□□□ 0.93
TDP2-202ENST00000378198 DLEC1Q9Y238 1755 aa20.85■□□□□ 0.93
TDP2-202ENST00000378198 FOXN1O15353 648 aa20.84■□□□□ 0.93
TDP2-202ENST00000378198 BMP6P22004 513 aa20.84■□□□□ 0.93
TDP2-202ENST00000378198 ATP6V1AP38606 617 aa20.84■□□□□ 0.93
TDP2-202ENST00000378198 SARSP49591 514 aaKnown RBP20.84■□□□□ 0.93
TDP2-202ENST00000378198 DMTNQ08495 405 aa20.84■□□□□ 0.93
TDP2-202ENST00000378198 SYT10Q6XYQ8 523 aa20.84■□□□□ 0.93
TDP2-202ENST00000378198 ESR2Q92731 530 aa20.84■□□□□ 0.93
TDP2-202ENST00000378198 CDC5LQ99459 802 aaKnown RBP20.84■□□□□ 0.93
TDP2-202ENST00000378198 SERTAD1Q9UHV2 236 aa20.84■□□□□ 0.93
TDP2-202ENST00000378198 PCDHB6Q9Y5E3 794 aa20.84■□□□□ 0.93
TDP2-202ENST00000378198 BCL9LQ86UU0 1499 aa20.84■□□□□ 0.93
TDP2-202ENST00000378198 POLR2DO15514 142 aaKnown RBP20.84■□□□□ 0.93
TDP2-202ENST00000378198 PDE4BQ07343 736 aa20.84■□□□□ 0.93
TDP2-202ENST00000378198 SEC23AQ15436 765 aa20.84■□□□□ 0.93
TDP2-202ENST00000378198 CCDC82Q8N4S0 544 aa20.84■□□□□ 0.93
TDP2-202ENST00000378198 SMARCE1Q969G3 411 aa20.84■□□□□ 0.93
TDP2-202ENST00000378198 CDCA7Q9BWT1 371 aaPredicted RBP20.84■□□□□ 0.93
TDP2-202ENST00000378198 DDX41Q9UJV9 622 aaKnown RBP20.84■□□□□ 0.93
TDP2-202ENST00000378198 MYH14Q7Z406 1995 aaKnown RBP20.83■□□□□ 0.93
TDP2-202ENST00000378198 MAGEB6P1A0A0J9YX57 407 aa20.83■□□□□ 0.93
TDP2-202ENST00000378198 XBP1P17861 261 aa20.83■□□□□ 0.93
TDP2-202ENST00000378198 GRIN1Q05586 938 aa20.83■□□□□ 0.93
TDP2-202ENST00000378198 NR5A1Q13285 461 aa20.83■□□□□ 0.93
TDP2-202ENST00000378198 ENOX1Q8TC92 643 aaKnown RBP20.83■□□□□ 0.93
TDP2-202ENST00000378198 GTPBP4Q9BZE4 634 aaKnown RBP20.83■□□□□ 0.93
TDP2-202ENST00000378198 NIP7Q9Y221 180 aaKnown RBP eCLIP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms