RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 ZHX2Q9Y6X8 837 aa14.03□□□□□ -0.16
SMARCE1-203ENST00000377808 COL2A1P02458 1487 aaPredicted RBP14.02□□□□□ -0.16
SMARCE1-203ENST00000377808 MAGEB6P1A0A0J9YX57 407 aa14.02□□□□□ -0.17
SMARCE1-203ENST00000377808 TBC1D12O60347 775 aa14.02□□□□□ -0.17
SMARCE1-203ENST00000377808 ATP5JP18859 108 aa14.02□□□□□ -0.17
SMARCE1-203ENST00000377808 CCDC84Q86UT8 332 aaPredicted RBP14.02□□□□□ -0.17
SMARCE1-203ENST00000377808 CERS3Q8IU89 383 aa14.02□□□□□ -0.17
SMARCE1-203ENST00000377808 HAUS7Q99871 368 aa14.02□□□□□ -0.17
SMARCE1-203ENST00000377808 ZBTB47Q9UFB7 747 aaPredicted RBP14.02□□□□□ -0.17
SMARCE1-203ENST00000377808 ZNF532Q9HCE3 1301 aa14.02□□□□□ -0.17
SMARCE1-203ENST00000377808 TRIM75PA6NK02 468 aa14.01□□□□□ -0.17
SMARCE1-203ENST00000377808 MAP3K10Q02779 954 aa14.01□□□□□ -0.17
SMARCE1-203ENST00000377808 NOM1Q5C9Z4 860 aaKnown RBP14.01□□□□□ -0.17
SMARCE1-203ENST00000377808 TSHZ3Q63HK5 1081 aa14.01□□□□□ -0.17
SMARCE1-203ENST00000377808 GADL1Q6ZQY3 521 aa14.01□□□□□ -0.17
SMARCE1-203ENST00000377808 CD99L2Q8TCZ2 262 aa14.01□□□□□ -0.17
SMARCE1-203ENST00000377808 ERO1AQ96HE7 468 aa14.01□□□□□ -0.17
SMARCE1-203ENST00000377808 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.01□□□□□ -0.17
SMARCE1-203ENST00000377808 ECHDC1Q9NTX5 307 aa14.01□□□□□ -0.17
SMARCE1-203ENST00000377808 HERC5Q9UII4 1024 aaKnown RBP14.01□□□□□ -0.17
SMARCE1-203ENST00000377808 KCNH4Q9UQ05 1017 aa14.01□□□□□ -0.17
SMARCE1-203ENST00000377808 TRIM17Q9Y577 477 aa14.01□□□□□ -0.17
SMARCE1-203ENST00000377808 DOCK1Q14185 1865 aa14.01□□□□□ -0.17
SMARCE1-203ENST00000377808 PDHXO00330 501 aa14□□□□□ -0.17
SMARCE1-203ENST00000377808 ECM2O94769 699 aaPredicted RBP14□□□□□ -0.17
SMARCE1-203ENST00000377808 SP3Q02447 781 aa14□□□□□ -0.17
SMARCE1-203ENST00000377808 TMED8Q6PL24 325 aaPredicted RBP14□□□□□ -0.17
SMARCE1-203ENST00000377808 CRNKL1Q9BZJ0 848 aaKnown RBP14□□□□□ -0.17
SMARCE1-203ENST00000377808 CDK5RAP2Q96SN8 1893 aa14□□□□□ -0.17
SMARCE1-203ENST00000377808 CXCL11O14625 94 aa13.99□□□□□ -0.17
SMARCE1-203ENST00000377808 GDF11O95390 407 aa13.99□□□□□ -0.17
SMARCE1-203ENST00000377808 POLR3DP05423 398 aaPredicted RBP13.99□□□□□ -0.17
SMARCE1-203ENST00000377808 PKN2Q16513 984 aaKnown RBP13.99□□□□□ -0.17
SMARCE1-203ENST00000377808 SLFNL1Q499Z3 407 aa13.99□□□□□ -0.17
SMARCE1-203ENST00000377808 ANKRD23Q86SG2 305 aa13.99□□□□□ -0.17
SMARCE1-203ENST00000377808 RIOK1Q9BRS2 568 aaKnown RBP13.99□□□□□ -0.17
SMARCE1-203ENST00000377808 FOCADQ5VW36 1801 aa13.99□□□□□ -0.17
SMARCE1-203ENST00000377808 ADD2P35612 726 aa13.98□□□□□ -0.17
SMARCE1-203ENST00000377808 CAP2P40123 477 aa13.98□□□□□ -0.17
SMARCE1-203ENST00000377808 FASTKD5Q7L8L6 764 aaKnown RBP13.98□□□□□ -0.17
SMARCE1-203ENST00000377808 FOXP4Q8IVH2 680 aaPredicted RBP13.98□□□□□ -0.17
SMARCE1-203ENST00000377808 LCORLQ8N3X6 602 aa13.98□□□□□ -0.17
SMARCE1-203ENST00000377808 ARMT1Q9H993 441 aa13.98□□□□□ -0.17
SMARCE1-203ENST00000377808 ZCCHC17Q9NP64 241 aaKnown RBP13.98□□□□□ -0.17
SMARCE1-203ENST00000377808 CPA4Q9UI42 421 aa13.98□□□□□ -0.17
SMARCE1-203ENST00000377808 AFG3L2Q9Y4W6 797 aa13.98□□□□□ -0.17
SMARCE1-203ENST00000377808 A0A0G2JLL6 359 aaPredicted RBP13.97□□□□□ -0.17
SMARCE1-203ENST00000377808 TCRBV5S4A2TA0A5A2 114 aa13.97□□□□□ -0.17
SMARCE1-203ENST00000377808 USP17L5A8MUK1 530 aa13.97□□□□□ -0.17
SMARCE1-203ENST00000377808 TLR2O60603 784 aa13.97□□□□□ -0.17
SMARCE1-203ENST00000377808 MBD4O95243 580 aa13.97□□□□□ -0.17
SMARCE1-203ENST00000377808 SPP2Q13103 211 aa13.97□□□□□ -0.17
SMARCE1-203ENST00000377808 RRP1BQ14684 758 aaKnown RBP13.97□□□□□ -0.17
SMARCE1-203ENST00000377808 KIF22Q14807 665 aa13.97□□□□□ -0.17
SMARCE1-203ENST00000377808 ANKRD45Q5TZF3 282 aa13.97□□□□□ -0.17
SMARCE1-203ENST00000377808 ZSCAN25Q6NSZ9 544 aa13.97□□□□□ -0.17
SMARCE1-203ENST00000377808 OTOP1Q7RTM1 612 aa13.97□□□□□ -0.17
SMARCE1-203ENST00000377808 PRRT2Q7Z6L0 340 aaPredicted RBP13.97□□□□□ -0.17
SMARCE1-203ENST00000377808 TTC6Q86TZ1 520 aa13.97□□□□□ -0.17
SMARCE1-203ENST00000377808 SDR42E1Q8WUS8 393 aa13.97□□□□□ -0.17
SMARCE1-203ENST00000377808 PARK7Q99497 189 aaKnown RBP13.97□□□□□ -0.17
SMARCE1-203ENST00000377808 DNAJC18Q9H819 358 aa13.97□□□□□ -0.17
SMARCE1-203ENST00000377808 EFCC1Q9HA90 598 aa13.97□□□□□ -0.17
SMARCE1-203ENST00000377808 AS3MTQ9HBK9 375 aa13.97□□□□□ -0.17
SMARCE1-203ENST00000377808 MCM9Q9NXL9 1143 aa13.97□□□□□ -0.17
SMARCE1-203ENST00000377808 HPS5Q9UPZ3 1129 aa13.97□□□□□ -0.17
SMARCE1-203ENST00000377808 SIPA1L1O43166 1804 aa13.97□□□□□ -0.17
SMARCE1-203ENST00000377808 MYH1P12882 1939 aa13.96□□□□□ -0.17
SMARCE1-203ENST00000377808 NAV1Q8NEY1 1877 aa13.96□□□□□ -0.17
SMARCE1-203ENST00000377808 ATAD5Q96QE3 1844 aa13.96□□□□□ -0.17
SMARCE1-203ENST00000377808 CHGBP05060 677 aa13.96□□□□□ -0.17
SMARCE1-203ENST00000377808 CYP2C8P10632 490 aa13.96□□□□□ -0.17
SMARCE1-203ENST00000377808 MAPK8IP2Q13387 824 aaPredicted RBP13.96□□□□□ -0.17
SMARCE1-203ENST00000377808 MOGSQ13724 837 aa13.96□□□□□ -0.17
SMARCE1-203ENST00000377808 FBXO46Q6PJ61 603 aaPredicted RBP13.96□□□□□ -0.17
SMARCE1-203ENST00000377808 PPP4R3CPQ6ZMV5 832 aa13.96□□□□□ -0.17
SMARCE1-203ENST00000377808 ZNF280CQ8ND82 737 aa13.96□□□□□ -0.17
SMARCE1-203ENST00000377808 SERPINB13Q9UIV8 391 aa13.96□□□□□ -0.17
SMARCE1-203ENST00000377808 ERC2O15083 957 aa13.95□□□□□ -0.18
SMARCE1-203ENST00000377808 ASNSP08243 561 aa13.95□□□□□ -0.18
SMARCE1-203ENST00000377808 HMGCS2P54868 508 aa13.95□□□□□ -0.18
SMARCE1-203ENST00000377808 ARHGEF6Q15052 776 aa13.95□□□□□ -0.18
SMARCE1-203ENST00000377808 SHROOM1Q2M3G4 852 aaPredicted RBP13.95□□□□□ -0.18
SMARCE1-203ENST00000377808 GPAT2Q6NUI2 795 aa13.95□□□□□ -0.18
SMARCE1-203ENST00000377808 OTUD7AQ8TE49 926 aaPredicted RBP13.95□□□□□ -0.18
SMARCE1-203ENST00000377808 TBC1D2Q9BYX2 928 aa13.95□□□□□ -0.18
SMARCE1-203ENST00000377808 SUPT16HQ9Y5B9 1047 aaKnown RBP13.95□□□□□ -0.18
SMARCE1-203ENST00000377808 PRKAB2O43741 272 aa13.94□□□□□ -0.18
SMARCE1-203ENST00000377808 PLCD1P51178 756 aa13.94□□□□□ -0.18
SMARCE1-203ENST00000377808 SOX10P56693 466 aa13.94□□□□□ -0.18
SMARCE1-203ENST00000377808 UBE3CQ15386 1083 aa13.94□□□□□ -0.18
SMARCE1-203ENST00000377808 EXOC6Q8TAG9 804 aa13.94□□□□□ -0.18
SMARCE1-203ENST00000377808 SMCR8Q8TEV9 937 aaPredicted RBP13.94□□□□□ -0.18
SMARCE1-203ENST00000377808 GCC1Q96CN9 775 aa13.94□□□□□ -0.18
SMARCE1-203ENST00000377808 DDRGK1Q96HY6 314 aa13.94□□□□□ -0.18
SMARCE1-203ENST00000377808 ZBTB21Q9ULJ3 1066 aa13.94□□□□□ -0.18
SMARCE1-203ENST00000377808 SLC4A4Q9Y6R1 1079 aa13.94□□□□□ -0.18
SMARCE1-203ENST00000377808 PHIPQ8WWQ0 1821 aa13.94□□□□□ -0.18
SMARCE1-203ENST00000377808 TTC41PQ6P2S7 1318 aa13.94□□□□□ -0.18
SMARCE1-203ENST00000377808 GH2P01242 217 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms