RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	LAMB2	P55268	1798 aa		13.59	□□□□□ -0.23
LMO7-204	ENST00000377499	PTPDC1	A2A3K4	754 aa		13.59	□□□□□ -0.23
LMO7-204	ENST00000377499	SMIM22	K7EJ46	135 aa		13.59	□□□□□ -0.23
LMO7-204	ENST00000377499	BRD1	O95696	1058 aa		13.59	□□□□□ -0.23
LMO7-204	ENST00000377499	METAP2	P50579	478 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
LMO7-204	ENST00000377499	WTAP	Q15007	396 aa		13.59	□□□□□ -0.23
LMO7-204	ENST00000377499	R3HDM1	Q15032	1099 aa	Known RBP	13.59	□□□□□ -0.23
LMO7-204	ENST00000377499	ALX1	Q15699	326 aa		13.59	□□□□□ -0.23
LMO7-204	ENST00000377499	KLRG2	A4D1S0	409 aa	Predicted RBP	13.59	□□□□□ -0.23
LMO7-204	ENST00000377499	USP17L8	P0C7I0	530 aa		13.59	□□□□□ -0.23
LMO7-204	ENST00000377499	CYP2D6	P10635	497 aa		13.59	□□□□□ -0.23
LMO7-204	ENST00000377499	PTMS	P20962	102 aa		13.59	□□□□□ -0.23
LMO7-204	ENST00000377499	KIAA0825	Q8IV33	1275 aa		13.59	□□□□□ -0.23
LMO7-204	ENST00000377499	ZNF384	Q8TF68	577 aa		13.59	□□□□□ -0.23
LMO7-204	ENST00000377499	TSPY2	A6NKD2	308 aa		13.59	□□□□□ -0.23
LMO7-204	ENST00000377499	GOLGA8A	A7E2F4	631 aa		13.59	□□□□□ -0.23
LMO7-204	ENST00000377499	PPIP5K2	O43314	1243 aa		13.59	□□□□□ -0.23
LMO7-204	ENST00000377499	U2AF2	P26368	475 aa	Known RBP eCLIP	13.59	□□□□□ -0.23	2e-7	■■■□□ 18.7
LMO7-204	ENST00000377499	GNL2	Q13823	731 aa	Known RBP	13.59	□□□□□ -0.23
LMO7-204	ENST00000377499	GPATCH11	Q8N954	259 aa		13.59	□□□□□ -0.23
LMO7-204	ENST00000377499	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.59	□□□□□ -0.23
LMO7-204	ENST00000377499	PSD	A5PKW4	1024 aa	Predicted RBP	13.58	□□□□□ -0.24
LMO7-204	ENST00000377499	ZBTB43	O43298	467 aa		13.58	□□□□□ -0.24
LMO7-204	ENST00000377499	AOC3	Q16853	763 aa		13.58	□□□□□ -0.24
LMO7-204	ENST00000377499	IQCA1	Q86XH1	822 aa		13.58	□□□□□ -0.24
LMO7-204	ENST00000377499	COL24A1	Q17RW2	1714 aa		13.58	□□□□□ -0.24
LMO7-204	ENST00000377499	PFKFB2	O60825	505 aa		13.58	□□□□□ -0.24
LMO7-204	ENST00000377499	ANTXR2	P58335	489 aa		13.58	□□□□□ -0.24
LMO7-204	ENST00000377499	PDE4B	Q07343	736 aa		13.58	□□□□□ -0.24
LMO7-204	ENST00000377499	CCDC173	Q0VFZ6	552 aa		13.58	□□□□□ -0.24
LMO7-204	ENST00000377499	FAM47A	Q5JRC9	791 aa		13.58	□□□□□ -0.24
LMO7-204	ENST00000377499	SASS6	Q6UVJ0	657 aa		13.58	□□□□□ -0.24
LMO7-204	ENST00000377499	TTLL6	Q8N841	843 aa		13.58	□□□□□ -0.24
LMO7-204	ENST00000377499	NBPF3	Q9H094	633 aa		13.58	□□□□□ -0.24
LMO7-204	ENST00000377499	DCP1A	Q9NPI6	582 aa	Predicted RBP	13.58	□□□□□ -0.24
LMO7-204	ENST00000377499	CEBPZ	Q03701	1054 aa	Known RBP	13.58	□□□□□ -0.24
LMO7-204	ENST00000377499	ST3GAL1	Q11201	340 aa		13.58	□□□□□ -0.24
LMO7-204	ENST00000377499	STYK1	Q6J9G0	422 aa		13.58	□□□□□ -0.24
LMO7-204	ENST00000377499	FAM173B	Q6P4H8	233 aa		13.58	□□□□□ -0.24
LMO7-204	ENST00000377499	F13A1	P00488	732 aa		13.57	□□□□□ -0.24
LMO7-204	ENST00000377499	CTR9	Q6PD62	1173 aa		13.57	□□□□□ -0.24
LMO7-204	ENST00000377499	TMEM87B	Q96K49	555 aa		13.57	□□□□□ -0.24
LMO7-204	ENST00000377499	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.57	□□□□□ -0.24
LMO7-204	ENST00000377499	ATP8A2	Q9NTI2	1148 aa		13.57	□□□□□ -0.24
LMO7-204	ENST00000377499	GOLGA6L4	A6NEF3	574 aa		13.57	□□□□□ -0.24
LMO7-204	ENST00000377499	BANK1	Q8NDB2	785 aa		13.57	□□□□□ -0.24
LMO7-204	ENST00000377499	ZNF274	Q96GC6	653 aa	Predicted RBP	13.57	□□□□□ -0.24
LMO7-204	ENST00000377499	ORC3	Q9UBD5	711 aa	Predicted RBP	13.57	□□□□□ -0.24
LMO7-204	ENST00000377499	IL1R1	P14778	569 aa		13.56	□□□□□ -0.24
LMO7-204	ENST00000377499	ADD1	P35611	737 aa	Known RBP	13.56	□□□□□ -0.24
LMO7-204	ENST00000377499	HMGN5	P82970	282 aa	Known RBP	13.56	□□□□□ -0.24
LMO7-204	ENST00000377499	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.56	□□□□□ -0.24
LMO7-204	ENST00000377499	CDC37L1	Q7L3B6	337 aa		13.56	□□□□□ -0.24
LMO7-204	ENST00000377499	SENP2	Q9HC62	589 aa		13.56	□□□□□ -0.24
LMO7-204	ENST00000377499	KCNQ5	Q9NR82	932 aa		13.56	□□□□□ -0.24
LMO7-204	ENST00000377499	ISY1	Q9ULR0	285 aa	Known RBP	13.56	□□□□□ -0.24
LMO7-204	ENST00000377499	PTMA	P06454	111 aa	Known RBP	13.56	□□□□□ -0.24
LMO7-204	ENST00000377499	DPEP1	P16444	411 aa		13.56	□□□□□ -0.24
LMO7-204	ENST00000377499	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.56	□□□□□ -0.24
LMO7-204	ENST00000377499	ZNF444	Q8N0Y2	327 aa	Predicted RBP	13.56	□□□□□ -0.24
LMO7-204	ENST00000377499	TIGD1	Q96MW7	591 aa		13.56	□□□□□ -0.24
LMO7-204	ENST00000377499	CNPY2	Q9Y2B0	182 aa		13.56	□□□□□ -0.24
LMO7-204	ENST00000377499	MROH7-TTC4	A0A0A0MT08	1334 aa		13.56	□□□□□ -0.24
LMO7-204	ENST00000377499	TERF1	P54274	439 aa		13.56	□□□□□ -0.24
LMO7-204	ENST00000377499	LARGE2	Q8N3Y3	721 aa		13.56	□□□□□ -0.24
LMO7-204	ENST00000377499	PIBF1	Q8WXW3	757 aa		13.56	□□□□□ -0.24
LMO7-204	ENST00000377499	DYNLL2	Q96FJ2	89 aa		13.56	□□□□□ -0.24
LMO7-204	ENST00000377499	TFIP11	Q9UBB9	837 aa	Known RBP	13.56	□□□□□ -0.24
LMO7-204	ENST00000377499	EVX2	Q03828	476 aa		13.55	□□□□□ -0.24
LMO7-204	ENST00000377499	DNM1	Q05193	864 aa	Known RBP	13.55	□□□□□ -0.24
LMO7-204	ENST00000377499	IFIT1B	Q5T764	474 aa	Known RBP	13.55	□□□□□ -0.24
LMO7-204	ENST00000377499	CAVIN1	Q6NZI2	390 aa	Known RBP	13.55	□□□□□ -0.24
LMO7-204	ENST00000377499	STAG1	Q8WVM7	1258 aa		13.55	□□□□□ -0.24
LMO7-204	ENST00000377499	ARPP21	Q9UBL0	812 aa	Predicted RBP	13.55	□□□□□ -0.24
LMO7-204	ENST00000377499	MTMR6	Q9Y217	621 aa		13.55	□□□□□ -0.24
LMO7-204	ENST00000377499	PDS5A	Q29RF7	1337 aa	Known RBP	13.55	□□□□□ -0.24
LMO7-204	ENST00000377499	SH2B2	O14492	632 aa	Predicted RBP	13.55	□□□□□ -0.24
LMO7-204	ENST00000377499	ECE2	O60344	883 aa		13.55	□□□□□ -0.24
LMO7-204	ENST00000377499	AKAP17A	Q02040	695 aa	Known RBP	13.55	□□□□□ -0.24
LMO7-204	ENST00000377499	NKX2-3	Q8TAU0	364 aa		13.55	□□□□□ -0.24
LMO7-204	ENST00000377499	PLCG2	P16885	1265 aa		13.55	□□□□□ -0.24
LMO7-204	ENST00000377499	OTUD7B	Q6GQQ9	843 aa		13.55	□□□□□ -0.24
LMO7-204	ENST00000377499	C15orf52	Q6ZUT6	534 aa	Known RBP	13.55	□□□□□ -0.24
LMO7-204	ENST00000377499	NSUN7	Q8NE18	718 aa	Known RBP	13.55	□□□□□ -0.24
LMO7-204	ENST00000377499	PHKB	Q93100	1093 aa		13.55	□□□□□ -0.24
LMO7-204	ENST00000377499	TNKS	O95271	1327 aa		13.54	□□□□□ -0.24
LMO7-204	ENST00000377499	TRIM29	Q14134	588 aa		13.54	□□□□□ -0.24
LMO7-204	ENST00000377499	CMTR1	Q8N1G2	835 aa	Known RBP	13.54	□□□□□ -0.24
LMO7-204	ENST00000377499	C8orf76	Q96K31	380 aa		13.54	□□□□□ -0.24
LMO7-204	ENST00000377499	SLC26A6	Q9BXS9	759 aa		13.54	□□□□□ -0.24
LMO7-204	ENST00000377499	USP40	Q9NVE5	1235 aa		13.54	□□□□□ -0.24
LMO7-204	ENST00000377499	RAD21	O60216	631 aa		13.54	□□□□□ -0.24
LMO7-204	ENST00000377499	APOA5	Q6Q788	366 aa		13.54	□□□□□ -0.24
LMO7-204	ENST00000377499	PDCL2	Q8N4E4	241 aa		13.54	□□□□□ -0.24
LMO7-204	ENST00000377499	SLC16A10	Q8TF71	515 aa		13.54	□□□□□ -0.24
LMO7-204	ENST00000377499	STX8	Q9UNK0	236 aa		13.54	□□□□□ -0.24
LMO7-204	ENST00000377499	MYH7	P12883	1935 aa		13.54	□□□□□ -0.24
LMO7-204	ENST00000377499	CDKL5	O76039	1030 aa		13.54	□□□□□ -0.24
LMO7-204	ENST00000377499	IARS	P41252	1262 aa	Known RBP	13.54	□□□□□ -0.24
LMO7-204	ENST00000377499	PSEN1	P49768	467 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms