RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 TOGARAM1Q9Y4F4 1720 aa20.81■□□□□ 0.92
SF1-203ENST00000377387 PSDA5PKW4 1024 aaPredicted RBP20.81■□□□□ 0.92
SF1-203ENST00000377387 FMNL1O95466 1100 aaPredicted RBP20.81■□□□□ 0.92
SF1-203ENST00000377387 SUSD4Q5VX71 490 aa20.81■□□□□ 0.92
SF1-203ENST00000377387 TRIM22Q8IYM9 498 aa20.81■□□□□ 0.92
SF1-203ENST00000377387 ZNF512BQ96KM6 892 aaPredicted RBP20.81■□□□□ 0.92
SF1-203ENST00000377387 KIF2AO00139 706 aaPredicted RBP20.81■□□□□ 0.92
SF1-203ENST00000377387 URI1O94763 535 aaPredicted RBP20.81■□□□□ 0.92
SF1-203ENST00000377387 CABP5Q9NP86 173 aa20.81■□□□□ 0.92
SF1-203ENST00000377387 C4AP0C0L4 1744 aa20.8■□□□□ 0.92
SF1-203ENST00000377387 C4BP0C0L5 1744 aa20.8■□□□□ 0.92
SF1-203ENST00000377387 ERICH2A1L162 156 aa20.8■□□□□ 0.92
SF1-203ENST00000377387 MMP1P03956 469 aa20.8■□□□□ 0.92
SF1-203ENST00000377387 ADKP55263 362 aaKnown RBP20.8■□□□□ 0.92
SF1-203ENST00000377387 FAM205CA6NFA0 338 aa20.8■□□□□ 0.92
SF1-203ENST00000377387 WTIPA6NIX2 430 aaPredicted RBP20.8■□□□□ 0.92
SF1-203ENST00000377387 CBFA2T2O43439 604 aa20.8■□□□□ 0.92
SF1-203ENST00000377387 FGFR2P21802 821 aa20.8■□□□□ 0.92
SF1-203ENST00000377387 LIFRP42702 1097 aa20.8■□□□□ 0.92
SF1-203ENST00000377387 FMR1Q06787 632 aaKnown RBP eCLIP20.8■□□□□ 0.921e-11■□□□□ 9.6
SF1-203ENST00000377387 ZNF771Q7L3S4 317 aaPredicted RBP20.8■□□□□ 0.92
SF1-203ENST00000377387 KDM4FA0A1W2PPD8 638 aa20.79■□□□□ 0.92
SF1-203ENST00000377387 SMIM5Q71RC9 77 aa20.79■□□□□ 0.92
SF1-203ENST00000377387 GTPBP4Q9BZE4 634 aaKnown RBP20.79■□□□□ 0.92
SF1-203ENST00000377387 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.79■□□□□ 0.92
SF1-203ENST00000377387 ST7Q9NRC1 585 aa20.79■□□□□ 0.92
SF1-203ENST00000377387 INTS13Q9NVM9 706 aa20.79■□□□□ 0.92
SF1-203ENST00000377387 MAN1B1Q9UKM7 699 aa20.79■□□□□ 0.92
SF1-203ENST00000377387 NFE2L3Q9Y4A8 694 aa20.79■□□□□ 0.92
SF1-203ENST00000377387 IFNAR1P17181 557 aa20.79■□□□□ 0.92
SF1-203ENST00000377387 CASP1P29466 404 aa20.79■□□□□ 0.92
SF1-203ENST00000377387 POSTNQ15063 836 aa20.79■□□□□ 0.92
SF1-203ENST00000377387 VSTM4Q8IW00 320 aa20.79■□□□□ 0.92
SF1-203ENST00000377387 SHANK3Q9BYB0 1731 aa20.78■□□□□ 0.92
SF1-203ENST00000377387 SART3Q15020 963 aaKnown RBP20.78■□□□□ 0.92
SF1-203ENST00000377387 UTP14CQ5TAP6 766 aaKnown RBP20.78■□□□□ 0.92
SF1-203ENST00000377387 NACAP1Q9BZK3 213 aa20.78■□□□□ 0.92
SF1-203ENST00000377387 KRT23Q9C075 422 aa20.78■□□□□ 0.92
SF1-203ENST00000377387 PRDM1O75626 825 aa20.78■□□□□ 0.92
SF1-203ENST00000377387 KCNQ4P56696 695 aa20.78■□□□□ 0.92
SF1-203ENST00000377387 ETF1P62495 437 aaKnown RBP20.78■□□□□ 0.92
SF1-203ENST00000377387 KLHL10Q6JEL2 608 aa20.78■□□□□ 0.92
SF1-203ENST00000377387 MROH5Q6ZUA9 1318 aa20.78■□□□□ 0.92
SF1-203ENST00000377387 AFMP43652 599 aa20.77■□□□□ 0.92
SF1-203ENST00000377387 CNNM2Q9H8M5 875 aa20.77■□□□□ 0.92
SF1-203ENST00000377387 KCND1Q9NSA2 647 aa20.77■□□□□ 0.92
SF1-203ENST00000377387 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.77■□□□□ 0.921e-8■□□□□ 11.3
SF1-203ENST00000377387 ALX1Q15699 326 aa20.77■□□□□ 0.92
SF1-203ENST00000377387 ARHGAP29Q52LW3 1261 aa20.77■□□□□ 0.92
SF1-203ENST00000377387 UBAC1Q9BSL1 405 aa20.77■□□□□ 0.92
SF1-203ENST00000377387 SAMSN1Q9NSI8 373 aaKnown RBP20.77■□□□□ 0.92
SF1-203ENST00000377387 CYP2D7A0A087X1C5 515 aa20.77■□□□□ 0.91
SF1-203ENST00000377387 CYP7A1P22680 504 aa20.77■□□□□ 0.91
SF1-203ENST00000377387 WASF1Q92558 559 aa20.77■□□□□ 0.91
SF1-203ENST00000377387 SMARCE1Q969G3 411 aa20.77■□□□□ 0.91
SF1-203ENST00000377387 EPC1Q9H2F5 836 aa20.77■□□□□ 0.91
SF1-203ENST00000377387 VPS54Q9P1Q0 977 aa20.77■□□□□ 0.91
SF1-203ENST00000377387 FBXO2Q9UK22 296 aaPredicted RBP20.77■□□□□ 0.91
SF1-203ENST00000377387 BAZ2BQ9UIF8 2168 aaKnown RBP20.76■□□□□ 0.91
SF1-203ENST00000377387 FANCGO15287 622 aa20.76■□□□□ 0.91
SF1-203ENST00000377387 STX17P56962 302 aa20.76■□□□□ 0.91
SF1-203ENST00000377387 MDM2Q00987 491 aaPredicted RBP20.76■□□□□ 0.91
SF1-203ENST00000377387 CRACR2BQ8N4Y2 399 aaPredicted RBP20.76■□□□□ 0.91
SF1-203ENST00000377387 CSRNP2Q9H175 543 aa20.76■□□□□ 0.91
SF1-203ENST00000377387 MORC2Q9Y6X9 1032 aaPredicted RBP20.76■□□□□ 0.91
SF1-203ENST00000377387 COBLO75128 1261 aa20.76■□□□□ 0.91
SF1-203ENST00000377387 ADGRA1Q86SQ6 560 aa20.76■□□□□ 0.91
SF1-203ENST00000377387 ZNF654Q8IZM8 581 aa20.76■□□□□ 0.91
SF1-203ENST00000377387 FANCBQ8NB91 859 aa20.76■□□□□ 0.91
SF1-203ENST00000377387 DHX58Q96C10 678 aa20.76■□□□□ 0.91
SF1-203ENST00000377387 L2HGDHQ9H9P8 463 aa20.76■□□□□ 0.91
SF1-203ENST00000377387 ZNF446Q9NWS9 450 aa20.76■□□□□ 0.91
SF1-203ENST00000377387 ATRNO75882 1429 aa20.76■□□□□ 0.91
SF1-203ENST00000377387 GOLGB1Q14789 3259 aaKnown RBP20.76■□□□□ 0.91
SF1-203ENST00000377387 RAI14Q9P0K7 980 aa20.75■□□□□ 0.91
SF1-203ENST00000377387 PTPREP23469 700 aa20.75■□□□□ 0.91
SF1-203ENST00000377387 TRIM65Q6PJ69 517 aa20.75■□□□□ 0.91
SF1-203ENST00000377387 ZNF34Q8IZ26 560 aa20.75■□□□□ 0.91
SF1-203ENST00000377387 KRT222Q8N1A0 295 aa20.75■□□□□ 0.91
SF1-203ENST00000377387 CPLX3Q8WVH0 158 aa20.75■□□□□ 0.91
SF1-203ENST00000377387 STAMQ92783 540 aa20.75■□□□□ 0.91
SF1-203ENST00000377387 DESI2Q9BSY9 194 aa20.75■□□□□ 0.91
SF1-203ENST00000377387 CARD6Q9BX69 1037 aa20.75■□□□□ 0.91
SF1-203ENST00000377387 EXOC5O00471 708 aa20.74■□□□□ 0.91
SF1-203ENST00000377387 REXO1L1PQ8IX06 675 aa20.74■□□□□ 0.91
SF1-203ENST00000377387 MNS1Q8NEH6 495 aa20.74■□□□□ 0.91
SF1-203ENST00000377387 EPSTI1Q96J88 318 aa20.74■□□□□ 0.91
SF1-203ENST00000377387 HOOK1Q9UJC3 728 aaKnown RBP20.74■□□□□ 0.91
SF1-203ENST00000377387 FAM237AA0A1B0GTK4 181 aa20.74■□□□□ 0.91
SF1-203ENST00000377387 CCDC93Q567U6 631 aa20.74■□□□□ 0.91
SF1-203ENST00000377387 PAPPAQ13219 1627 aa20.74■□□□□ 0.91
SF1-203ENST00000377387 DEXIO95424 95 aa20.74■□□□□ 0.91
SF1-203ENST00000377387 AKAP17AQ02040 695 aaKnown RBP20.74■□□□□ 0.91
SF1-203ENST00000377387 PPARAQ07869 468 aa20.74■□□□□ 0.91
SF1-203ENST00000377387 RILPL1Q5EBL4 403 aa20.74■□□□□ 0.91
SF1-203ENST00000377387 EARS2Q5JPH6 523 aaKnown RBP20.74■□□□□ 0.91
SF1-203ENST00000377387 BAG1Q99933 345 aaPredicted RBP20.74■□□□□ 0.91
SF1-203ENST00000377387 GYG1P46976 350 aa20.73■□□□□ 0.91
SF1-203ENST00000377387 UBXN4Q92575 508 aa20.73■□□□□ 0.91
SF1-203ENST00000377387 PPP2R2CQ9Y2T4 447 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms