RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 VPS37DQ86XT2 251 aa19.75■□□□□ 0.75
TRIM27-201ENST00000377194 ZBTB9Q96C00 473 aa19.75■□□□□ 0.75
TRIM27-201ENST00000377194 ABCF2Q9UG63 623 aa19.75■□□□□ 0.75
TRIM27-201ENST00000377194 PNPLA7Q6ZV29 1317 aa19.75■□□□□ 0.75
TRIM27-201ENST00000377194 GOLGA8AA7E2F4 631 aa19.75■□□□□ 0.75
TRIM27-201ENST00000377194 CAVIN2O95810 425 aa19.75■□□□□ 0.75
TRIM27-201ENST00000377194 AXDND1Q5T1B0 1012 aaPredicted RBP19.75■□□□□ 0.75
TRIM27-201ENST00000377194 FBXW7Q969H0 707 aa19.75■□□□□ 0.75
TRIM27-201ENST00000377194 CDC5LQ99459 802 aaKnown RBP19.75■□□□□ 0.75
TRIM27-201ENST00000377194 LTBP4Q8N2S1 1624 aa19.75■□□□□ 0.75
TRIM27-201ENST00000377194 WDHD1O75717 1129 aaPredicted RBP19.74■□□□□ 0.75
TRIM27-201ENST00000377194 STX1AQ16623 288 aa19.74■□□□□ 0.75
TRIM27-201ENST00000377194 SDR42E1Q8WUS8 393 aa19.74■□□□□ 0.75
TRIM27-201ENST00000377194 FHOD1Q9Y613 1164 aa19.74■□□□□ 0.75
TRIM27-201ENST00000377194 SLC12A7Q9Y666 1083 aa19.74■□□□□ 0.75
TRIM27-201ENST00000377194 CYP7A1P22680 504 aa19.74■□□□□ 0.75
TRIM27-201ENST00000377194 MARCKSP29966 332 aaPredicted RBP19.74■□□□□ 0.75
TRIM27-201ENST00000377194 IARSP41252 1262 aaKnown RBP19.74■□□□□ 0.75
TRIM27-201ENST00000377194 CCAR2Q8N163 923 aaKnown RBP19.74■□□□□ 0.75
TRIM27-201ENST00000377194 SDF4Q9BRK5 362 aa19.74■□□□□ 0.75
TRIM27-201ENST00000377194 TOMM22Q9NS69 142 aa19.74■□□□□ 0.75
TRIM27-201ENST00000377194 ZNF804BA4D1E1 1349 aa19.74■□□□□ 0.75
TRIM27-201ENST00000377194 BECN2A8MW95 431 aa19.73■□□□□ 0.75
TRIM27-201ENST00000377194 CDKL5O76039 1030 aa19.73■□□□□ 0.75
TRIM27-201ENST00000377194 CLCN6P51797 869 aa19.73■□□□□ 0.75
TRIM27-201ENST00000377194 SLC20A2Q08357 652 aa19.73■□□□□ 0.75
TRIM27-201ENST00000377194 RAD51AP2Q09MP3 1159 aa19.73■□□□□ 0.75
TRIM27-201ENST00000377194 BMS1Q14692 1282 aaKnown RBP19.73■□□□□ 0.75
TRIM27-201ENST00000377194 ANKRD18AQ8IVF6 992 aa19.73■□□□□ 0.75
TRIM27-201ENST00000377194 FEZ2Q9UHY8 353 aaPredicted RBP19.73■□□□□ 0.75
TRIM27-201ENST00000377194 SF3B3Q15393 1217 aaKnown RBP19.73■□□□□ 0.75
TRIM27-201ENST00000377194 STAG1Q8WVM7 1258 aa19.73■□□□□ 0.75
TRIM27-201ENST00000377194 CELF1Q92879 486 aaKnown RBP19.73■□□□□ 0.75
TRIM27-201ENST00000377194 GNAT2P19087 354 aa19.72■□□□□ 0.75
TRIM27-201ENST00000377194 GUCY1A2P33402 732 aa19.72■□□□□ 0.75
TRIM27-201ENST00000377194 TBC1D9BQ66K14 1250 aa19.72■□□□□ 0.75
TRIM27-201ENST00000377194 CPLX2Q6PUV4 134 aaKnown RBP19.72■□□□□ 0.75
TRIM27-201ENST00000377194 DHX40Q8IX18 779 aaKnown RBP19.72■□□□□ 0.75
TRIM27-201ENST00000377194 ZFP91Q96JP5 570 aaPredicted RBP19.72■□□□□ 0.75
TRIM27-201ENST00000377194 NACAP1Q9BZK3 213 aa19.72■□□□□ 0.75
TRIM27-201ENST00000377194 KRT23Q9C075 422 aa19.72■□□□□ 0.75
TRIM27-201ENST00000377194 CNNM2Q9H8M5 875 aa19.72■□□□□ 0.75
TRIM27-201ENST00000377194 MINPP1Q9UNW1 487 aa19.72■□□□□ 0.75
TRIM27-201ENST00000377194 COL1A1P02452 1464 aaPredicted RBP19.72■□□□□ 0.75
TRIM27-201ENST00000377194 SLC39A14Q15043 492 aa19.72■□□□□ 0.75
TRIM27-201ENST00000377194 SLC26A6Q9BXS9 759 aa19.72■□□□□ 0.75
TRIM27-201ENST00000377194 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.72■□□□□ 0.75
TRIM27-201ENST00000377194 PLA2G4AP47712 749 aa19.71■□□□□ 0.75
TRIM27-201ENST00000377194 CMTR1Q8N1G2 835 aaKnown RBP19.71■□□□□ 0.75
TRIM27-201ENST00000377194 BSDC1Q9NW68 430 aaPredicted RBP19.71■□□□□ 0.75
TRIM27-201ENST00000377194 CICQ96RK0 1608 aaPredicted RBP19.71■□□□□ 0.75
TRIM27-201ENST00000377194 COL5A3P25940 1745 aaPredicted RBP19.71■□□□□ 0.75
TRIM27-201ENST00000377194 RAI14Q9P0K7 980 aa19.71■□□□□ 0.75
TRIM27-201ENST00000377194 CHD4Q14839 1912 aa19.71■□□□□ 0.75
TRIM27-201ENST00000377194 MROH7-TTC4A0A0A0MT08 1334 aa19.71■□□□□ 0.75
TRIM27-201ENST00000377194 LAMB2P55268 1798 aa19.71■□□□□ 0.75
TRIM27-201ENST00000377194 ZNF202O95125 648 aa19.7■□□□□ 0.74
TRIM27-201ENST00000377194 PNMA6AP0CW24 399 aaPredicted RBP19.7■□□□□ 0.74
TRIM27-201ENST00000377194 H2AFXP16104 143 aaPredicted RBP19.7■□□□□ 0.74
TRIM27-201ENST00000377194 CCDC82Q8N4S0 544 aa19.7■□□□□ 0.74
TRIM27-201ENST00000377194 ZNF384Q8TF68 577 aa19.7■□□□□ 0.74
TRIM27-201ENST00000377194 ANO10Q9NW15 660 aa19.7■□□□□ 0.74
TRIM27-201ENST00000377194 KLRK1P26718 216 aa19.7■□□□□ 0.74
TRIM27-201ENST00000377194 PPARAQ07869 468 aa19.7■□□□□ 0.74
TRIM27-201ENST00000377194 ARHGAP29Q52LW3 1261 aa19.7■□□□□ 0.74
TRIM27-201ENST00000377194 SYT10Q6XYQ8 523 aa19.7■□□□□ 0.74
TRIM27-201ENST00000377194 CCDC24Q8N4L8 307 aa19.7■□□□□ 0.74
TRIM27-201ENST00000377194 FAM84BQ96KN1 310 aaPredicted RBP19.7■□□□□ 0.74
TRIM27-201ENST00000377194 KIAA1468Q9P260 1216 aa19.7■□□□□ 0.74
TRIM27-201ENST00000377194 BCORQ6W2J9 1755 aa19.7■□□□□ 0.74
TRIM27-201ENST00000377194 MINDY4BA8MYZ0 360 aa19.69■□□□□ 0.74
TRIM27-201ENST00000377194 PFKFB1P16118 471 aa19.69■□□□□ 0.74
TRIM27-201ENST00000377194 UBE4AQ14139 1066 aa19.69■□□□□ 0.74
TRIM27-201ENST00000377194 PTPAQ15257 358 aa19.69■□□□□ 0.74
TRIM27-201ENST00000377194 RGS22Q8NE09 1264 aa19.69■□□□□ 0.74
TRIM27-201ENST00000377194 MAP3K14Q99558 947 aa19.69■□□□□ 0.74
TRIM27-201ENST00000377194 CMA1P23946 247 aa19.69■□□□□ 0.74
TRIM27-201ENST00000377194 RIOK1Q9BRS2 568 aaKnown RBP19.69■□□□□ 0.74
TRIM27-201ENST00000377194 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.69■□□□□ 0.74
TRIM27-201ENST00000377194 SRP68Q9UHB9 627 aaKnown RBP19.69■□□□□ 0.74
TRIM27-201ENST00000377194 TIAM2Q8IVF5 1701 aa19.69■□□□□ 0.74
TRIM27-201ENST00000377194 IFNAR1P17181 557 aa19.69■□□□□ 0.74
TRIM27-201ENST00000377194 SSRP1Q08945 709 aaKnown RBP19.69■□□□□ 0.74
TRIM27-201ENST00000377194 DPCR1Q3MIW9 517 aa19.69■□□□□ 0.74
TRIM27-201ENST00000377194 MAGEB6P1A0A0J9YX57 407 aa19.68■□□□□ 0.74
TRIM27-201ENST00000377194 FMNL1O95466 1100 aaPredicted RBP19.68■□□□□ 0.74
TRIM27-201ENST00000377194 DYNLL1P63167 89 aaKnown RBP19.68■□□□□ 0.74
TRIM27-201ENST00000377194 GNL2Q13823 731 aaKnown RBP19.68■□□□□ 0.74
TRIM27-201ENST00000377194 WTAPQ15007 396 aa19.68■□□□□ 0.74
TRIM27-201ENST00000377194 CYP2D7A0A087X1C5 515 aa19.68■□□□□ 0.74
TRIM27-201ENST00000377194 ST5P78524 1137 aa19.68■□□□□ 0.74
TRIM27-201ENST00000377194 AOPEPQ8N6M6 819 aa19.68■□□□□ 0.74
TRIM27-201ENST00000377194 ECM29Q5VYK3 1845 aa19.67■□□□□ 0.74
TRIM27-201ENST00000377194 SEC31AO94979 1220 aaKnown RBP19.67■□□□□ 0.74
TRIM27-201ENST00000377194 SHC4Q6S5L8 630 aa19.67■□□□□ 0.74
TRIM27-201ENST00000377194 AMIGO3Q86WK7 504 aa19.67■□□□□ 0.74
TRIM27-201ENST00000377194 C8orf37Q96NL8 207 aa19.67■□□□□ 0.74
TRIM27-201ENST00000377194 CLIC6Q96NY7 704 aa19.67■□□□□ 0.74
TRIM27-201ENST00000377194 GNL3LQ9NVN8 582 aaKnown RBP19.67■□□□□ 0.74
TRIM27-201ENST00000377194 BTBD18B2RXH4 712 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms