RNA–Protein interactions for RNA: ENST00000377135.8

IRF3-202, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,442 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-202ENST00000377135 PALD1Q9ULE6 856 aa21.71■■□□□ 1.07
IRF3-202ENST00000377135 CAP1Q01518 475 aa21.7■■□□□ 1.06
IRF3-202ENST00000377135 KIF22Q14807 665 aa21.7■■□□□ 1.06
IRF3-202ENST00000377135 TMED8Q6PL24 325 aaPredicted RBP21.7■■□□□ 1.06
IRF3-202ENST00000377135 C17orf99Q6UX52 265 aa21.7■■□□□ 1.06
IRF3-202ENST00000377135 CPA4Q9UI42 421 aa21.7■■□□□ 1.06
IRF3-202ENST00000377135 A0A0G2JLL6 359 aaPredicted RBP21.69■■□□□ 1.06
IRF3-202ENST00000377135 TRIM75PA6NK02 468 aa21.69■■□□□ 1.06
IRF3-202ENST00000377135 CAP2P40123 477 aa21.69■■□□□ 1.06
IRF3-202ENST00000377135 GADL1Q6ZQY3 521 aa21.69■■□□□ 1.06
IRF3-202ENST00000377135 PRRT2Q7Z6L0 340 aaPredicted RBP21.69■■□□□ 1.06
IRF3-202ENST00000377135 CERS3Q8IU89 383 aa21.69■■□□□ 1.06
IRF3-202ENST00000377135 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.69■■□□□ 1.06
IRF3-202ENST00000377135 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.69■■□□□ 1.06
IRF3-202ENST00000377135 SAP30BPQ9UHR5 308 aaKnown RBP21.69■■□□□ 1.06
IRF3-202ENST00000377135 COL2A1P02458 1487 aaPredicted RBP21.69■■□□□ 1.06
IRF3-202ENST00000377135 RRP1BQ14684 758 aaKnown RBP21.68■■□□□ 1.06
IRF3-202ENST00000377135 CCDC84Q86UT8 332 aaPredicted RBP21.68■■□□□ 1.06
IRF3-202ENST00000377135 DNAJC2Q99543 621 aaKnown RBP21.68■■□□□ 1.06
IRF3-202ENST00000377135 TRIM34Q9BYJ4 488 aa21.68■■□□□ 1.06
IRF3-202ENST00000377135 FLT1P17948 1338 aa21.68■■□□□ 1.06
IRF3-202ENST00000377135 GOLIM4O00461 696 aa21.67■■□□□ 1.06
IRF3-202ENST00000377135 USP5P45974 858 aa21.67■■□□□ 1.06
IRF3-202ENST00000377135 LACTBP83111 547 aaPredicted RBP21.67■■□□□ 1.06
IRF3-202ENST00000377135 SPP2Q13103 211 aa21.67■■□□□ 1.06
IRF3-202ENST00000377135 SLC9C2Q5TAH2 1124 aa21.67■■□□□ 1.06
IRF3-202ENST00000377135 CRACR2BQ8N4Y2 399 aaPredicted RBP21.67■■□□□ 1.06
IRF3-202ENST00000377135 LRRCC1Q9C099 1032 aa21.67■■□□□ 1.06
IRF3-202ENST00000377135 DOCK2Q92608 1830 aa21.67■■□□□ 1.06
IRF3-202ENST00000377135 ECM2O94769 699 aaPredicted RBP21.66■■□□□ 1.06
IRF3-202ENST00000377135 CYP2C8P10632 490 aa21.66■■□□□ 1.06
IRF3-202ENST00000377135 BOLA2Q9H3K6 86 aa21.66■■□□□ 1.06
IRF3-202ENST00000377135 MYO5AQ9Y4I1 1855 aaKnown RBP21.65■■□□□ 1.06
IRF3-202ENST00000377135 USP17L5A8MUK1 530 aa21.65■■□□□ 1.06
IRF3-202ENST00000377135 HLA-DOAP06340 250 aa21.65■■□□□ 1.06
IRF3-202ENST00000377135 ATP5JP18859 108 aa21.65■■□□□ 1.06
IRF3-202ENST00000377135 METTL16Q86W50 562 aaKnown RBP21.65■■□□□ 1.06
IRF3-202ENST00000377135 ZNF280CQ8ND82 737 aa21.65■■□□□ 1.06
IRF3-202ENST00000377135 PARK7Q99497 189 aaKnown RBP21.65■■□□□ 1.06
IRF3-202ENST00000377135 ARHGAP39Q9C0H5 1083 aa21.65■■□□□ 1.06
IRF3-202ENST00000377135 MAGEB6P1A0A0J9YX57 407 aa21.64■■□□□ 1.06
IRF3-202ENST00000377135 SMARCA5O60264 1052 aaPredicted RBP21.64■■□□□ 1.06
IRF3-202ENST00000377135 GNRH1P01148 92 aa21.63■■□□□ 1.05
IRF3-202ENST00000377135 PDE6AP16499 860 aa21.63■■□□□ 1.05
IRF3-202ENST00000377135 SLC4A8Q2Y0W8 1093 aa21.63■■□□□ 1.05
IRF3-202ENST00000377135 EDC3Q96F86 508 aaKnown RBP21.63■■□□□ 1.05
IRF3-202ENST00000377135 TBC1D2Q9BYX2 928 aa21.63■■□□□ 1.05
IRF3-202ENST00000377135 DCTPP1Q9H773 170 aa21.63■■□□□ 1.05
IRF3-202ENST00000377135 SLC45A1Q9Y2W3 748 aa21.63■■□□□ 1.05
IRF3-202ENST00000377135 ASNSP08243 561 aa21.63■■□□□ 1.05
IRF3-202ENST00000377135 PSMC4P43686 418 aa21.63■■□□□ 1.05
IRF3-202ENST00000377135 RIOK1Q9BRS2 568 aaKnown RBP21.63■■□□□ 1.05
IRF3-202ENST00000377135 AS3MTQ9HBK9 375 aa21.63■■□□□ 1.05
IRF3-202ENST00000377135 PAG1Q9NWQ8 432 aa21.63■■□□□ 1.05
IRF3-202ENST00000377135 ZNF532Q9HCE3 1301 aa21.62■■□□□ 1.05
IRF3-202ENST00000377135 FMNL1O95466 1100 aaPredicted RBP21.62■■□□□ 1.05
IRF3-202ENST00000377135 NBPF11Q86T75 865 aa21.62■■□□□ 1.05
IRF3-202ENST00000377135 TTC6Q86TZ1 520 aa21.62■■□□□ 1.05
IRF3-202ENST00000377135 YTHDC1Q96MU7 727 aaKnown RBP21.62■■□□□ 1.05
IRF3-202ENST00000377135 DNAJC18Q9H819 358 aa21.62■■□□□ 1.05
IRF3-202ENST00000377135 PTCH2Q9Y6C5 1203 aa21.62■■□□□ 1.05
IRF3-202ENST00000377135 ADGRA2Q96PE1 1338 aa21.61■■□□□ 1.05
IRF3-202ENST00000377135 HOXD10P28358 340 aa21.61■■□□□ 1.05
IRF3-202ENST00000377135 JAG1P78504 1218 aa21.61■■□□□ 1.05
IRF3-202ENST00000377135 HAUS7Q99871 368 aa21.61■■□□□ 1.05
IRF3-202ENST00000377135 WDR18Q9BV38 432 aa21.61■■□□□ 1.05
IRF3-202ENST00000377135 AGTPBP1Q9UPW5 1226 aa21.61■■□□□ 1.05
IRF3-202ENST00000377135 BCRP11274 1271 aa21.6■■□□□ 1.05
IRF3-202ENST00000377135 HMGCS2P54868 508 aa21.6■■□□□ 1.05
IRF3-202ENST00000377135 PRMT2P55345 433 aa21.6■■□□□ 1.05
IRF3-202ENST00000377135 TREML2Q5T2D2 321 aa21.6■■□□□ 1.05
IRF3-202ENST00000377135 PROCA1Q8NCQ7 364 aaPredicted RBP21.6■■□□□ 1.05
IRF3-202ENST00000377135 SMCR8Q8TEV9 937 aaPredicted RBP21.6■■□□□ 1.05
IRF3-202ENST00000377135 ARMC5Q96C12 935 aa21.6■■□□□ 1.05
IRF3-202ENST00000377135 TRIM47Q96LD4 638 aa21.6■■□□□ 1.05
IRF3-202ENST00000377135 CRNKL1Q9BZJ0 848 aaKnown RBP21.6■■□□□ 1.05
IRF3-202ENST00000377135 GINM1Q9NU53 330 aa21.6■■□□□ 1.05
IRF3-202ENST00000377135 TCRBV5S4A2TA0A5A2 114 aa21.59■■□□□ 1.05
IRF3-202ENST00000377135 GDF11O95390 407 aa21.59■■□□□ 1.05
IRF3-202ENST00000377135 CTGFP29279 349 aa21.59■■□□□ 1.05
IRF3-202ENST00000377135 SLC9C1Q4G0N8 1177 aa21.59■■□□□ 1.05
IRF3-202ENST00000377135 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.59■■□□□ 1.052e-6■■■■□ 21.1
IRF3-202ENST00000377135 SERPINB13Q9UIV8 391 aa21.59■■□□□ 1.05
IRF3-202ENST00000377135 MAST2Q6P0Q8 1798 aa21.59■■□□□ 1.05
IRF3-202ENST00000377135 POLR3DP05423 398 aaPredicted RBP21.58■■□□□ 1.05
IRF3-202ENST00000377135 SH3D19Q5HYK7 790 aa21.58■■□□□ 1.05
IRF3-202ENST00000377135 PCDHB15Q9Y5E8 787 aa21.58■■□□□ 1.05
IRF3-202ENST00000377135 DOCK1Q14185 1865 aa21.57■■□□□ 1.04
IRF3-202ENST00000377135 PLCD1P51178 756 aa21.57■■□□□ 1.04
IRF3-202ENST00000377135 RRP1P56182 461 aaKnown RBP21.57■■□□□ 1.04
IRF3-202ENST00000377135 BACE1P56817 501 aa21.57■■□□□ 1.04
IRF3-202ENST00000377135 PABPC4Q13310 644 aaKnown RBP eCLIP21.57■■□□□ 1.046e-8■■■■□ 22.6
IRF3-202ENST00000377135 SHROOM1Q2M3G4 852 aaPredicted RBP21.57■■□□□ 1.04
IRF3-202ENST00000377135 TATDN1Q6P1N9 297 aa21.57■■□□□ 1.04
IRF3-202ENST00000377135 EHD4Q9H223 541 aa21.57■■□□□ 1.04
IRF3-202ENST00000377135 ECHDC1Q9NTX5 307 aa21.57■■□□□ 1.04
IRF3-202ENST00000377135 SRRDQ9UH36 339 aa21.57■■□□□ 1.04
IRF3-202ENST00000377135 PNMA3Q9UL41 463 aa21.57■■□□□ 1.04
IRF3-202ENST00000377135 ZBTB21Q9ULJ3 1066 aa21.57■■□□□ 1.04
IRF3-202ENST00000377135 C19orf81C9J6K1 198 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms