RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 FBXO2Q9UK22 296 aaPredicted RBP15.18■□□□□ 0.02
ACTN1-202ENST00000376839 VWA3AA6NCI4 1184 aa15.18■□□□□ 0.02
ACTN1-202ENST00000376839 URI1O94763 535 aaPredicted RBP15.18■□□□□ 0.02
ACTN1-202ENST00000376839 IFNAR1P17181 557 aa15.18■□□□□ 0.02
ACTN1-202ENST00000376839 TEX13AQ9BXU3 409 aaPredicted RBP15.18■□□□□ 0.02
ACTN1-202ENST00000376839 POLR2DO15514 142 aaKnown RBP15.17■□□□□ 0.02
ACTN1-202ENST00000376839 UQCRFS1P1P0C7P4 283 aa15.17■□□□□ 0.02
ACTN1-202ENST00000376839 NR5A1Q13285 461 aa15.17■□□□□ 0.02
ACTN1-202ENST00000376839 RASGRF1Q13972 1273 aa15.17■□□□□ 0.02
ACTN1-202ENST00000376839 POSTNQ15063 836 aa15.17■□□□□ 0.02
ACTN1-202ENST00000376839 SPATA5Q8NB90 893 aa15.17■□□□□ 0.02
ACTN1-202ENST00000376839 SLC4A9Q96Q91 983 aa15.17■□□□□ 0.02
ACTN1-202ENST00000376839 SERTAD1Q9UHV2 236 aa15.17■□□□□ 0.02
ACTN1-202ENST00000376839 FHOD1Q9Y613 1164 aa15.17■□□□□ 0.02
ACTN1-202ENST00000376839 PARP3Q9Y6F1 533 aa15.17■□□□□ 0.02
ACTN1-202ENST00000376839 MYH3P11055 1940 aa15.17■□□□□ 0.02
ACTN1-202ENST00000376839 GSG1L2A8MUP6 293 aa15.17■□□□□ 0.02
ACTN1-202ENST00000376839 FGFR2P21802 821 aa15.17■□□□□ 0.02
ACTN1-202ENST00000376839 TBX2Q13207 712 aaPredicted RBP15.17■□□□□ 0.02
ACTN1-202ENST00000376839 PUM3Q15397 648 aaKnown RBP15.17■□□□□ 0.02
ACTN1-202ENST00000376839 AKNAD1Q5T1N1 836 aa15.17■□□□□ 0.02
ACTN1-202ENST00000376839 LPIN2Q92539 896 aa15.17■□□□□ 0.02
ACTN1-202ENST00000376839 ZBTB1Q9Y2K1 713 aa15.17■□□□□ 0.02
ACTN1-202ENST00000376839 PPP2R2CQ9Y2T4 447 aa15.17■□□□□ 0.02
ACTN1-202ENST00000376839 NFE2L3Q9Y4A8 694 aa15.17■□□□□ 0.02
ACTN1-202ENST00000376839 PCDHB6Q9Y5E3 794 aa15.17■□□□□ 0.02
ACTN1-202ENST00000376839 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.17■□□□□ 0.02
ACTN1-202ENST00000376839 PTPREP23469 700 aa15.16■□□□□ 0.02
ACTN1-202ENST00000376839 PDILTQ8N807 584 aa15.16■□□□□ 0.02
ACTN1-202ENST00000376839 MED15Q96RN5 788 aa15.16■□□□□ 0.02
ACTN1-202ENST00000376839 CARD6Q9BX69 1037 aa15.16■□□□□ 0.02
ACTN1-202ENST00000376839 SEC31BQ9NQW1 1179 aa15.16■□□□□ 0.02
ACTN1-202ENST00000376839 TOMM22Q9NS69 142 aa15.16■□□□□ 0.02
ACTN1-202ENST00000376839 ARHGAP6O43182 974 aa15.16■□□□□ 0.02
ACTN1-202ENST00000376839 PDE8AO60658 829 aa15.16■□□□□ 0.02
ACTN1-202ENST00000376839 ATP2B1P20020 1258 aa15.16■□□□□ 0.02
ACTN1-202ENST00000376839 EVA1CP58658 441 aa15.16■□□□□ 0.02
ACTN1-202ENST00000376839 RTN1Q16799 776 aa15.16■□□□□ 0.02
ACTN1-202ENST00000376839 USP49Q70CQ1 688 aa15.16■□□□□ 0.02
ACTN1-202ENST00000376839 OXER1Q8TDS5 423 aa15.16■□□□□ 0.02
ACTN1-202ENST00000376839 CHD4Q14839 1912 aa15.16■□□□□ 0.02
ACTN1-202ENST00000376839 MYO1BO43795 1136 aa15.16■□□□□ 0.02
ACTN1-202ENST00000376839 TADA3O75528 432 aa15.16■□□□□ 0.02
ACTN1-202ENST00000376839 ZNF18P17022 549 aa15.16■□□□□ 0.02
ACTN1-202ENST00000376839 ADKP55263 362 aaKnown RBP15.16■□□□□ 0.02
ACTN1-202ENST00000376839 TOGARAM2Q6ZUX3 1019 aa15.16■□□□□ 0.02
ACTN1-202ENST00000376839 LCORLQ8N3X6 602 aa15.16■□□□□ 0.02
ACTN1-202ENST00000376839 UBXN4Q92575 508 aa15.16■□□□□ 0.02
ACTN1-202ENST00000376839 SAFBQ15424 915 aaKnown RBP eCLIP15.15■□□□□ 0.02
ACTN1-202ENST00000376839 MFSD6Q6ZSS7 791 aa15.15■□□□□ 0.02
ACTN1-202ENST00000376839 FCHSD1Q86WN1 690 aa15.15■□□□□ 0.02
ACTN1-202ENST00000376839 TC2NQ8N9U0 490 aa15.15■□□□□ 0.02
ACTN1-202ENST00000376839 MNS1Q8NEH6 495 aa15.15■□□□□ 0.02
ACTN1-202ENST00000376839 WDR24Q96S15 920 aa15.15■□□□□ 0.02
ACTN1-202ENST00000376839 BAG1Q99933 345 aaPredicted RBP15.15■□□□□ 0.02
ACTN1-202ENST00000376839 CYP19A1P11511 503 aaPredicted RBP15.15■□□□□ 0.02
ACTN1-202ENST00000376839 SARSP49591 514 aaKnown RBP15.15■□□□□ 0.02
ACTN1-202ENST00000376839 MAP3K12Q12852 859 aa15.15■□□□□ 0.02
ACTN1-202ENST00000376839 BMS1Q14692 1282 aaKnown RBP15.15■□□□□ 0.02
ACTN1-202ENST00000376839 WASF1Q92558 559 aa15.15■□□□□ 0.02
ACTN1-202ENST00000376839 EPC1Q9H2F5 836 aa15.15■□□□□ 0.02
ACTN1-202ENST00000376839 CNNM2Q9H8M5 875 aa15.15■□□□□ 0.02
ACTN1-202ENST00000376839 ZSCAN12O43309 604 aa15.14■□□□□ 0.01
ACTN1-202ENST00000376839 PNMA6AP0CW24 399 aaPredicted RBP15.14■□□□□ 0.01
ACTN1-202ENST00000376839 TDO2P48775 406 aa15.14■□□□□ 0.01
ACTN1-202ENST00000376839 MORC3Q14149 939 aa15.14■□□□□ 0.01
ACTN1-202ENST00000376839 WTAPQ15007 396 aa15.14■□□□□ 0.01
ACTN1-202ENST00000376839 NT5DC1Q5TFE4 455 aa15.14■□□□□ 0.01
ACTN1-202ENST00000376839 ELOA2Q8IYF1 753 aaPredicted RBP15.14■□□□□ 0.01
ACTN1-202ENST00000376839 TRIM22Q8IYM9 498 aa15.14■□□□□ 0.01
ACTN1-202ENST00000376839 SMARCE1Q969G3 411 aa15.14■□□□□ 0.01
ACTN1-202ENST00000376839 SAMSN1Q9NSI8 373 aaKnown RBP15.14■□□□□ 0.01
ACTN1-202ENST00000376839 NID2Q14112 1375 aa15.14■□□□□ 0.01
ACTN1-202ENST00000376839 ACTN4O43707 911 aaKnown RBP15.14■□□□□ 0.01
ACTN1-202ENST00000376839 CDK11BP21127 795 aaKnown RBP15.14■□□□□ 0.01
ACTN1-202ENST00000376839 KRT23Q9C075 422 aa15.14■□□□□ 0.01
ACTN1-202ENST00000376839 FOXP1Q9H334 677 aaPredicted RBP15.14■□□□□ 0.01
ACTN1-202ENST00000376839 HOOK1Q9UJC3 728 aaKnown RBP15.14■□□□□ 0.01
ACTN1-202ENST00000376839 TIAM2Q8IVF5 1701 aa15.14■□□□□ 0.01
ACTN1-202ENST00000376839 RILPL1Q5EBL4 403 aa15.13■□□□□ 0.01
ACTN1-202ENST00000376839 SPECC1LQ69YQ0 1117 aa15.13■□□□□ 0.01
ACTN1-202ENST00000376839 CRACR2BQ8N4Y2 399 aaPredicted RBP15.13■□□□□ 0.01
ACTN1-202ENST00000376839 MLKLQ8NB16 471 aa15.13■□□□□ 0.01
ACTN1-202ENST00000376839 ENOX1Q8TC92 643 aaKnown RBP15.13■□□□□ 0.01
ACTN1-202ENST00000376839 NUP133Q8WUM0 1156 aa15.13■□□□□ 0.01
ACTN1-202ENST00000376839 STAG1Q8WVM7 1258 aa15.13■□□□□ 0.01
ACTN1-202ENST00000376839 SHISA4Q96DD7 197 aa15.13■□□□□ 0.01
ACTN1-202ENST00000376839 SLC4A4Q9Y6R1 1079 aa15.13■□□□□ 0.01
ACTN1-202ENST00000376839 FAM205CA6NFA0 338 aa15.13■□□□□ 0.01
ACTN1-202ENST00000376839 ZRANB2O95218 330 aaKnown RBP eCLIP15.13■□□□□ 0.01
ACTN1-202ENST00000376839 SLC5A1P13866 664 aa15.13■□□□□ 0.01
ACTN1-202ENST00000376839 GNG11P61952 73 aa15.13■□□□□ 0.01
ACTN1-202ENST00000376839 MIGA1Q8NAN2 632 aa15.13■□□□□ 0.01
ACTN1-202ENST00000376839 DESI2Q9BSY9 194 aa15.13■□□□□ 0.01
ACTN1-202ENST00000376839 CSRNP2Q9H175 543 aa15.13■□□□□ 0.01
ACTN1-202ENST00000376839 LRP5O75197 1615 aa15.13■□□□□ 0.01
ACTN1-202ENST00000376839 SLIT2O94813 1529 aa15.13■□□□□ 0.01
ACTN1-202ENST00000376839 ANKRD36CQ5JPF3 1778 aa15.13■□□□□ 0.01
ACTN1-202ENST00000376839 MROH5Q6ZUA9 1318 aa15.13■□□□□ 0.01
ACTN1-202ENST00000376839 SMIM22K7EJ46 135 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms