RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 CERS3Q8IU89 383 aa17.35■□□□□ 0.37
CCHCR1-201ENST00000376266 RASSF4Q9H2L5 321 aa17.35■□□□□ 0.37
CCHCR1-201ENST00000376266 ANO10Q9NW15 660 aa17.35■□□□□ 0.37
CCHCR1-201ENST00000376266 IRS2Q9Y4H2 1338 aa17.35■□□□□ 0.37
CCHCR1-201ENST00000376266 MUM1L1Q5H9M0 696 aa17.35■□□□□ 0.37
CCHCR1-201ENST00000376266 SOGA3Q5TF21 947 aa17.35■□□□□ 0.37
CCHCR1-201ENST00000376266 AOPEPQ8N6M6 819 aa17.35■□□□□ 0.37
CCHCR1-201ENST00000376266 ORC3Q9UBD5 711 aaPredicted RBP17.35■□□□□ 0.37
CCHCR1-201ENST00000376266 CFAP45Q9UL16 551 aa17.35■□□□□ 0.37
CCHCR1-201ENST00000376266 CCDC158Q5M9N0 1113 aa17.34■□□□□ 0.37
CCHCR1-201ENST00000376266 RTFDC1Q9BY42 306 aaPredicted RBP17.34■□□□□ 0.37
CCHCR1-201ENST00000376266 OSBPL5Q9H0X9 879 aaPredicted RBP17.34■□□□□ 0.37
CCHCR1-201ENST00000376266 RSPH14Q9UHP6 348 aa17.34■□□□□ 0.37
CCHCR1-201ENST00000376266 TTC41PQ6P2S7 1318 aa17.34■□□□□ 0.37
CCHCR1-201ENST00000376266 COL9A3Q14050 684 aaPredicted RBP17.34■□□□□ 0.37
CCHCR1-201ENST00000376266 WASHC4Q2M389 1173 aa17.34■□□□□ 0.37
CCHCR1-201ENST00000376266 CAVIN4Q5BKX8 364 aa17.34■□□□□ 0.37
CCHCR1-201ENST00000376266 VPS37DQ86XT2 251 aa17.34■□□□□ 0.37
CCHCR1-201ENST00000376266 CCAR1Q8IX12 1150 aaKnown RBP17.34■□□□□ 0.37
CCHCR1-201ENST00000376266 MNS1Q8NEH6 495 aa17.34■□□□□ 0.37
CCHCR1-201ENST00000376266 SMARCE1Q969G3 411 aa17.34■□□□□ 0.37
CCHCR1-201ENST00000376266 FBXW7Q969H0 707 aa17.34■□□□□ 0.37
CCHCR1-201ENST00000376266 GPATCH3Q96I76 525 aa17.34■□□□□ 0.37
CCHCR1-201ENST00000376266 IMPACTQ9P2X3 320 aa17.34■□□□□ 0.37
CCHCR1-201ENST00000376266 IQSEC3Q9UPP2 1182 aaPredicted RBP17.34■□□□□ 0.37
CCHCR1-201ENST00000376266 H3BQV1 296 aa17.34■□□□□ 0.37
CCHCR1-201ENST00000376266 TTC39AQ5SRH9 613 aa17.34■□□□□ 0.37
CCHCR1-201ENST00000376266 IFFO2Q5TF58 517 aa17.34■□□□□ 0.37
CCHCR1-201ENST00000376266 CEP57L1Q8IYX8 460 aa17.34■□□□□ 0.37
CCHCR1-201ENST00000376266 DDX11Q96FC9 970 aa17.34■□□□□ 0.37
CCHCR1-201ENST00000376266 ZC3H12CQ9C0D7 883 aaKnown RBP17.34■□□□□ 0.37
CCHCR1-201ENST00000376266 NRDCO43847 1150 aa17.33■□□□□ 0.36
CCHCR1-201ENST00000376266 TUBB4AP04350 444 aa17.33■□□□□ 0.36
CCHCR1-201ENST00000376266 HIBADHP31937 336 aaKnown RBP17.33■□□□□ 0.36
CCHCR1-201ENST00000376266 GRIPAP1Q4V328 841 aa17.33■□□□□ 0.36
CCHCR1-201ENST00000376266 BOLA2Q9H3K6 86 aa17.33■□□□□ 0.36
CCHCR1-201ENST00000376266 NDUFB9Q9Y6M9 179 aa17.33■□□□□ 0.36
CCHCR1-201ENST00000376266 SLC27A2O14975 620 aa17.33■□□□□ 0.36
CCHCR1-201ENST00000376266 SEC31AO94979 1220 aaKnown RBP17.33■□□□□ 0.36
CCHCR1-201ENST00000376266 YBX3P16989 372 aaKnown RBP eCLIP17.33■□□□□ 0.36
CCHCR1-201ENST00000376266 RESTQ13127 1097 aa17.33■□□□□ 0.36
CCHCR1-201ENST00000376266 SCARF1Q14162 830 aa17.33■□□□□ 0.36
CCHCR1-201ENST00000376266 FBXO33Q7Z6M2 555 aa17.33■□□□□ 0.36
CCHCR1-201ENST00000376266 NBPF11Q86T75 865 aa17.33■□□□□ 0.36
CCHCR1-201ENST00000376266 EFCC1Q9HA90 598 aa17.33■□□□□ 0.36
CCHCR1-201ENST00000376266 ZCCHC17Q9NP64 241 aaKnown RBP17.33■□□□□ 0.36
CCHCR1-201ENST00000376266 ZNF277Q9NRM2 450 aaPredicted RBP17.33■□□□□ 0.36
CCHCR1-201ENST00000376266 ARAP2Q8WZ64 1704 aa17.32■□□□□ 0.36
CCHCR1-201ENST00000376266 MED23Q9ULK4 1368 aa17.32■□□□□ 0.36
CCHCR1-201ENST00000376266 KINO60870 393 aaKnown RBP17.32■□□□□ 0.36
CCHCR1-201ENST00000376266 SFPQP23246 707 aaKnown RBP eCLIP17.32■□□□□ 0.36
CCHCR1-201ENST00000376266 CCDC73Q6ZRK6 1079 aa17.32■□□□□ 0.36
CCHCR1-201ENST00000376266 C15orf52Q6ZUT6 534 aaKnown RBP17.32■□□□□ 0.36
CCHCR1-201ENST00000376266 CCDC150Q8NCX0 1101 aa17.32■□□□□ 0.36
CCHCR1-201ENST00000376266 BRF1Q92994 677 aa17.32■□□□□ 0.36
CCHCR1-201ENST00000376266 PSMD1Q99460 953 aa17.32■□□□□ 0.36
CCHCR1-201ENST00000376266 NAT10Q9H0A0 1025 aaKnown RBP17.32■□□□□ 0.36
CCHCR1-201ENST00000376266 DNAI1Q9UI46 699 aa17.32■□□□□ 0.36
CCHCR1-201ENST00000376266 NFKBIEO00221 500 aa17.32■□□□□ 0.36
CCHCR1-201ENST00000376266 ATP5JP18859 108 aa17.32■□□□□ 0.36
CCHCR1-201ENST00000376266 OAS2P29728 719 aaKnown RBP17.32■□□□□ 0.36
CCHCR1-201ENST00000376266 FKBP4Q02790 459 aaKnown RBP eCLIP17.32■□□□□ 0.36
CCHCR1-201ENST00000376266 ZSCAN26Q16670 478 aa17.32■□□□□ 0.36
CCHCR1-201ENST00000376266 AOC3Q16853 763 aa17.32■□□□□ 0.36
CCHCR1-201ENST00000376266 PI16Q6UXB8 463 aa17.32■□□□□ 0.36
CCHCR1-201ENST00000376266 TMC6Q7Z403 805 aa17.32■□□□□ 0.36
CCHCR1-201ENST00000376266 C10orf67Q8IYJ2 551 aa17.32■□□□□ 0.36
CCHCR1-201ENST00000376266 DOK7Q18PE1 504 aa17.31■□□□□ 0.36
CCHCR1-201ENST00000376266 MAP4K1Q92918 833 aa17.31■□□□□ 0.36
CCHCR1-201ENST00000376266 EYA3Q99504 573 aa17.31■□□□□ 0.36
CCHCR1-201ENST00000376266 SNRKQ9NRH2 765 aa17.31■□□□□ 0.36
CCHCR1-201ENST00000376266 ATP8B1O43520 1251 aa17.31■□□□□ 0.36
CCHCR1-201ENST00000376266 JAK2O60674 1132 aa17.31■□□□□ 0.36
CCHCR1-201ENST00000376266 SMC2O95347 1197 aa17.31■□□□□ 0.36
CCHCR1-201ENST00000376266 RPS6KB1P23443 525 aa17.31■□□□□ 0.36
CCHCR1-201ENST00000376266 MCAMP43121 646 aa17.31■□□□□ 0.36
CCHCR1-201ENST00000376266 TOB2Q14106 344 aaPredicted RBP17.31■□□□□ 0.36
CCHCR1-201ENST00000376266 ARMCX5Q6P1M9 558 aa17.31■□□□□ 0.36
CCHCR1-201ENST00000376266 SUPT20HQ8NEM7 779 aa17.31■□□□□ 0.36
CCHCR1-201ENST00000376266 TAOK3Q9H2K8 898 aa17.31■□□□□ 0.36
CCHCR1-201ENST00000376266 ZSCAN16Q9H4T2 348 aaPredicted RBP17.31■□□□□ 0.36
CCHCR1-201ENST00000376266 CWC15Q9P013 229 aaKnown RBP17.31■□□□□ 0.36
CCHCR1-201ENST00000376266 ARFGEF1Q9Y6D6 1849 aa17.3■□□□□ 0.36
CCHCR1-201ENST00000376266 ETF1P62495 437 aaKnown RBP17.3■□□□□ 0.36
CCHCR1-201ENST00000376266 ZNF804AQ7Z570 1209 aa17.3■□□□□ 0.36
CCHCR1-201ENST00000376266 PPIP5K2O43314 1243 aa17.3■□□□□ 0.36
CCHCR1-201ENST00000376266 TPM1P09493 284 aa17.3■□□□□ 0.36
CCHCR1-201ENST00000376266 ARID4AP29374 1257 aaPredicted RBP17.3■□□□□ 0.36
CCHCR1-201ENST00000376266 RASSF7Q02833 373 aa17.3■□□□□ 0.36
CCHCR1-201ENST00000376266 RASGRF1Q13972 1273 aa17.3■□□□□ 0.36
CCHCR1-201ENST00000376266 ARHGAP27Q6ZUM4 889 aa17.3■□□□□ 0.36
CCHCR1-201ENST00000376266 EVI5LQ96CN4 794 aa17.3■□□□□ 0.36
CCHCR1-201ENST00000376266 GOLPH3LQ9H4A5 285 aa17.3■□□□□ 0.36
CCHCR1-201ENST00000376266 MYO1CO00159 1063 aa17.29■□□□□ 0.36
CCHCR1-201ENST00000376266 URI1O94763 535 aaPredicted RBP17.29■□□□□ 0.36
CCHCR1-201ENST00000376266 ERCC4Q92889 916 aaPredicted RBP17.29■□□□□ 0.36
CCHCR1-201ENST00000376266 EDC3Q96F86 508 aaKnown RBP17.29■□□□□ 0.36
CCHCR1-201ENST00000376266 ZFP91Q96JP5 570 aaPredicted RBP17.29■□□□□ 0.36
CCHCR1-201ENST00000376266 FAM227BQ96M60 508 aa17.29■□□□□ 0.36
CCHCR1-201ENST00000376266 DBNDD1Q9H9R9 158 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms