RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 EDC4Q6P2E9 1401 aaKnown RBP10.4□□□□□ -0.74
UBR4-201ENST00000375218 TMEM110-MUSTN1A8MSY1 372 aa10.4□□□□□ -0.74
UBR4-201ENST00000375218 RBL2Q08999 1139 aa10.4□□□□□ -0.74
UBR4-201ENST00000375218 VPS72Q15906 364 aa10.4□□□□□ -0.74
UBR4-201ENST00000375218 BHMTQ93088 406 aa10.4□□□□□ -0.74
UBR4-201ENST00000375218 NACA2Q9H009 215 aa10.4□□□□□ -0.74
UBR4-201ENST00000375218 CDK12Q9NYV4 1490 aaPredicted RBP10.4□□□□□ -0.75
UBR4-201ENST00000375218 AKR1B10O60218 316 aa10.4□□□□□ -0.75
UBR4-201ENST00000375218 PRMT3O60678 531 aa10.4□□□□□ -0.75
UBR4-201ENST00000375218 PPFIA2O75334 1257 aa10.4□□□□□ -0.75
UBR4-201ENST00000375218 TIPRLO75663 272 aa10.4□□□□□ -0.75
UBR4-201ENST00000375218 CFAP161Q6P656 301 aa10.4□□□□□ -0.75
UBR4-201ENST00000375218 DCLK2Q8N568 766 aa10.4□□□□□ -0.75
UBR4-201ENST00000375218 ZNHIT6Q9NWK9 470 aaKnown RBP10.4□□□□□ -0.75
UBR4-201ENST00000375218 STAG3Q9UJ98 1225 aa10.4□□□□□ -0.75
UBR4-201ENST00000375218 CDC45O75419 566 aa10.39□□□□□ -0.75
UBR4-201ENST00000375218 NCAM1P13591 858 aa10.39□□□□□ -0.75
UBR4-201ENST00000375218 RAB27AP51159 221 aa10.39□□□□□ -0.75
UBR4-201ENST00000375218 MRPL58Q14197 206 aaKnown RBP10.39□□□□□ -0.75
UBR4-201ENST00000375218 ALFQ53S48 1182 aa10.39□□□□□ -0.75
UBR4-201ENST00000375218 CNNM2Q9H8M5 875 aa10.39□□□□□ -0.75
UBR4-201ENST00000375218 PAXBP1Q9Y5B6 917 aa10.39□□□□□ -0.75
UBR4-201ENST00000375218 PIK3R4Q99570 1358 aa10.39□□□□□ -0.75
UBR4-201ENST00000375218 KRT38O76015 456 aa10.39□□□□□ -0.75
UBR4-201ENST00000375218 GSE1Q14687 1217 aa10.39□□□□□ -0.75
UBR4-201ENST00000375218 MCF2L2Q86YR7 1114 aa10.39□□□□□ -0.75
UBR4-201ENST00000375218 GSDMBQ8TAX9 411 aa10.39□□□□□ -0.75
UBR4-201ENST00000375218 FRMD6Q96NE9 622 aa10.39□□□□□ -0.75
UBR4-201ENST00000375218 RPAP3Q9H6T3 665 aaPredicted RBP10.39□□□□□ -0.75
UBR4-201ENST00000375218 SUFUQ9UMX1 484 aa10.39□□□□□ -0.75
UBR4-201ENST00000375218 KNSTRNQ9Y448 316 aa10.39□□□□□ -0.75
UBR4-201ENST00000375218 EMILIN1Q9Y6C2 1016 aa10.39□□□□□ -0.75
UBR4-201ENST00000375218 WNK3Q9BYP7 1800 aa10.39□□□□□ -0.75
UBR4-201ENST00000375218 MSL3P1P0C860 447 aa10.39□□□□□ -0.75
UBR4-201ENST00000375218 MTHFSP49914 203 aa10.39□□□□□ -0.75
UBR4-201ENST00000375218 RCAN1P53805 252 aa10.39□□□□□ -0.75
UBR4-201ENST00000375218 RNF34Q969K3 372 aa10.39□□□□□ -0.75
UBR4-201ENST00000375218 XPO7Q9UIA9 1087 aaKnown RBP10.39□□□□□ -0.75
UBR4-201ENST00000375218 MKL2Q9ULH7 1088 aa10.39□□□□□ -0.75
UBR4-201ENST00000375218 MAFBQ9Y5Q3 323 aaPredicted RBP10.39□□□□□ -0.75
UBR4-201ENST00000375218 UBA7P41226 1012 aa10.38□□□□□ -0.75
UBR4-201ENST00000375218 C11orf74Q86VG3 221 aa10.38□□□□□ -0.75
UBR4-201ENST00000375218 PARD3BQ8TEW8 1205 aa10.38□□□□□ -0.75
UBR4-201ENST00000375218 hCG_1642624A0A1W2PR95 340 aa10.38□□□□□ -0.75
UBR4-201ENST00000375218 STT3AP46977 705 aa10.38□□□□□ -0.75
UBR4-201ENST00000375218 TBC1D9Q6ZT07 1266 aa10.38□□□□□ -0.75
UBR4-201ENST00000375218 GIMAP8Q8ND71 665 aaPredicted RBP10.38□□□□□ -0.75
UBR4-201ENST00000375218 GBP4Q96PP9 640 aa10.38□□□□□ -0.75
UBR4-201ENST00000375218 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.38□□□□□ -0.757e-9■■□□□ 13.5
UBR4-201ENST00000375218 CHMP5Q9NZZ3 219 aa10.38□□□□□ -0.75
UBR4-201ENST00000375218 SPTLC2O15270 562 aa10.38□□□□□ -0.75
UBR4-201ENST00000375218 FANCFQ9NPI8 374 aa10.38□□□□□ -0.75
UBR4-201ENST00000375218 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.38□□□□□ -0.75
UBR4-201ENST00000375218 DAAM2Q86T65 1068 aa10.37□□□□□ -0.75
UBR4-201ENST00000375218 GTF3C4Q9UKN8 822 aa10.37□□□□□ -0.75
UBR4-201ENST00000375218 FGFR1OPO95684 399 aaKnown RBP10.37□□□□□ -0.75
UBR4-201ENST00000375218 IDEP14735 1019 aa10.37□□□□□ -0.75
UBR4-201ENST00000375218 MYLK4Q86YV6 388 aaPredicted RBP10.37□□□□□ -0.75
UBR4-201ENST00000375218 UROC1Q96N76 676 aa10.37□□□□□ -0.75
UBR4-201ENST00000375218 RRAGDQ9NQL2 400 aaPredicted RBP10.37□□□□□ -0.75
UBR4-201ENST00000375218 FAM50BQ9Y247 325 aa10.37□□□□□ -0.75
UBR4-201ENST00000375218 LGR5O75473 907 aa10.37□□□□□ -0.75
UBR4-201ENST00000375218 TCEA3O75764 348 aa10.37□□□□□ -0.75
UBR4-201ENST00000375218 ZSCAN20P17040 1043 aaPredicted RBP10.37□□□□□ -0.75
UBR4-201ENST00000375218 DGKHQ86XP1 1220 aa10.37□□□□□ -0.75
UBR4-201ENST00000375218 NUDT16Q96DE0 195 aaKnown RBP10.37□□□□□ -0.75
UBR4-201ENST00000375218 RGS12O14924 1447 aa10.37□□□□□ -0.75
UBR4-201ENST00000375218 NPHP4O75161 1426 aaPredicted RBP10.37□□□□□ -0.75
UBR4-201ENST00000375218 IL13P35225 146 aa10.36□□□□□ -0.75
UBR4-201ENST00000375218 NOS2P35228 1153 aa10.36□□□□□ -0.75
UBR4-201ENST00000375218 IFNL3Q8IZI9 196 aa10.36□□□□□ -0.75
UBR4-201ENST00000375218 ANKRD24Q8TF21 1146 aa10.36□□□□□ -0.75
UBR4-201ENST00000375218 PKD1L3Q7Z443 1732 aa10.36□□□□□ -0.75
UBR4-201ENST00000375218 FCHSD2O94868 740 aa10.36□□□□□ -0.75
UBR4-201ENST00000375218 PYGBP11216 843 aa10.36□□□□□ -0.75
UBR4-201ENST00000375218 MAGEA8P43361 318 aa10.36□□□□□ -0.75
UBR4-201ENST00000375218 ZSCAN26Q16670 478 aa10.36□□□□□ -0.75
UBR4-201ENST00000375218 SRLQ86TD4 932 aa10.36□□□□□ -0.75
UBR4-201ENST00000375218 DDX17Q92841 729 aaKnown RBP10.36□□□□□ -0.75
UBR4-201ENST00000375218 NEUROD4Q9HD90 331 aa10.36□□□□□ -0.75
UBR4-201ENST00000375218 GTF2A1LQ9UNN4 478 aa10.36□□□□□ -0.75
UBR4-201ENST00000375218 HALP42357 657 aa10.36□□□□□ -0.75
UBR4-201ENST00000375218 TGIF2Q9GZN2 237 aa10.36□□□□□ -0.75
UBR4-201ENST00000375218 RABEP2Q9H5N1 569 aa10.36□□□□□ -0.75
UBR4-201ENST00000375218 TMEM165Q9HC07 324 aa10.36□□□□□ -0.75
UBR4-201ENST00000375218 EXOC1Q9NV70 894 aa10.36□□□□□ -0.75
UBR4-201ENST00000375218 ACEP12821 1306 aa10.36□□□□□ -0.75
UBR4-201ENST00000375218 ADGRL3Q9HAR2 1447 aa10.36□□□□□ -0.75
UBR4-201ENST00000375218 DPYSL4O14531 572 aa10.36□□□□□ -0.75
UBR4-201ENST00000375218 RRP12Q5JTH9 1297 aaKnown RBP10.36□□□□□ -0.75
UBR4-201ENST00000375218 TTC39AQ5SRH9 613 aa10.36□□□□□ -0.75
UBR4-201ENST00000375218 IQCEQ6IPM2 695 aa10.36□□□□□ -0.75
UBR4-201ENST00000375218 C12orf49Q9H741 205 aa10.36□□□□□ -0.75
UBR4-201ENST00000375218 MORC2Q9Y6X9 1032 aaPredicted RBP10.36□□□□□ -0.75
UBR4-201ENST00000375218 CCDC159P0C7I6 412 aa10.35□□□□□ -0.75
UBR4-201ENST00000375218 KRT20P35900 424 aa10.35□□□□□ -0.75
UBR4-201ENST00000375218 CLK2P49760 499 aaKnown RBP10.35□□□□□ -0.75
UBR4-201ENST00000375218 NFE2Q16621 373 aaPredicted RBP10.35□□□□□ -0.75
UBR4-201ENST00000375218 SHQ1Q6PI26 577 aaKnown RBP10.35□□□□□ -0.75
UBR4-201ENST00000375218 DZIP1Q86YF9 867 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms