RNA–Protein interactions for RNA: ENST00000374982.5

HLA-DRA-201, Transcript of major histocompatibility complex, class II, DR alpha, humanhuman

BASIC

Gene HLA-DRA, Length 1,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRA-201ENST00000374982 KHSRPQ92945 711 aaKnown RBP eCLIP12.84□□□□□ -0.35
HLA-DRA-201ENST00000374982 RNF39Q9H2S5 420 aa12.84□□□□□ -0.35
HLA-DRA-201ENST00000374982 MORF4L1Q9UBU8 362 aa12.84□□□□□ -0.35
HLA-DRA-201ENST00000374982 MAST3O60307 1309 aa12.84□□□□□ -0.35
HLA-DRA-201ENST00000374982 CACNA1AO00555 2505 aa12.84□□□□□ -0.35
HLA-DRA-201ENST00000374982 ELL2O00472 640 aaPredicted RBP12.83□□□□□ -0.36
HLA-DRA-201ENST00000374982 GCKRQ14397 625 aa12.83□□□□□ -0.36
HLA-DRA-201ENST00000374982 USP6NLQ92738 828 aa12.83□□□□□ -0.36
HLA-DRA-201ENST00000374982 ZNF594Q96JF6 807 aaPredicted RBP12.83□□□□□ -0.36
HLA-DRA-201ENST00000374982 ASCC2Q9H1I8 757 aaPredicted RBP12.83□□□□□ -0.36
HLA-DRA-201ENST00000374982 TSPYL2Q9H2G4 693 aaPredicted RBP12.83□□□□□ -0.36
HLA-DRA-201ENST00000374982 SPINK5Q9NQ38 1064 aaPredicted RBP12.83□□□□□ -0.36
HLA-DRA-201ENST00000374982 MBIPQ9NS73 344 aa12.83□□□□□ -0.36
HLA-DRA-201ENST00000374982 FAM198AQ9UFP1 575 aa12.83□□□□□ -0.36
HLA-DRA-201ENST00000374982 DDX20Q9UHI6 824 aaKnown RBP12.83□□□□□ -0.36
HLA-DRA-201ENST00000374982 TRIM35Q9UPQ4 493 aa12.83□□□□□ -0.36
HLA-DRA-201ENST00000374982 PEX10O60683 326 aa12.82□□□□□ -0.36
HLA-DRA-201ENST00000374982 PBX2P40425 430 aa12.82□□□□□ -0.36
HLA-DRA-201ENST00000374982 NHLH1Q02575 133 aa12.82□□□□□ -0.36
HLA-DRA-201ENST00000374982 UBE4AQ14139 1066 aa12.82□□□□□ -0.36
HLA-DRA-201ENST00000374982 SNX17Q15036 470 aa12.82□□□□□ -0.36
HLA-DRA-201ENST00000374982 AAK1Q2M2I8 961 aa12.82□□□□□ -0.36
HLA-DRA-201ENST00000374982 GJC2Q5T442 439 aaPredicted RBP12.82□□□□□ -0.36
HLA-DRA-201ENST00000374982 CDC42EP5Q6NZY7 148 aa12.82□□□□□ -0.36
HLA-DRA-201ENST00000374982 ZFPM1Q8IX07 1006 aa12.82□□□□□ -0.36
HLA-DRA-201ENST00000374982 APBA2Q99767 749 aa12.82□□□□□ -0.36
HLA-DRA-201ENST00000374982 CHMP3Q9Y3E7 222 aa12.82□□□□□ -0.36
HLA-DRA-201ENST00000374982 SMIM22K7EJ46 135 aa12.81□□□□□ -0.36
HLA-DRA-201ENST00000374982 SLURP2P0DP57 97 aa12.81□□□□□ -0.36
HLA-DRA-201ENST00000374982 RGS2P41220 211 aa12.81□□□□□ -0.36
HLA-DRA-201ENST00000374982 LDHAL6AQ6ZMR3 332 aa12.81□□□□□ -0.36
HLA-DRA-201ENST00000374982 PBX4Q9BYU1 374 aa12.81□□□□□ -0.36
HLA-DRA-201ENST00000374982 CNNM1Q9NRU3 951 aa12.81□□□□□ -0.36
HLA-DRA-201ENST00000374982 LRRFIP2Q9Y608 721 aaKnown RBP12.81□□□□□ -0.36
HLA-DRA-201ENST00000374982 REV3LO60673 3130 aa12.8□□□□□ -0.36
HLA-DRA-201ENST00000374982 MSCO60682 206 aa12.8□□□□□ -0.36
HLA-DRA-201ENST00000374982 CTNND1O60716 968 aaKnown RBP12.8□□□□□ -0.36
HLA-DRA-201ENST00000374982 FRAT2O75474 233 aaPredicted RBP12.8□□□□□ -0.36
HLA-DRA-201ENST00000374982 CNGA1P29973 690 aa12.8□□□□□ -0.36
HLA-DRA-201ENST00000374982 FOXO4P98177 505 aa12.8□□□□□ -0.36
HLA-DRA-201ENST00000374982 PABPC4Q13310 644 aaKnown RBP eCLIP12.8□□□□□ -0.36
HLA-DRA-201ENST00000374982 MORN1Q5T089 497 aa12.8□□□□□ -0.36
HLA-DRA-201ENST00000374982 FBXO33Q7Z6M2 555 aa12.8□□□□□ -0.36
HLA-DRA-201ENST00000374982 VPS37DQ86XT2 251 aa12.8□□□□□ -0.36
HLA-DRA-201ENST00000374982 TXNRD2Q9NNW7 524 aa12.8□□□□□ -0.36
HLA-DRA-201ENST00000374982 XIRP2A4UGR9 3374 aa12.8□□□□□ -0.36
HLA-DRA-201ENST00000374982 KBTBD13C9JR72 458 aa12.79□□□□□ -0.36
HLA-DRA-201ENST00000374982 MAPK4P31152 587 aa12.79□□□□□ -0.36
HLA-DRA-201ENST00000374982 HMGCS2P54868 508 aa12.79□□□□□ -0.36
HLA-DRA-201ENST00000374982 FPGSQ05932 587 aa12.79□□□□□ -0.36
HLA-DRA-201ENST00000374982 NCBP3Q53F19 620 aaKnown RBP12.79□□□□□ -0.36
HLA-DRA-201ENST00000374982 CCDC129Q6ZRS4 1044 aa12.79□□□□□ -0.36
HLA-DRA-201ENST00000374982 MICALL1Q8N3F8 863 aa12.79□□□□□ -0.36
HLA-DRA-201ENST00000374982 FLRT1Q9NZU1 646 aa12.79□□□□□ -0.36
HLA-DRA-201ENST00000374982 SUGT1Q9Y2Z0 365 aa12.79□□□□□ -0.36
HLA-DRA-201ENST00000374982 GRXCR1A8MXD5 290 aa12.78□□□□□ -0.36
HLA-DRA-201ENST00000374982 RAG1P15918 1043 aa12.78□□□□□ -0.36
HLA-DRA-201ENST00000374982 MAP3K10Q02779 954 aa12.78□□□□□ -0.36
HLA-DRA-201ENST00000374982 SPP2Q13103 211 aa12.78□□□□□ -0.36
HLA-DRA-201ENST00000374982 TAF7LQ5H9L4 462 aa12.78□□□□□ -0.36
HLA-DRA-201ENST00000374982 CCDC30Q5VVM6 783 aa12.78□□□□□ -0.36
HLA-DRA-201ENST00000374982 MFSD14CQ5VZR4 134 aa12.78□□□□□ -0.36
HLA-DRA-201ENST00000374982 GPR142Q7Z601 462 aa12.78□□□□□ -0.36
HLA-DRA-201ENST00000374982 GPRC5AQ8NFJ5 357 aa12.78□□□□□ -0.36
HLA-DRA-201ENST00000374982 PORCNQ9H237 461 aa12.78□□□□□ -0.36
HLA-DRA-201ENST00000374982 TACC3Q9Y6A5 838 aa12.78□□□□□ -0.36
HLA-DRA-201ENST00000374982 UTYO14607 1347 aa12.78□□□□□ -0.36
HLA-DRA-201ENST00000374982 CLSPNQ9HAW4 1339 aa12.78□□□□□ -0.36
HLA-DRA-201ENST00000374982 PRR33A8MZF0 331 aa12.77□□□□□ -0.37
HLA-DRA-201ENST00000374982 PI4K2BG5E9Z4 385 aa12.77□□□□□ -0.37
HLA-DRA-201ENST00000374982 ERC2O15083 957 aa12.77□□□□□ -0.37
HLA-DRA-201ENST00000374982 TLE2Q04725 743 aa12.77□□□□□ -0.37
HLA-DRA-201ENST00000374982 C1orf53Q5VUE5 145 aa12.77□□□□□ -0.37
HLA-DRA-201ENST00000374982 SH3BP5LQ7L8J4 393 aa12.77□□□□□ -0.37
HLA-DRA-201ENST00000374982 ARRDC4Q8NCT1 418 aa12.77□□□□□ -0.37
HLA-DRA-201ENST00000374982 MYH16Q9H6N6 1097 aa12.77□□□□□ -0.37
HLA-DRA-201ENST00000374982 KIAA0355O15063 1070 aa12.76□□□□□ -0.37
HLA-DRA-201ENST00000374982 CLTBP09497 229 aa12.76□□□□□ -0.37
HLA-DRA-201ENST00000374982 ADCYAP1R1P41586 468 aa12.76□□□□□ -0.37
HLA-DRA-201ENST00000374982 IRX3P78415 501 aaPredicted RBP12.76□□□□□ -0.37
HLA-DRA-201ENST00000374982 MAP2K5Q13163 448 aa12.76□□□□□ -0.37
HLA-DRA-201ENST00000374982 SKIV2LQ15477 1246 aaKnown RBP12.76□□□□□ -0.37
HLA-DRA-201ENST00000374982 DIXDC1Q155Q3 683 aa12.76□□□□□ -0.37
HLA-DRA-201ENST00000374982 CCDC57Q2TAC2 916 aa12.76□□□□□ -0.37
HLA-DRA-201ENST00000374982 LMBR1LQ6UX01 489 aa12.76□□□□□ -0.37
HLA-DRA-201ENST00000374982 PLEKHH3Q7Z736 793 aa12.76□□□□□ -0.37
HLA-DRA-201ENST00000374982 CCDC146Q8IYE0 955 aa12.76□□□□□ -0.37
HLA-DRA-201ENST00000374982 C8orf58Q8NAV2 365 aa12.76□□□□□ -0.37
HLA-DRA-201ENST00000374982 TRPV1Q8NER1 839 aa12.76□□□□□ -0.37
HLA-DRA-201ENST00000374982 FERMT2Q96AC1 680 aa12.76□□□□□ -0.37
HLA-DRA-201ENST00000374982 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.76□□□□□ -0.37
HLA-DRA-201ENST00000374982 USP40Q9NVE5 1235 aa12.76□□□□□ -0.37
HLA-DRA-201ENST00000374982 MYBBP1AQ9BQG0 1328 aaKnown RBP12.76□□□□□ -0.37
HLA-DRA-201ENST00000374982 MYH2Q9UKX2 1941 aa12.76□□□□□ -0.37
HLA-DRA-201ENST00000374982 DDTLA6NHG4 134 aaPredicted RBP12.75□□□□□ -0.37
HLA-DRA-201ENST00000374982 TLL1O43897 1013 aa12.75□□□□□ -0.37
HLA-DRA-201ENST00000374982 MYCNP04198 464 aaPredicted RBP12.75□□□□□ -0.37
HLA-DRA-201ENST00000374982 ZNF853P0CG23 659 aa12.75□□□□□ -0.37
HLA-DRA-201ENST00000374982 RGS3P49796 1198 aa12.75□□□□□ -0.37
HLA-DRA-201ENST00000374982 Q3C1V9 767 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms