RNA–Protein interactions for RNA: ENST00000374737.8

VSIG4-201, Transcript of V-set and immunoglobulin domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSIG4, Length 1,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4-201ENST00000374737 TOMM70O94826 608 aa10.75□□□□□ -0.69
VSIG4-201ENST00000374737 ITGBL1O95965 494 aaPredicted RBP10.75□□□□□ -0.69
VSIG4-201ENST00000374737 NECTIN1Q15223 517 aa10.75□□□□□ -0.69
VSIG4-201ENST00000374737 CREB3L3Q68CJ9 461 aa10.75□□□□□ -0.69
VSIG4-201ENST00000374737 TRIM34Q9BYJ4 488 aa10.75□□□□□ -0.69
VSIG4-201ENST00000374737 SERPINB13Q9UIV8 391 aa10.75□□□□□ -0.69
VSIG4-201ENST00000374737 PPP2R3BQ9Y5P8 575 aa10.75□□□□□ -0.69
VSIG4-201ENST00000374737 TACC3Q9Y6A5 838 aa10.75□□□□□ -0.69
VSIG4-201ENST00000374737 CDK5RAP2Q96SN8 1893 aa10.75□□□□□ -0.69
VSIG4-201ENST00000374737 SLC27A2O14975 620 aa10.74□□□□□ -0.69
VSIG4-201ENST00000374737 SUPT20HL1Q3ZLR7 823 aa10.74□□□□□ -0.69
VSIG4-201ENST00000374737 MOB2Q70IA6 237 aa10.74□□□□□ -0.69
VSIG4-201ENST00000374737 FOXP4Q8IVH2 680 aaPredicted RBP10.74□□□□□ -0.69
VSIG4-201ENST00000374737 NBPF3Q9H094 633 aa10.74□□□□□ -0.69
VSIG4-201ENST00000374737 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.74□□□□□ -0.69
VSIG4-201ENST00000374737 TOMM22Q9NS69 142 aa10.74□□□□□ -0.69
VSIG4-201ENST00000374737 ATRNL1Q5VV63 1379 aa10.74□□□□□ -0.69
VSIG4-201ENST00000374737 CDK8P49336 464 aa10.74□□□□□ -0.69
VSIG4-201ENST00000374737 TTLL12Q14166 644 aaPredicted RBP10.74□□□□□ -0.69
VSIG4-201ENST00000374737 RRP12Q5JTH9 1297 aaKnown RBP10.74□□□□□ -0.69
VSIG4-201ENST00000374737 TBC1D10CQ8IV04 446 aa10.74□□□□□ -0.69
VSIG4-201ENST00000374737 RASEFQ8IZ41 740 aa10.74□□□□□ -0.69
VSIG4-201ENST00000374737 SMC1BQ8NDV3 1235 aa10.74□□□□□ -0.69
VSIG4-201ENST00000374737 DNAJC18Q9H819 358 aa10.74□□□□□ -0.69
VSIG4-201ENST00000374737 MKNK2Q9HBH9 465 aa10.74□□□□□ -0.69
VSIG4-201ENST00000374737 CELF2O95319 508 aaKnown RBP10.73□□□□□ -0.69
VSIG4-201ENST00000374737 HSPA4P34932 840 aa10.73□□□□□ -0.69
VSIG4-201ENST00000374737 NKX2-3Q8TAU0 364 aa10.73□□□□□ -0.69
VSIG4-201ENST00000374737 MYH1P12882 1939 aa10.73□□□□□ -0.69
VSIG4-201ENST00000374737 ZMYM6O95789 1325 aa10.73□□□□□ -0.69
VSIG4-201ENST00000374737 FOCADQ5VW36 1801 aa10.73□□□□□ -0.69
VSIG4-201ENST00000374737 NAV1Q8NEY1 1877 aa10.73□□□□□ -0.69
VSIG4-201ENST00000374737 USP2O75604 605 aaPredicted RBP10.72□□□□□ -0.69
VSIG4-201ENST00000374737 SLC3A2P08195 630 aaKnown RBP10.72□□□□□ -0.69
VSIG4-201ENST00000374737 SHMT1P34896 483 aa10.72□□□□□ -0.69
VSIG4-201ENST00000374737 NF2P35240 595 aa10.72□□□□□ -0.69
VSIG4-201ENST00000374737 GABPAQ06546 454 aa10.72□□□□□ -0.69
VSIG4-201ENST00000374737 RRP1BQ14684 758 aaKnown RBP10.72□□□□□ -0.69
VSIG4-201ENST00000374737 SHROOM1Q2M3G4 852 aaPredicted RBP10.72□□□□□ -0.69
VSIG4-201ENST00000374737 AKNAD1Q5T1N1 836 aa10.72□□□□□ -0.69
VSIG4-201ENST00000374737 RNF20Q5VTR2 975 aa10.72□□□□□ -0.69
VSIG4-201ENST00000374737 MFSD6Q6ZSS7 791 aa10.72□□□□□ -0.69
VSIG4-201ENST00000374737 STOX1Q6ZVD7 989 aa10.72□□□□□ -0.69
VSIG4-201ENST00000374737 C16orf86Q6ZW13 317 aa10.72□□□□□ -0.69
VSIG4-201ENST00000374737 EHD4Q9H223 541 aa10.72□□□□□ -0.69
VSIG4-201ENST00000374737 ANAPC4Q9UJX5 808 aa10.72□□□□□ -0.69
VSIG4-201ENST00000374737 ANGEL1Q9UNK9 670 aaKnown RBP10.72□□□□□ -0.69
VSIG4-201ENST00000374737 SSC5DA1L4H1 1573 aa10.72□□□□□ -0.69
VSIG4-201ENST00000374737 E7EWF7 191 aa10.72□□□□□ -0.69
VSIG4-201ENST00000374737 PPP1R12BO60237 982 aaPredicted RBP10.72□□□□□ -0.69
VSIG4-201ENST00000374737 RANBP6O60518 1105 aaKnown RBP10.72□□□□□ -0.69
VSIG4-201ENST00000374737 GDF11O95390 407 aa10.72□□□□□ -0.69
VSIG4-201ENST00000374737 ZKSCAN1P17029 563 aaPredicted RBP10.72□□□□□ -0.69
VSIG4-201ENST00000374737 MCCP23508 829 aa10.72□□□□□ -0.69
VSIG4-201ENST00000374737 PDE4BQ07343 736 aa10.72□□□□□ -0.69
VSIG4-201ENST00000374737 COL9A3Q14050 684 aaPredicted RBP10.72□□□□□ -0.69
VSIG4-201ENST00000374737 ADCK5Q3MIX3 580 aa10.72□□□□□ -0.69
VSIG4-201ENST00000374737 FAM47AQ5JRC9 791 aa10.72□□□□□ -0.69
VSIG4-201ENST00000374737 CST9Q5W186 159 aa10.72□□□□□ -0.69
VSIG4-201ENST00000374737 ZNF444Q8N0Y2 327 aaPredicted RBP10.72□□□□□ -0.69
VSIG4-201ENST00000374737 RBM46Q8TBY0 533 aaKnown RBP10.72□□□□□ -0.69
VSIG4-201ENST00000374737 ZKSCAN4Q969J2 545 aaPredicted RBP10.72□□□□□ -0.69
VSIG4-201ENST00000374737 C22orf23Q9BZE7 217 aa10.72□□□□□ -0.69
VSIG4-201ENST00000374737 UPF2Q9HAU5 1272 aaKnown RBP10.72□□□□□ -0.69
VSIG4-201ENST00000374737 HERC5Q9UII4 1024 aaKnown RBP10.72□□□□□ -0.69
VSIG4-201ENST00000374737 SNX14Q9Y5W7 946 aa10.72□□□□□ -0.69
VSIG4-201ENST00000374737 NEDD4P46934 1319 aa10.72□□□□□ -0.69
VSIG4-201ENST00000374737 UBE2Q2LH0YL09 131 aa10.71□□□□□ -0.69
VSIG4-201ENST00000374737 MPHOSPH10O00566 681 aaKnown RBP10.71□□□□□ -0.69
VSIG4-201ENST00000374737 TBC1D12O60347 775 aa10.71□□□□□ -0.69
VSIG4-201ENST00000374737 EIF5BO60841 1220 aaKnown RBP10.71□□□□□ -0.69
VSIG4-201ENST00000374737 INPP5BP32019 993 aa10.71□□□□□ -0.69
VSIG4-201ENST00000374737 JAG1P78504 1218 aa10.71□□□□□ -0.69
VSIG4-201ENST00000374737 MAP3K10Q02779 954 aa10.71□□□□□ -0.69
VSIG4-201ENST00000374737 CERKLQ49MI3 558 aaPredicted RBP10.71□□□□□ -0.69
VSIG4-201ENST00000374737 DCAF15Q66K64 600 aa10.71□□□□□ -0.69
VSIG4-201ENST00000374737 CHST3Q7LGC8 479 aa10.71□□□□□ -0.69
VSIG4-201ENST00000374737 METTL16Q86W50 562 aaKnown RBP10.71□□□□□ -0.69
VSIG4-201ENST00000374737 STAG1Q8WVM7 1258 aa10.71□□□□□ -0.69
VSIG4-201ENST00000374737 HOOK2Q96ED9 719 aa10.71□□□□□ -0.69
VSIG4-201ENST00000374737 WRNIP1Q96S55 665 aa10.71□□□□□ -0.69
VSIG4-201ENST00000374737 ZNF341Q9BYN7 854 aa10.71□□□□□ -0.69
VSIG4-201ENST00000374737 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.71□□□□□ -0.69
VSIG4-201ENST00000374737 COL2A1P02458 1487 aaPredicted RBP10.71□□□□□ -0.7
VSIG4-201ENST00000374737 DDX60LQ5H9U9 1706 aaKnown RBP10.7□□□□□ -0.7
VSIG4-201ENST00000374737 PHF20L1A8MW92 1017 aa10.7□□□□□ -0.7
VSIG4-201ENST00000374737 B4E1Z4 1266 aa10.7□□□□□ -0.7
VSIG4-201ENST00000374737 CPA1P15085 419 aa10.7□□□□□ -0.7
VSIG4-201ENST00000374737 AKR1B1P15121 316 aa10.7□□□□□ -0.7
VSIG4-201ENST00000374737 RASA1P20936 1047 aa10.7□□□□□ -0.7
VSIG4-201ENST00000374737 TATDN1Q6P1N9 297 aa10.7□□□□□ -0.7
VSIG4-201ENST00000374737 KLRG1Q96E93 195 aa10.7□□□□□ -0.7
VSIG4-201ENST00000374737 RNF41Q9H4P4 317 aaPredicted RBP10.7□□□□□ -0.7
VSIG4-201ENST00000374737 SWAP70Q9UH65 585 aa10.7□□□□□ -0.7
VSIG4-201ENST00000374737 EPB41L2O43491 1005 aaKnown RBP10.7□□□□□ -0.7
VSIG4-201ENST00000374737 KDM4AO75164 1064 aa10.7□□□□□ -0.7
VSIG4-201ENST00000374737 TFAP4Q01664 338 aa10.7□□□□□ -0.7
VSIG4-201ENST00000374737 TRDNQ13061 729 aa10.7□□□□□ -0.7
VSIG4-201ENST00000374737 CCDC84Q86UT8 332 aaPredicted RBP10.7□□□□□ -0.7
VSIG4-201ENST00000374737 JAKMIP1Q96N16 626 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms