RNA–Protein interactions for RNA: ENST00000373993.5

A1CF-202, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene A1CF, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-202ENST00000373993 PARP10Q53GL7 1025 aa16.42■□□□□ 0.22
A1CF-202ENST00000373993 SOGA3Q5TF21 947 aa16.42■□□□□ 0.22
A1CF-202ENST00000373993 SLC4A10Q6U841 1118 aa16.42■□□□□ 0.22
A1CF-202ENST00000373993 C3orf67Q6ZVT6 689 aa16.42■□□□□ 0.22
A1CF-202ENST00000373993 FAM71BQ8TC56 605 aa16.42■□□□□ 0.22
A1CF-202ENST00000373993 DONSONQ9NYP3 566 aa16.42■□□□□ 0.22
A1CF-202ENST00000373993 DBF4Q9UBU7 674 aaPredicted RBP16.42■□□□□ 0.22
A1CF-202ENST00000373993 TOMM70O94826 608 aa16.42■□□□□ 0.22
A1CF-202ENST00000373993 HOXB7P09629 217 aa16.42■□□□□ 0.22
A1CF-202ENST00000373993 UBTFL1P0CB47 393 aaPredicted RBP16.42■□□□□ 0.22
A1CF-202ENST00000373993 TRDNQ13061 729 aa16.42■□□□□ 0.22
A1CF-202ENST00000373993 ADCK5Q3MIX3 580 aa16.42■□□□□ 0.22
A1CF-202ENST00000373993 PARD6BQ9BYG5 372 aa16.42■□□□□ 0.22
A1CF-202ENST00000373993 PPFIA4O75335 1185 aa16.41■□□□□ 0.22
A1CF-202ENST00000373993 HSP90AB3PQ58FF7 597 aa16.41■□□□□ 0.22
A1CF-202ENST00000373993 CWC27Q6UX04 472 aaKnown RBP16.41■□□□□ 0.22
A1CF-202ENST00000373993 TMC6Q7Z403 805 aa16.41■□□□□ 0.22
A1CF-202ENST00000373993 SLC51AQ86UW1 340 aa16.41■□□□□ 0.22
A1CF-202ENST00000373993 FERMT3Q86UX7 667 aa16.41■□□□□ 0.22
A1CF-202ENST00000373993 AOPEPQ8N6M6 819 aa16.41■□□□□ 0.22
A1CF-202ENST00000373993 MSANTD4Q8NCY6 345 aa16.41■□□□□ 0.22
A1CF-202ENST00000373993 LRRN4CLQ8ND94 238 aa16.41■□□□□ 0.22
A1CF-202ENST00000373993 GLTPD2A6NH11 291 aa16.4■□□□□ 0.22
A1CF-202ENST00000373993 ADD1P35611 737 aaKnown RBP16.4■□□□□ 0.22
A1CF-202ENST00000373993 PPP2R3AQ06190 1150 aa16.4■□□□□ 0.22
A1CF-202ENST00000373993 FLIIQ13045 1269 aa16.4■□□□□ 0.22
A1CF-202ENST00000373993 CRY2Q49AN0 593 aa16.4■□□□□ 0.22
A1CF-202ENST00000373993 TPRNQ4KMQ1 711 aa16.4■□□□□ 0.22
A1CF-202ENST00000373993 PACS2Q86VP3 889 aa16.4■□□□□ 0.22
A1CF-202ENST00000373993 CERS3Q8IU89 383 aa16.4■□□□□ 0.22
A1CF-202ENST00000373993 ERC1Q8IUD2 1116 aa16.4■□□□□ 0.22
A1CF-202ENST00000373993 SYNE4Q8N205 404 aa16.4■□□□□ 0.22
A1CF-202ENST00000373993 C7orf43Q8WVR3 580 aa16.4■□□□□ 0.22
A1CF-202ENST00000373993 ERCC4Q92889 916 aaPredicted RBP16.4■□□□□ 0.22
A1CF-202ENST00000373993 XPO4Q9C0E2 1151 aaKnown RBP16.4■□□□□ 0.22
A1CF-202ENST00000373993 VIPAS39Q9H9C1 493 aa16.4■□□□□ 0.22
A1CF-202ENST00000373993 ZNF277Q9NRM2 450 aaPredicted RBP16.4■□□□□ 0.22
A1CF-202ENST00000373993 ZC3H4Q9UPT8 1303 aaKnown RBP16.4■□□□□ 0.22
A1CF-202ENST00000373993 LOC102724159A0A0B4J2E5 919 aa16.4■□□□□ 0.22
A1CF-202ENST00000373993 TCIRG1Q13488 830 aa16.4■□□□□ 0.22
A1CF-202ENST00000373993 PWP2Q15269 919 aaKnown RBP16.4■□□□□ 0.22
A1CF-202ENST00000373993 ANKRD13DQ6ZTN6 518 aa16.4■□□□□ 0.22
A1CF-202ENST00000373993 NLRP10Q86W26 655 aa16.4■□□□□ 0.22
A1CF-202ENST00000373993 CEP112Q8N8E3 955 aa16.4■□□□□ 0.22
A1CF-202ENST00000373993 NECAB1Q8N987 351 aa16.4■□□□□ 0.22
A1CF-202ENST00000373993 SMARCC2Q8TAQ2 1214 aa16.4■□□□□ 0.22
A1CF-202ENST00000373993 NLRP3Q96P20 1036 aa16.4■□□□□ 0.22
A1CF-202ENST00000373993 USP44Q9H0E7 712 aa16.4■□□□□ 0.22
A1CF-202ENST00000373993 ZCCHC17Q9NP64 241 aaKnown RBP16.4■□□□□ 0.22
A1CF-202ENST00000373993 A1CFQ9NQ94 594 aaKnown RBP16.4■□□□□ 0.22
A1CF-202ENST00000373993 KIAA1468Q9P260 1216 aa16.4■□□□□ 0.22
A1CF-202ENST00000373993 TRMT112Q9UI30 125 aaKnown RBP16.4■□□□□ 0.22
A1CF-202ENST00000373993 RBM8AQ9Y5S9 174 aaKnown RBP16.4■□□□□ 0.22
A1CF-202ENST00000373993 LAMB2P55268 1798 aa16.39■□□□□ 0.21
A1CF-202ENST00000373993 ATP5J2-PTCD1G3V325 749 aa16.39■□□□□ 0.21
A1CF-202ENST00000373993 SEC31AO94979 1220 aaKnown RBP16.39■□□□□ 0.21
A1CF-202ENST00000373993 HSPA6P17066 643 aa16.39■□□□□ 0.21
A1CF-202ENST00000373993 PTH1RQ03431 593 aa16.39■□□□□ 0.21
A1CF-202ENST00000373993 MAPK8IP2Q13387 824 aaPredicted RBP16.39■□□□□ 0.21
A1CF-202ENST00000373993 PHAXQ9H814 394 aaKnown RBP16.39■□□□□ 0.21
A1CF-202ENST00000373993 LTBP3Q9NS15 1303 aa16.39■□□□□ 0.21
A1CF-202ENST00000373993 STX10O60499 249 aa16.38■□□□□ 0.21
A1CF-202ENST00000373993 SURF6O75683 361 aaKnown RBP16.38■□□□□ 0.21
A1CF-202ENST00000373993 NLRP12P59046 1061 aa16.38■□□□□ 0.21
A1CF-202ENST00000373993 MTX1Q13505 466 aa16.38■□□□□ 0.21
A1CF-202ENST00000373993 DNAJC21Q5F1R6 531 aaKnown RBP16.38■□□□□ 0.21
A1CF-202ENST00000373993 GORABQ5T7V8 394 aa16.38■□□□□ 0.21
A1CF-202ENST00000373993 ADALQ6DHV7 355 aa16.38■□□□□ 0.21
A1CF-202ENST00000373993 DPY19L2Q6NUT2 758 aa16.38■□□□□ 0.21
A1CF-202ENST00000373993 G2E3Q7L622 706 aa16.38■□□□□ 0.21
A1CF-202ENST00000373993 TICAM2Q86XR7 235 aa16.38■□□□□ 0.21
A1CF-202ENST00000373993 PLBD2Q8NHP8 589 aa16.38■□□□□ 0.21
A1CF-202ENST00000373993 RBM17Q96I25 401 aaKnown RBP16.38■□□□□ 0.21
A1CF-202ENST00000373993 ECHDC1Q9NTX5 307 aa16.38■□□□□ 0.21
A1CF-202ENST00000373993 H3BQV1 296 aa16.38■□□□□ 0.21
A1CF-202ENST00000373993 SLC27A2O14975 620 aa16.38■□□□□ 0.21
A1CF-202ENST00000373993 FKBP4Q02790 459 aaKnown RBP eCLIP16.38■□□□□ 0.21
A1CF-202ENST00000373993 BEND6Q5SZJ8 279 aaPredicted RBP16.38■□□□□ 0.21
A1CF-202ENST00000373993 IFFO2Q5TF58 517 aa16.38■□□□□ 0.21
A1CF-202ENST00000373993 FMR1NBQ8N0W7 255 aaPredicted RBP16.38■□□□□ 0.21
A1CF-202ENST00000373993 IFNKQ9P0W0 207 aa16.38■□□□□ 0.21
A1CF-202ENST00000373993 F6X3S4 739 aa16.37■□□□□ 0.21
A1CF-202ENST00000373993 APPP05067 770 aa16.37■□□□□ 0.21
A1CF-202ENST00000373993 TOB2Q14106 344 aaPredicted RBP16.37■□□□□ 0.21
A1CF-202ENST00000373993 FAM173BQ6P4H8 233 aa16.37■□□□□ 0.21
A1CF-202ENST00000373993 RIC3Q7Z5B4 369 aa16.37■□□□□ 0.21
A1CF-202ENST00000373993 CTCFLQ8NI51 663 aaPredicted RBP16.37■□□□□ 0.21
A1CF-202ENST00000373993 STAG1Q8WVM7 1258 aa16.37■□□□□ 0.21
A1CF-202ENST00000373993 L1RE1Q9UN81 338 aa16.37■□□□□ 0.21
A1CF-202ENST00000373993 TAF1P21675 1872 aa16.37■□□□□ 0.21
A1CF-202ENST00000373993 RIC1Q4ADV7 1423 aa16.37■□□□□ 0.21
A1CF-202ENST00000373993 A6NNZ2 444 aa16.37■□□□□ 0.21
A1CF-202ENST00000373993 PPEF1O14829 653 aaPredicted RBP16.37■□□□□ 0.21
A1CF-202ENST00000373993 TUBB8Q3ZCM7 444 aa16.37■□□□□ 0.21
A1CF-202ENST00000373993 HSP90B2PQ58FF3 399 aa16.37■□□□□ 0.21
A1CF-202ENST00000373993 SRGAP1Q7Z6B7 1085 aa16.37■□□□□ 0.21
A1CF-202ENST00000373993 TADA2BQ86TJ2 420 aa16.37■□□□□ 0.21
A1CF-202ENST00000373993 RTKN2Q8IZC4 609 aa16.37■□□□□ 0.21
A1CF-202ENST00000373993 MRPS27Q92552 414 aaKnown RBP16.37■□□□□ 0.21
A1CF-202ENST00000373993 BCCIPQ9P287 314 aaKnown RBP eCLIP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms