RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 LACTBP83111 547 aaPredicted RBP16.03■□□□□ 0.16
TRAF1-201ENST00000373887 RUFY3Q7L099 469 aa16.03■□□□□ 0.16
TRAF1-201ENST00000373887 PLEKHM2Q8IWE5 1019 aa16.03■□□□□ 0.16
TRAF1-201ENST00000373887 SPATA5Q8NB90 893 aa16.03■□□□□ 0.16
TRAF1-201ENST00000373887 PAGR1Q9BTK6 254 aa16.03■□□□□ 0.16
TRAF1-201ENST00000373887 CCDC14Q49A88 953 aa16.03■□□□□ 0.16
TRAF1-201ENST00000373887 FAM227BQ96M60 508 aa16.03■□□□□ 0.16
TRAF1-201ENST00000373887 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.03■□□□□ 0.16
TRAF1-201ENST00000373887 ZAP70P43403 619 aa16.03■□□□□ 0.16
TRAF1-201ENST00000373887 FAM47AQ5JRC9 791 aa16.03■□□□□ 0.16
TRAF1-201ENST00000373887 FAM76AQ8TAV0 307 aa16.03■□□□□ 0.16
TRAF1-201ENST00000373887 KIF3CO14782 793 aa16.03■□□□□ 0.16
TRAF1-201ENST00000373887 RXRBP28702 533 aa16.03■□□□□ 0.16
TRAF1-201ENST00000373887 ALDH3A1P30838 453 aa16.03■□□□□ 0.16
TRAF1-201ENST00000373887 DHX32Q7L7V1 743 aaKnown RBP16.03■□□□□ 0.16
TRAF1-201ENST00000373887 KRT9P35527 623 aa16.03■□□□□ 0.16
TRAF1-201ENST00000373887 TCIRG1Q13488 830 aa16.03■□□□□ 0.16
TRAF1-201ENST00000373887 PPFIBP2Q8ND30 876 aa16.03■□□□□ 0.16
TRAF1-201ENST00000373887 SUPT20HQ8NEM7 779 aa16.03■□□□□ 0.16
TRAF1-201ENST00000373887 KIFC2Q96AC6 838 aa16.03■□□□□ 0.16
TRAF1-201ENST00000373887 TCOF1Q13428 1488 aaKnown RBP16.02■□□□□ 0.16
TRAF1-201ENST00000373887 H7C1D1 291 aa16.02■□□□□ 0.16
TRAF1-201ENST00000373887 NOP56O00567 594 aaKnown RBP16.02■□□□□ 0.16
TRAF1-201ENST00000373887 GPAA1O43292 621 aa16.02■□□□□ 0.16
TRAF1-201ENST00000373887 USPL1Q5W0Q7 1092 aa16.02■□□□□ 0.16
TRAF1-201ENST00000373887 NSMFQ6X4W1 530 aa16.02■□□□□ 0.16
TRAF1-201ENST00000373887 GBP6Q6ZN66 633 aa16.02■□□□□ 0.16
TRAF1-201ENST00000373887 RABEP2Q9H5N1 569 aa16.02■□□□□ 0.16
TRAF1-201ENST00000373887 TTF2Q9UNY4 1162 aaKnown RBP16.02■□□□□ 0.16
TRAF1-201ENST00000373887 AGTPBP1Q9UPW5 1226 aa16.02■□□□□ 0.16
TRAF1-201ENST00000373887 CHMLP26374 656 aa16.02■□□□□ 0.16
TRAF1-201ENST00000373887 PDE6BP35913 854 aa16.02■□□□□ 0.16
TRAF1-201ENST00000373887 RNASE9P60153 205 aaKnown RBP16.02■□□□□ 0.16
TRAF1-201ENST00000373887 DTHD1Q6ZMT9 781 aa16.02■□□□□ 0.16
TRAF1-201ENST00000373887 TTLL7Q6ZT98 887 aa16.02■□□□□ 0.16
TRAF1-201ENST00000373887 PIK3AP1Q6ZUJ8 805 aa16.02■□□□□ 0.16
TRAF1-201ENST00000373887 CCDC169A6NNP5 214 aa16.02■□□□□ 0.16
TRAF1-201ENST00000373887 SPTLC2O15270 562 aa16.02■□□□□ 0.16
TRAF1-201ENST00000373887 SMCR8Q8TEV9 937 aaPredicted RBP16.02■□□□□ 0.16
TRAF1-201ENST00000373887 USP40Q9NVE5 1235 aa16.02■□□□□ 0.16
TRAF1-201ENST00000373887 SEL1L2Q5TEA6 688 aa16.02■□□□□ 0.15
TRAF1-201ENST00000373887 VPS52Q8N1B4 723 aa16.02■□□□□ 0.15
TRAF1-201ENST00000373887 HELLSQ9NRZ9 838 aa16.02■□□□□ 0.15
TRAF1-201ENST00000373887 IFNKQ9P0W0 207 aa16.02■□□□□ 0.15
TRAF1-201ENST00000373887 BMP15O95972 392 aa16.01■□□□□ 0.15
TRAF1-201ENST00000373887 PPP2R5CQ13362 524 aa16.01■□□□□ 0.15
TRAF1-201ENST00000373887 NCOA5Q9HCD5 579 aaKnown RBP16.01■□□□□ 0.15
TRAF1-201ENST00000373887 KIAA0825Q8IV33 1275 aa16.01■□□□□ 0.15
TRAF1-201ENST00000373887 FAM114A2Q9NRY5 505 aa16.01■□□□□ 0.15
TRAF1-201ENST00000373887 F13A1P00488 732 aa16.01■□□□□ 0.15
TRAF1-201ENST00000373887 IRX3P78415 501 aaPredicted RBP16.01■□□□□ 0.15
TRAF1-201ENST00000373887 CALCOCO2Q13137 446 aa16.01■□□□□ 0.15
TRAF1-201ENST00000373887 GCKRQ14397 625 aa16.01■□□□□ 0.15
TRAF1-201ENST00000373887 RBM28Q9NW13 759 aaKnown RBP16.01■□□□□ 0.15
TRAF1-201ENST00000373887 ATF5Q9Y2D1 282 aaPredicted RBP16.01■□□□□ 0.15
TRAF1-201ENST00000373887 GYG1P46976 350 aa16.01■□□□□ 0.15
TRAF1-201ENST00000373887 VAV2P52735 878 aa16.01■□□□□ 0.15
TRAF1-201ENST00000373887 SF3A3Q12874 501 aaKnown RBP eCLIP16.01■□□□□ 0.15
TRAF1-201ENST00000373887 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.01■□□□□ 0.15
TRAF1-201ENST00000373887 ZBTB40Q9NUA8 1239 aa16.01■□□□□ 0.15
TRAF1-201ENST00000373887 PNMA6EA0A0J9YXQ4 647 aa16.01■□□□□ 0.15
TRAF1-201ENST00000373887 E7EVH7 732 aa16.01■□□□□ 0.15
TRAF1-201ENST00000373887 ATP11AP98196 1134 aa16.01■□□□□ 0.15
TRAF1-201ENST00000373887 INF2Q27J81 1249 aa16.01■□□□□ 0.15
TRAF1-201ENST00000373887 LEO1Q8WVC0 666 aaPredicted RBP16.01■□□□□ 0.15
TRAF1-201ENST00000373887 LPIN2Q92539 896 aa16.01■□□□□ 0.15
TRAF1-201ENST00000373887 V9GY48 417 aaPredicted RBP16.01■□□□□ 0.15
TRAF1-201ENST00000373887 CFAP43Q8NDM7 1665 aa16■□□□□ 0.15
TRAF1-201ENST00000373887 PHKG2P15735 406 aa16■□□□□ 0.15
TRAF1-201ENST00000373887 PPP2R5DQ14738 602 aa16■□□□□ 0.15
TRAF1-201ENST00000373887 GKAP1Q5VSY0 366 aaPredicted RBP16■□□□□ 0.15
TRAF1-201ENST00000373887 KRBA2Q6ZNG9 492 aa16■□□□□ 0.15
TRAF1-201ENST00000373887 MAST3O60307 1309 aa16■□□□□ 0.15
TRAF1-201ENST00000373887 ZNF532Q9HCE3 1301 aa16■□□□□ 0.15
TRAF1-201ENST00000373887 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16■□□□□ 0.15
TRAF1-201ENST00000373887 CCDC110Q8TBZ0 833 aa16■□□□□ 0.15
TRAF1-201ENST00000373887 PPANQ9NQ55 473 aaKnown RBP16■□□□□ 0.15
TRAF1-201ENST00000373887 FAM170AA1A519 330 aa16■□□□□ 0.15
TRAF1-201ENST00000373887 RFC1P35251 1148 aaPredicted RBP16■□□□□ 0.15
TRAF1-201ENST00000373887 SLC1A4P43007 532 aa16■□□□□ 0.15
TRAF1-201ENST00000373887 TYRO3Q06418 890 aa16■□□□□ 0.15
TRAF1-201ENST00000373887 MFSD14BQ5SR56 506 aa16■□□□□ 0.15
TRAF1-201ENST00000373887 PPP1R12CQ9BZL4 782 aa16■□□□□ 0.15
TRAF1-201ENST00000373887 NKIRAS1Q9NYS0 192 aa16■□□□□ 0.15
TRAF1-201ENST00000373887 SHANK2Q9UPX8 1470 aa16■□□□□ 0.15
TRAF1-201ENST00000373887 GAS8O95995 478 aa16■□□□□ 0.15
TRAF1-201ENST00000373887 CCT6AP40227 531 aaKnown RBP16■□□□□ 0.15
TRAF1-201ENST00000373887 TNNC1P63316 161 aa16■□□□□ 0.15
TRAF1-201ENST00000373887 NCAPH2Q6IBW4 605 aa16■□□□□ 0.15
TRAF1-201ENST00000373887 TRPC5Q9UL62 973 aaPredicted RBP16■□□□□ 0.15
TRAF1-201ENST00000373887 ABCA5Q8WWZ7 1642 aa15.99■□□□□ 0.15
TRAF1-201ENST00000373887 BICDL2A1A5D9 508 aa15.99■□□□□ 0.15
TRAF1-201ENST00000373887 PCK1P35558 622 aa15.99■□□□□ 0.15
TRAF1-201ENST00000373887 EIF4A1P60842 406 aaKnown RBP15.99■□□□□ 0.15
TRAF1-201ENST00000373887 CFBP00751 764 aa15.99■□□□□ 0.15
TRAF1-201ENST00000373887 CTSWP56202 376 aa15.99■□□□□ 0.15
TRAF1-201ENST00000373887 NEDD9Q14511 834 aa15.99■□□□□ 0.15
TRAF1-201ENST00000373887 DNMT1P26358 1616 aaKnown RBP15.99■□□□□ 0.15
TRAF1-201ENST00000373887 MSANTD4Q8NCY6 345 aa15.99■□□□□ 0.15
TRAF1-201ENST00000373887 TRIM35Q9UPQ4 493 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms