RNA–Protein interactions for RNA: ENST00000373645.3

SP140-202, Transcript of SP140 nuclear body protein, humanhuman

TSL 1 (best) BASIC

Gene SP140, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-202ENST00000373645 DOCK3Q8IZD9 2030 aa9.45□□□□□ -0.9
SP140-202ENST00000373645 ST18O60284 1047 aa9.45□□□□□ -0.9
SP140-202ENST00000373645 FRAT2O75474 233 aaPredicted RBP9.45□□□□□ -0.9
SP140-202ENST00000373645 CIAO1O76071 339 aa9.45□□□□□ -0.9
SP140-202ENST00000373645 GNRH1P01148 92 aa9.45□□□□□ -0.9
SP140-202ENST00000373645 GJB1P08034 283 aa9.45□□□□□ -0.9
SP140-202ENST00000373645 BCRP11274 1271 aa9.45□□□□□ -0.9
SP140-202ENST00000373645 HDLBPQ00341 1268 aaKnown RBP9.45□□□□□ -0.9
SP140-202ENST00000373645 PPATQ06203 517 aa9.45□□□□□ -0.9
SP140-202ENST00000373645 ANKRD45Q5TZF3 282 aa9.45□□□□□ -0.9
SP140-202ENST00000373645 CCDC84Q86UT8 332 aaPredicted RBP9.45□□□□□ -0.9
SP140-202ENST00000373645 ZNF341Q9BYN7 854 aa9.45□□□□□ -0.9
SP140-202ENST00000373645 TMOD2Q9NZR1 351 aa9.45□□□□□ -0.9
SP140-202ENST00000373645 BIN2Q9UBW5 565 aaPredicted RBP9.45□□□□□ -0.9
SP140-202ENST00000373645 MROH5Q6ZUA9 1318 aa9.45□□□□□ -0.9
SP140-202ENST00000373645 ATRNL1Q5VV63 1379 aa9.45□□□□□ -0.9
SP140-202ENST00000373645 AK9Q5TCS8 1911 aa9.44□□□□□ -0.9
SP140-202ENST00000373645 EYA2O00167 538 aa9.44□□□□□ -0.9
SP140-202ENST00000373645 DLL1O00548 723 aa9.44□□□□□ -0.9
SP140-202ENST00000373645 PRDX5P30044 214 aa9.44□□□□□ -0.9
SP140-202ENST00000373645 IL15P40933 162 aaPredicted RBP9.44□□□□□ -0.9
SP140-202ENST00000373645 PRMT2P55345 433 aa9.44□□□□□ -0.9
SP140-202ENST00000373645 NUCB1Q02818 461 aa9.44□□□□□ -0.9
SP140-202ENST00000373645 OS9Q13438 667 aaPredicted RBP9.44□□□□□ -0.9
SP140-202ENST00000373645 FKBP1CQ5VVH2 108 aa9.44□□□□□ -0.9
SP140-202ENST00000373645 DCAF15Q66K64 600 aa9.44□□□□□ -0.9
SP140-202ENST00000373645 CDC42EP5Q6NZY7 148 aa9.44□□□□□ -0.9
SP140-202ENST00000373645 ATG9AQ7Z3C6 839 aa9.44□□□□□ -0.9
SP140-202ENST00000373645 SLAIN1Q8ND83 568 aa9.44□□□□□ -0.9
SP140-202ENST00000373645 RHPN1Q8TCX5 695 aa9.44□□□□□ -0.9
SP140-202ENST00000373645 DIS3LQ8TF46 1054 aaKnown RBP9.44□□□□□ -0.9
SP140-202ENST00000373645 TBC1D22AQ8WUA7 517 aa9.44□□□□□ -0.9
SP140-202ENST00000373645 KIF1BPQ96EK5 621 aa9.44□□□□□ -0.9
SP140-202ENST00000373645 LRRCC1Q9C099 1032 aa9.44□□□□□ -0.9
SP140-202ENST00000373645 SIL1Q9H173 461 aa9.44□□□□□ -0.9
SP140-202ENST00000373645 FAM198AQ9UFP1 575 aa9.44□□□□□ -0.9
SP140-202ENST00000373645 ZNF112Q9UJU3 913 aa9.44□□□□□ -0.9
SP140-202ENST00000373645 PTPRFP10586 1907 aa9.44□□□□□ -0.9
SP140-202ENST00000373645 MYH13Q9UKX3 1938 aa9.44□□□□□ -0.9
SP140-202ENST00000373645 CUL9Q8IWT3 2517 aa9.44□□□□□ -0.9
SP140-202ENST00000373645 APBB1O00213 710 aa9.43□□□□□ -0.9
SP140-202ENST00000373645 WDHD1O75717 1129 aaPredicted RBP9.43□□□□□ -0.9
SP140-202ENST00000373645 PDE8BO95263 885 aa9.43□□□□□ -0.9
SP140-202ENST00000373645 INHAP05111 366 aa9.43□□□□□ -0.9
SP140-202ENST00000373645 FGFR2P21802 821 aa9.43□□□□□ -0.9
SP140-202ENST00000373645 CAVIN4Q5BKX8 364 aa9.43□□□□□ -0.9
SP140-202ENST00000373645 NOL9Q5SY16 702 aaKnown RBP9.43□□□□□ -0.9
SP140-202ENST00000373645 HHIPL2Q6UWX4 724 aa9.43□□□□□ -0.9
SP140-202ENST00000373645 CHD1LQ86WJ1 897 aa9.43□□□□□ -0.9
SP140-202ENST00000373645 SLC17A8Q8NDX2 589 aa9.43□□□□□ -0.9
SP140-202ENST00000373645 PARK7Q99497 189 aaKnown RBP9.43□□□□□ -0.9
SP140-202ENST00000373645 CEP126Q9P2H0 1117 aa9.43□□□□□ -0.9
SP140-202ENST00000373645 STAP2Q9UGK3 403 aa9.43□□□□□ -0.9
SP140-202ENST00000373645 DOCK2Q92608 1830 aa9.42□□□□□ -0.9
SP140-202ENST00000373645 MAST3O60307 1309 aa9.42□□□□□ -0.9
SP140-202ENST00000373645 A0A0C4DFX4 3053 aa9.42□□□□□ -0.9
SP140-202ENST00000373645 SMARCA5O60264 1052 aaPredicted RBP9.42□□□□□ -0.9
SP140-202ENST00000373645 ADCY3O60266 1144 aa9.42□□□□□ -0.9
SP140-202ENST00000373645 FLT3LGP49771 235 aa9.42□□□□□ -0.9
SP140-202ENST00000373645 FCGRTP55899 365 aa9.42□□□□□ -0.9
SP140-202ENST00000373645 SH3BP5LQ7L8J4 393 aa9.42□□□□□ -0.9
SP140-202ENST00000373645 CLASRPQ8N2M8 674 aaKnown RBP9.42□□□□□ -0.9
SP140-202ENST00000373645 NKX2-3Q8TAU0 364 aa9.42□□□□□ -0.9
SP140-202ENST00000373645 FAM151AQ8WW52 585 aa9.42□□□□□ -0.9
SP140-202ENST00000373645 DEFB118Q96PH6 123 aa9.42□□□□□ -0.9
SP140-202ENST00000373645 HTATIP2Q9BUP3 242 aa9.42□□□□□ -0.9
SP140-202ENST00000373645 RFX7Q2KHR2 1363 aa9.41□□□□□ -0.9
SP140-202ENST00000373645 PHIPQ8WWQ0 1821 aa9.41□□□□□ -0.9
SP140-202ENST00000373645 A0A0G2JLL6 359 aaPredicted RBP9.41□□□□□ -0.9
SP140-202ENST00000373645 PHF20L1A8MW92 1017 aa9.41□□□□□ -0.9
SP140-202ENST00000373645 MAP3K13O43283 966 aa9.41□□□□□ -0.9
SP140-202ENST00000373645 SGPL1O95470 568 aa9.41□□□□□ -0.9
SP140-202ENST00000373645 HOXD10P28358 340 aa9.41□□□□□ -0.9
SP140-202ENST00000373645 UBXN2AP68543 259 aa9.41□□□□□ -0.9
SP140-202ENST00000373645 TFCP2Q12800 502 aa9.41□□□□□ -0.9
SP140-202ENST00000373645 PUM3Q15397 648 aaKnown RBP9.41□□□□□ -0.9
SP140-202ENST00000373645 GADL1Q6ZQY3 521 aa9.41□□□□□ -0.9
SP140-202ENST00000373645 Q7L0L9 218 aa9.41□□□□□ -0.9
SP140-202ENST00000373645 PRRT2Q7Z6L0 340 aaPredicted RBP9.41□□□□□ -0.9
SP140-202ENST00000373645 SPNS2Q8IVW8 549 aa9.41□□□□□ -0.9
SP140-202ENST00000373645 MRIQ9BWK5 157 aa9.41□□□□□ -0.9
SP140-202ENST00000373645 LNPKQ9C0E8 428 aa9.41□□□□□ -0.9
SP140-202ENST00000373645 IL1RAPL2Q9NP60 686 aa9.41□□□□□ -0.9
SP140-202ENST00000373645 GPR108Q9NPR9 543 aa9.41□□□□□ -0.9
SP140-202ENST00000373645 TAOK2Q9UL54 1235 aa9.41□□□□□ -0.9
SP140-202ENST00000373645 ZMYND8Q9ULU4 1186 aaPredicted RBP9.41□□□□□ -0.9
SP140-202ENST00000373645 NR2E3Q9Y5X4 410 aa9.41□□□□□ -0.9
SP140-202ENST00000373645 ZHX2Q9Y6X8 837 aa9.41□□□□□ -0.9
SP140-202ENST00000373645 FAM196BA6NMK8 535 aa9.4□□□□□ -0.9
SP140-202ENST00000373645 TTLL13PA6NNM8 815 aa9.4□□□□□ -0.9
SP140-202ENST00000373645 EVI5O60447 810 aa9.4□□□□□ -0.9
SP140-202ENST00000373645 IFIT1P09914 478 aaKnown RBP9.4□□□□□ -0.9
SP140-202ENST00000373645 PTPRAP18433 802 aa9.4□□□□□ -0.9
SP140-202ENST00000373645 RGS3P49796 1198 aa9.4□□□□□ -0.9
SP140-202ENST00000373645 TRIM32Q13049 653 aa9.4□□□□□ -0.9
SP140-202ENST00000373645 TREML2Q5T2D2 321 aa9.4□□□□□ -0.9
SP140-202ENST00000373645 SCYL3Q8IZE3 742 aa9.4□□□□□ -0.9
SP140-202ENST00000373645 HOOK2Q96ED9 719 aa9.4□□□□□ -0.9
SP140-202ENST00000373645 PAWRQ96IZ0 340 aaKnown RBP9.4□□□□□ -0.9
SP140-202ENST00000373645 DDX4Q9NQI0 724 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms