RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 NCLP19338 710 aaKnown RBP18.35■□□□□ 0.53
HDAC8-209ENST00000373589 KRT85P78386 507 aa18.35■□□□□ 0.53
HDAC8-209ENST00000373589 PDE4BQ07343 736 aa18.35■□□□□ 0.53
HDAC8-209ENST00000373589 CSPP1Q1MSJ5 1256 aa18.35■□□□□ 0.53
HDAC8-209ENST00000373589 CC2D2BQ6DHV5 1058 aa18.35■□□□□ 0.53
HDAC8-209ENST00000373589 FAM173BQ6P4H8 233 aa18.35■□□□□ 0.53
HDAC8-209ENST00000373589 SYNE3Q6ZMZ3 975 aa18.35■□□□□ 0.53
HDAC8-209ENST00000373589 CCDC125Q86Z20 511 aa18.35■□□□□ 0.53
HDAC8-209ENST00000373589 ENAHQ8N8S7 591 aaPredicted RBP18.35■□□□□ 0.53
HDAC8-209ENST00000373589 DAGLAQ9Y4D2 1042 aa18.35■□□□□ 0.53
HDAC8-209ENST00000373589 FSD2A1L4K1 749 aa18.34■□□□□ 0.53
HDAC8-209ENST00000373589 FIBPO43427 364 aa18.34■□□□□ 0.53
HDAC8-209ENST00000373589 CAVIN1Q6NZI2 390 aaKnown RBP18.34■□□□□ 0.53
HDAC8-209ENST00000373589 CPLX2Q6PUV4 134 aaKnown RBP18.34■□□□□ 0.53
HDAC8-209ENST00000373589 IQCA1Q86XH1 822 aa18.34■□□□□ 0.53
HDAC8-209ENST00000373589 G3V3G9 751 aa18.33■□□□□ 0.52
HDAC8-209ENST00000373589 DCAF8Q5TAQ9 597 aa18.33■□□□□ 0.52
HDAC8-209ENST00000373589 CCDC144CPQ8IYA2 1237 aa18.33■□□□□ 0.52
HDAC8-209ENST00000373589 TEX11Q8IYF3 940 aa18.33■□□□□ 0.52
HDAC8-209ENST00000373589 ZNF654Q8IZM8 581 aa18.33■□□□□ 0.52
HDAC8-209ENST00000373589 UBE2HP62256 183 aa18.32■□□□□ 0.52
HDAC8-209ENST00000373589 MAPKAPK5Q8IW41 473 aa18.32■□□□□ 0.52
HDAC8-209ENST00000373589 FBXO18Q8NFZ0 1043 aa18.32■□□□□ 0.52
HDAC8-209ENST00000373589 FBXW7Q969H0 707 aa18.32■□□□□ 0.52
HDAC8-209ENST00000373589 DBNDD1Q9H9R9 158 aa18.32■□□□□ 0.52
HDAC8-209ENST00000373589 ELP1O95163 1332 aa18.32■□□□□ 0.52
HDAC8-209ENST00000373589 IFNAR1P17181 557 aa18.32■□□□□ 0.52
HDAC8-209ENST00000373589 FOSBP53539 338 aa18.32■□□□□ 0.52
HDAC8-209ENST00000373589 FKBP1AP62942 108 aaKnown RBP18.32■□□□□ 0.52
HDAC8-209ENST00000373589 AMOTL1Q8IY63 956 aa18.32■□□□□ 0.52
HDAC8-209ENST00000373589 C8orf76Q96K31 380 aa18.32■□□□□ 0.52
HDAC8-209ENST00000373589 MXD3Q9BW11 206 aa18.32■□□□□ 0.52
HDAC8-209ENST00000373589 ZNF219Q9P2Y4 722 aaPredicted RBP18.32■□□□□ 0.52
HDAC8-209ENST00000373589 NAV1Q8NEY1 1877 aa18.32■□□□□ 0.52
HDAC8-209ENST00000373589 FLT1P17948 1338 aa18.31■□□□□ 0.52
HDAC8-209ENST00000373589 STK36Q9NRP7 1315 aa18.31■□□□□ 0.52
HDAC8-209ENST00000373589 DDX60LQ5H9U9 1706 aaKnown RBP18.31■□□□□ 0.52
HDAC8-209ENST00000373589 DLEC1Q9Y238 1755 aa18.31■□□□□ 0.52
HDAC8-209ENST00000373589 CDK5RAP2Q96SN8 1893 aa18.31■□□□□ 0.52
HDAC8-209ENST00000373589 PPP2R5BQ15173 497 aa18.31■□□□□ 0.52
HDAC8-209ENST00000373589 RTN1Q16799 776 aa18.31■□□□□ 0.52
HDAC8-209ENST00000373589 IFIT1BQ5T764 474 aaKnown RBP18.31■□□□□ 0.52
HDAC8-209ENST00000373589 TTC6Q86TZ1 520 aa18.31■□□□□ 0.52
HDAC8-209ENST00000373589 FANCBQ8NB91 859 aa18.31■□□□□ 0.52
HDAC8-209ENST00000373589 SCAND2PQ9GZW5 306 aaPredicted RBP18.31■□□□□ 0.52
HDAC8-209ENST00000373589 KCNQ5Q9NR82 932 aa18.31■□□□□ 0.52
HDAC8-209ENST00000373589 TMEM63CQ9P1W3 806 aa18.31■□□□□ 0.52
HDAC8-209ENST00000373589 RBM27Q9P2N5 1060 aaKnown RBP18.31■□□□□ 0.52
HDAC8-209ENST00000373589 ISY1Q9ULR0 285 aaKnown RBP18.31■□□□□ 0.52
HDAC8-209ENST00000373589 TTF2Q9UNY4 1162 aaKnown RBP18.31■□□□□ 0.52
HDAC8-209ENST00000373589 CCDC196A0A1B0GTZ2 297 aa18.3■□□□□ 0.52
HDAC8-209ENST00000373589 IARSP41252 1262 aaKnown RBP18.3■□□□□ 0.52
HDAC8-209ENST00000373589 PLCD1P51178 756 aa18.3■□□□□ 0.52
HDAC8-209ENST00000373589 GUCY1B3Q02153 619 aa18.3■□□□□ 0.52
HDAC8-209ENST00000373589 KIAA2012Q0VF49 1180 aa18.3■□□□□ 0.52
HDAC8-209ENST00000373589 ZSCAN23Q3MJ62 389 aa18.3■□□□□ 0.52
HDAC8-209ENST00000373589 FAM47AQ5JRC9 791 aa18.3■□□□□ 0.52
HDAC8-209ENST00000373589 STRIP1Q5VSL9 837 aa18.3■□□□□ 0.52
HDAC8-209ENST00000373589 PHKBQ93100 1093 aa18.3■□□□□ 0.52
HDAC8-209ENST00000373589 DYNLL2Q96FJ2 89 aa18.3■□□□□ 0.52
HDAC8-209ENST00000373589 F8W031 263 aaPredicted RBP18.29■□□□□ 0.52
HDAC8-209ENST00000373589 ECE2O60344 883 aa18.29■□□□□ 0.52
HDAC8-209ENST00000373589 FMNL1O95466 1100 aaPredicted RBP18.29■□□□□ 0.52
HDAC8-209ENST00000373589 KCNA3P22001 575 aa18.29■□□□□ 0.52
HDAC8-209ENST00000373589 ZNF445P59923 1031 aa18.29■□□□□ 0.52
HDAC8-209ENST00000373589 SLC4A8Q2Y0W8 1093 aa18.29■□□□□ 0.52
HDAC8-209ENST00000373589 GRIPAP1Q4V328 841 aa18.29■□□□□ 0.52
HDAC8-209ENST00000373589 HHIPL2Q6UWX4 724 aa18.29■□□□□ 0.52
HDAC8-209ENST00000373589 ILDR1Q86SU0 546 aaPredicted RBP18.29■□□□□ 0.52
HDAC8-209ENST00000373589 TTLL6Q8N841 843 aa18.29■□□□□ 0.52
HDAC8-209ENST00000373589 SUPT20HQ8NEM7 779 aa18.29■□□□□ 0.52
HDAC8-209ENST00000373589 SAP30BPQ9UHR5 308 aaKnown RBP18.29■□□□□ 0.52
HDAC8-209ENST00000373589 GOLGA6L3A6NEY3 463 aa18.29■□□□□ 0.52
HDAC8-209ENST00000373589 POLR3DP05423 398 aaPredicted RBP18.29■□□□□ 0.52
HDAC8-209ENST00000373589 TROAPQ12815 778 aa18.29■□□□□ 0.52
HDAC8-209ENST00000373589 DACT2Q5SW24 774 aa18.29■□□□□ 0.52
HDAC8-209ENST00000373589 OTUD7BQ6GQQ9 843 aa18.29■□□□□ 0.52
HDAC8-209ENST00000373589 NBPF11Q86T75 865 aa18.29■□□□□ 0.52
HDAC8-209ENST00000373589 LEO1Q8WVC0 666 aaPredicted RBP18.29■□□□□ 0.52
HDAC8-209ENST00000373589 ALG1Q9BT22 464 aa18.29■□□□□ 0.52
HDAC8-209ENST00000373589 MRIQ9BWK5 157 aa18.29■□□□□ 0.52
HDAC8-209ENST00000373589 TFIP11Q9UBB9 837 aaKnown RBP18.29■□□□□ 0.52
HDAC8-209ENST00000373589 TSPY2A6NKD2 308 aa18.28■□□□□ 0.52
HDAC8-209ENST00000373589 C21orf2O43822 256 aa18.28■□□□□ 0.52
HDAC8-209ENST00000373589 NMT2O60551 498 aa18.28■□□□□ 0.52
HDAC8-209ENST00000373589 SSRP1Q08945 709 aaKnown RBP18.28■□□□□ 0.52
HDAC8-209ENST00000373589 AOC3Q16853 763 aa18.28■□□□□ 0.52
HDAC8-209ENST00000373589 ATL3Q6DD88 541 aa18.28■□□□□ 0.52
HDAC8-209ENST00000373589 CATIPQ7Z7H3 387 aa18.28■□□□□ 0.52
HDAC8-209ENST00000373589 GAS2L3Q86XJ1 694 aa18.28■□□□□ 0.52
HDAC8-209ENST00000373589 NUP133Q8WUM0 1156 aa18.28■□□□□ 0.52
HDAC8-209ENST00000373589 GOLGB1Q14789 3259 aaKnown RBP18.28■□□□□ 0.52
HDAC8-209ENST00000373589 DDAH1O94760 285 aa18.27■□□□□ 0.52
HDAC8-209ENST00000373589 CALM1P0DP23 149 aa18.27■□□□□ 0.52
HDAC8-209ENST00000373589 CALM2P0DP24 149 aa18.27■□□□□ 0.52
HDAC8-209ENST00000373589 CALM3P0DP25 149 aa18.27■□□□□ 0.52
HDAC8-209ENST00000373589 DPEP1P16444 411 aa18.27■□□□□ 0.52
HDAC8-209ENST00000373589 TFAP4Q01664 338 aa18.27■□□□□ 0.52
HDAC8-209ENST00000373589 RCSD1Q6JBY9 416 aa18.27■□□□□ 0.52
HDAC8-209ENST00000373589 C16orf86Q6ZW13 317 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms