RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.98□□□□□ -0.494e-6■■□□□ 11.4
PGK1-201ENST00000373316 AKR1B15C9JRZ8 316 aaPredicted RBP11.98□□□□□ -0.49
PGK1-201ENST00000373316 AKR1B10O60218 316 aa11.98□□□□□ -0.49
PGK1-201ENST00000373316 KRT79Q5XKE5 535 aa11.98□□□□□ -0.49
PGK1-201ENST00000373316 MPHOSPH10O00566 681 aaKnown RBP11.97□□□□□ -0.49
PGK1-201ENST00000373316 ARHGAP6O43182 974 aa11.97□□□□□ -0.49
PGK1-201ENST00000373316 RPL13P26373 211 aaKnown RBP11.97□□□□□ -0.49
PGK1-201ENST00000373316 RPAP1Q9BWH6 1393 aaPredicted RBP11.97□□□□□ -0.49
PGK1-201ENST00000373316 TTC14Q96N46 770 aa11.97□□□□□ -0.49
PGK1-201ENST00000373316 KCNG1Q9UIX4 513 aa11.97□□□□□ -0.49
PGK1-201ENST00000373316 IRS4O14654 1257 aaPredicted RBP11.97□□□□□ -0.49
PGK1-201ENST00000373316 ITPK1Q13572 414 aa11.97□□□□□ -0.49
PGK1-201ENST00000373316 HDXQ7Z353 690 aa11.97□□□□□ -0.49
PGK1-201ENST00000373316 TMTC1Q8IUR5 882 aa11.97□□□□□ -0.49
PGK1-201ENST00000373316 LPIN2Q92539 896 aa11.97□□□□□ -0.49
PGK1-201ENST00000373316 CUL4AQ13619 759 aa11.97□□□□□ -0.49
PGK1-201ENST00000373316 A0A1W2PQ27 194 aa11.96□□□□□ -0.49
PGK1-201ENST00000373316 A0A1W2PQ64 194 aa11.96□□□□□ -0.49
PGK1-201ENST00000373316 A0A1W2PQD8 194 aa11.96□□□□□ -0.49
PGK1-201ENST00000373316 MAP2K1Q02750 393 aaPredicted RBP11.96□□□□□ -0.49
PGK1-201ENST00000373316 ENOX2Q16206 610 aaKnown RBP11.96□□□□□ -0.49
PGK1-201ENST00000373316 CNNM4Q6P4Q7 775 aa11.96□□□□□ -0.49
PGK1-201ENST00000373316 TPTE2Q6XPS3 522 aa11.96□□□□□ -0.49
PGK1-201ENST00000373316 DTHD1Q6ZMT9 781 aa11.96□□□□□ -0.49
PGK1-201ENST00000373316 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.96□□□□□ -0.49
PGK1-201ENST00000373316 LEO1Q8WVC0 666 aaPredicted RBP11.96□□□□□ -0.49
PGK1-201ENST00000373316 MRFAP1L1Q96HT8 127 aa11.96□□□□□ -0.49
PGK1-201ENST00000373316 SETDB2Q96T68 719 aa11.96□□□□□ -0.49
PGK1-201ENST00000373316 EYA3Q99504 573 aa11.96□□□□□ -0.49
PGK1-201ENST00000373316 CCDC77Q9BR77 488 aa11.96□□□□□ -0.49
PGK1-201ENST00000373316 SEPT11Q9NVA2 429 aaKnown RBP11.96□□□□□ -0.49
PGK1-201ENST00000373316 TOGARAM1Q9Y4F4 1720 aa11.96□□□□□ -0.49
PGK1-201ENST00000373316 SNAP23O00161 211 aa11.96□□□□□ -0.49
PGK1-201ENST00000373316 PFKFB2O60825 505 aa11.96□□□□□ -0.49
PGK1-201ENST00000373316 KRT13P13646 458 aa11.96□□□□□ -0.49
PGK1-201ENST00000373316 RBM26Q5T8P6 1007 aaKnown RBP11.96□□□□□ -0.49
PGK1-201ENST00000373316 DZIP3Q86Y13 1208 aaKnown RBP11.96□□□□□ -0.49
PGK1-201ENST00000373316 GTF3C6Q969F1 213 aa11.96□□□□□ -0.49
PGK1-201ENST00000373316 PNMA2Q9UL42 364 aa11.96□□□□□ -0.49
PGK1-201ENST00000373316 SPATA31A5Q5VU36 1347 aa11.96□□□□□ -0.49
PGK1-201ENST00000373316 SPATA31A7Q8IWB4 1347 aa11.96□□□□□ -0.49
PGK1-201ENST00000373316 ATP8B1O43520 1251 aa11.96□□□□□ -0.5
PGK1-201ENST00000373316 CD2BP2O95400 341 aaKnown RBP11.96□□□□□ -0.5
PGK1-201ENST00000373316 VAV2P52735 878 aa11.96□□□□□ -0.5
PGK1-201ENST00000373316 TNNC1P63316 161 aa11.96□□□□□ -0.5
PGK1-201ENST00000373316 RBM6P78332 1123 aaKnown RBP11.96□□□□□ -0.5
PGK1-201ENST00000373316 PDE4CQ08493 712 aa11.96□□□□□ -0.5
PGK1-201ENST00000373316 NKX1-1Q15270 411 aaPredicted RBP11.96□□□□□ -0.5
PGK1-201ENST00000373316 ADALQ6DHV7 355 aa11.96□□□□□ -0.5
PGK1-201ENST00000373316 CYP26C1Q6V0L0 522 aa11.96□□□□□ -0.5
PGK1-201ENST00000373316 TTC6Q86TZ1 520 aa11.96□□□□□ -0.5
PGK1-201ENST00000373316 AMIGO3Q86WK7 504 aa11.96□□□□□ -0.5
PGK1-201ENST00000373316 FSD2A1L4K1 749 aa11.95□□□□□ -0.5
PGK1-201ENST00000373316 SLC51AQ86UW1 340 aa11.95□□□□□ -0.5
PGK1-201ENST00000373316 PUS3Q9BZE2 481 aaKnown RBP11.95□□□□□ -0.5
PGK1-201ENST00000373316 SH2D4AQ9H788 454 aa11.95□□□□□ -0.5
PGK1-201ENST00000373316 TRMT1Q9NXH9 659 aaKnown RBP11.95□□□□□ -0.5
PGK1-201ENST00000373316 NBPF5PQ86XG9 351 aaPredicted RBP11.95□□□□□ -0.5
PGK1-201ENST00000373316 COPRSQ9NQ92 184 aa11.95□□□□□ -0.5
PGK1-201ENST00000373316 LUC7L2Q9Y383 392 aaKnown RBP11.95□□□□□ -0.5
PGK1-201ENST00000373316 SIPA1L3O60292 1781 aaPredicted RBP11.95□□□□□ -0.5
PGK1-201ENST00000373316 BAG1Q99933 345 aaPredicted RBP11.95□□□□□ -0.5
PGK1-201ENST00000373316 LARP6Q9BRS8 491 aaKnown RBP11.95□□□□□ -0.5
PGK1-201ENST00000373316 RBSNQ9H1K0 784 aa11.95□□□□□ -0.5
PGK1-201ENST00000373316 DNAI1Q9UI46 699 aa11.95□□□□□ -0.5
PGK1-201ENST00000373316 LRP6O75581 1613 aa11.95□□□□□ -0.5
PGK1-201ENST00000373316 KRT25Q7Z3Z0 450 aa11.95□□□□□ -0.5
PGK1-201ENST00000373316 JAKMIP2Q96AA8 810 aa11.95□□□□□ -0.5
PGK1-201ENST00000373316 HDAC9Q9UKV0 1011 aa11.95□□□□□ -0.5
PGK1-201ENST00000373316 SHANK3Q9BYB0 1731 aa11.94□□□□□ -0.5
PGK1-201ENST00000373316 SASH1O94885 1247 aa11.94□□□□□ -0.5
PGK1-201ENST00000373316 APOBRQ0VD83 1088 aa11.94□□□□□ -0.5
PGK1-201ENST00000373316 TMEM87AQ8NBN3 555 aa11.94□□□□□ -0.5
PGK1-201ENST00000373316 DYDC1Q8WWB3 177 aa11.94□□□□□ -0.5
PGK1-201ENST00000373316 PRM3Q9NNZ6 103 aa11.94□□□□□ -0.5
PGK1-201ENST00000373316 CBX1P83916 185 aa11.94□□□□□ -0.5
PGK1-201ENST00000373316 SH3TC1Q8TE82 1336 aa11.94□□□□□ -0.5
PGK1-201ENST00000373316 ANKRD62A6NC57 917 aa11.94□□□□□ -0.5
PGK1-201ENST00000373316 BIN1O00499 593 aa11.94□□□□□ -0.5
PGK1-201ENST00000373316 HAND2P61296 217 aa11.94□□□□□ -0.5
PGK1-201ENST00000373316 LRRC24Q50LG9 513 aa11.94□□□□□ -0.5
PGK1-201ENST00000373316 NBPF11Q86T75 865 aa11.94□□□□□ -0.5
PGK1-201ENST00000373316 NEK11Q8NG66 645 aa11.94□□□□□ -0.5
PGK1-201ENST00000373316 SEMA3EO15041 775 aa11.94□□□□□ -0.5
PGK1-201ENST00000373316 CCDC65Q8IXS2 484 aa11.94□□□□□ -0.5
PGK1-201ENST00000373316 CCDC42Q96M95 316 aa11.94□□□□□ -0.5
PGK1-201ENST00000373316 HAUS7Q99871 368 aa11.94□□□□□ -0.5
PGK1-201ENST00000373316 AFF2P51816 1311 aa11.93□□□□□ -0.5
PGK1-201ENST00000373316 A0A1B0GUL7 405 aa11.93□□□□□ -0.5
PGK1-201ENST00000373316 DKC1O60832 514 aaKnown RBP eCLIP11.93□□□□□ -0.53e-24■■■□□ 16.9
PGK1-201ENST00000373316 GNA14O95837 355 aa11.93□□□□□ -0.5
PGK1-201ENST00000373316 NAPAP54920 295 aa11.93□□□□□ -0.5
PGK1-201ENST00000373316 PPP2R5EQ16537 467 aa11.93□□□□□ -0.5
PGK1-201ENST00000373316 KIAA0753Q2KHM9 967 aa11.93□□□□□ -0.5
PGK1-201ENST00000373316 CCDC129Q6ZRS4 1044 aa11.93□□□□□ -0.5
PGK1-201ENST00000373316 CLEC17AQ6ZS10 378 aa11.93□□□□□ -0.5
PGK1-201ENST00000373316 WDR66Q8TBY9 1149 aa11.93□□□□□ -0.5
PGK1-201ENST00000373316 JADE2Q9NQC1 790 aa11.93□□□□□ -0.5
PGK1-201ENST00000373316 RFC4P35249 363 aa11.93□□□□□ -0.5
PGK1-201ENST00000373316 EAF2Q96CJ1 260 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms