RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 ZYXQ15942 572 aaKnown RBP11.04□□□□□ -0.64
TRERF1-204ENST00000372922 KRBA2Q6ZNG9 492 aa11.04□□□□□ -0.64
TRERF1-204ENST00000372922 IFNKQ9P0W0 207 aa11.04□□□□□ -0.64
TRERF1-204ENST00000372922 TBC1D22AQ8WUA7 517 aa11.04□□□□□ -0.64
TRERF1-204ENST00000372922 IFT81Q8WYA0 676 aa11.04□□□□□ -0.64
TRERF1-204ENST00000372922 LPIN2Q92539 896 aa11.04□□□□□ -0.64
TRERF1-204ENST00000372922 NACA2Q9H009 215 aa11.04□□□□□ -0.64
TRERF1-204ENST00000372922 BIVM-ERCC5R4GMW8 1640 aa11.04□□□□□ -0.64
TRERF1-204ENST00000372922 AKR1B15C9JRZ8 316 aaPredicted RBP11.03□□□□□ -0.64
TRERF1-204ENST00000372922 ADCY7P51828 1080 aa11.03□□□□□ -0.64
TRERF1-204ENST00000372922 PIK3AP1Q6ZUJ8 805 aa11.03□□□□□ -0.64
TRERF1-204ENST00000372922 AATFQ9NY61 560 aaKnown RBP eCLIP11.03□□□□□ -0.64
TRERF1-204ENST00000372922 KCNG1Q9UIX4 513 aa11.03□□□□□ -0.64
TRERF1-204ENST00000372922 NCAPH2Q6IBW4 605 aa11.03□□□□□ -0.64
TRERF1-204ENST00000372922 KRT222Q8N1A0 295 aa11.03□□□□□ -0.64
TRERF1-204ENST00000372922 LLPHQ9BRT6 129 aaKnown RBP11.03□□□□□ -0.64
TRERF1-204ENST00000372922 KCNK9Q9NPC2 374 aa11.03□□□□□ -0.64
TRERF1-204ENST00000372922 SBNO1A3KN83 1393 aa11.03□□□□□ -0.64
TRERF1-204ENST00000372922 MAP3K19Q56UN5 1328 aa11.03□□□□□ -0.64
TRERF1-204ENST00000372922 H7C1D1 291 aa11.03□□□□□ -0.64
TRERF1-204ENST00000372922 TUBBP07437 444 aa11.03□□□□□ -0.64
TRERF1-204ENST00000372922 TPD52P55327 224 aaPredicted RBP11.03□□□□□ -0.64
TRERF1-204ENST00000372922 PPP2R5BQ15173 497 aa11.03□□□□□ -0.64
TRERF1-204ENST00000372922 ARHGEF10O15013 1369 aa11.03□□□□□ -0.64
TRERF1-204ENST00000372922 FAM160A1Q05DH4 1040 aa11.03□□□□□ -0.64
TRERF1-204ENST00000372922 KMT5BQ4FZB7 885 aa11.03□□□□□ -0.64
TRERF1-204ENST00000372922 KRT25Q7Z3Z0 450 aa11.03□□□□□ -0.64
TRERF1-204ENST00000372922 TSPYL6Q8N831 410 aa11.03□□□□□ -0.64
TRERF1-204ENST00000372922 CETN3O15182 167 aa11.03□□□□□ -0.64
TRERF1-204ENST00000372922 TIMM10P62072 90 aa11.03□□□□□ -0.64
TRERF1-204ENST00000372922 ASIC2Q16515 512 aa11.03□□□□□ -0.64
TRERF1-204ENST00000372922 CCDC125Q86Z20 511 aa11.03□□□□□ -0.64
TRERF1-204ENST00000372922 ZNF830Q96NB3 372 aaPredicted RBP11.03□□□□□ -0.64
TRERF1-204ENST00000372922 SPC25Q9HBM1 224 aa11.03□□□□□ -0.64
TRERF1-204ENST00000372922 ANGEL1Q9UNK9 670 aaKnown RBP11.03□□□□□ -0.64
TRERF1-204ENST00000372922 MYL5Q02045 173 aa11.03□□□□□ -0.64
TRERF1-204ENST00000372922 PLEKHM2Q8IWE5 1019 aa11.03□□□□□ -0.64
TRERF1-204ENST00000372922 GBP7Q8N8V2 638 aaPredicted RBP11.03□□□□□ -0.64
TRERF1-204ENST00000372922 NSMCE1Q8WV22 266 aa11.03□□□□□ -0.64
TRERF1-204ENST00000372922 LZTFL1Q9NQ48 299 aa11.03□□□□□ -0.64
TRERF1-204ENST00000372922 KARSQ15046 597 aaKnown RBP11.02□□□□□ -0.64
TRERF1-204ENST00000372922 FAM98CQ17RN3 349 aaKnown RBP11.02□□□□□ -0.64
TRERF1-204ENST00000372922 ARFGAP2Q8N6H7 521 aa11.02□□□□□ -0.64
TRERF1-204ENST00000372922 MRFAP1L1Q96HT8 127 aa11.02□□□□□ -0.64
TRERF1-204ENST00000372922 SLC52A2Q9HAB3 445 aa11.02□□□□□ -0.64
TRERF1-204ENST00000372922 DNM3Q9UQ16 869 aa11.02□□□□□ -0.64
TRERF1-204ENST00000372922 GINS2Q9Y248 185 aa11.02□□□□□ -0.64
TRERF1-204ENST00000372922 UGGT2Q9NYU1 1516 aa11.02□□□□□ -0.64
TRERF1-204ENST00000372922 A0A1W2PP64 1363 aa11.02□□□□□ -0.64
TRERF1-204ENST00000372922 SMIM23A6NLE4 172 aa11.02□□□□□ -0.64
TRERF1-204ENST00000372922 NOL3O60936 208 aaKnown RBP11.02□□□□□ -0.64
TRERF1-204ENST00000372922 DLGAP5Q15398 846 aa11.02□□□□□ -0.64
TRERF1-204ENST00000372922 UBL4BQ8N7F7 174 aa11.02□□□□□ -0.64
TRERF1-204ENST00000372922 AS3MTQ9HBK9 375 aa11.02□□□□□ -0.64
TRERF1-204ENST00000372922 MKRN1Q9UHC7 482 aaKnown RBP11.02□□□□□ -0.64
TRERF1-204ENST00000372922 TTC36A6NLP5 189 aa11.02□□□□□ -0.65
TRERF1-204ENST00000372922 TXKP42681 527 aa11.02□□□□□ -0.65
TRERF1-204ENST00000372922 BAG6P46379 1132 aa11.02□□□□□ -0.65
TRERF1-204ENST00000372922 TBC1D8BQ0IIM8 1120 aa11.02□□□□□ -0.65
TRERF1-204ENST00000372922 IBTKQ9P2D0 1353 aaPredicted RBP11.02□□□□□ -0.65
TRERF1-204ENST00000372922 GEN1Q17RS7 908 aa11.02□□□□□ -0.65
TRERF1-204ENST00000372922 CCDC122Q5T0U0 273 aa11.02□□□□□ -0.65
TRERF1-204ENST00000372922 CCDC110Q8TBZ0 833 aa11.02□□□□□ -0.65
TRERF1-204ENST00000372922 V9GY48 417 aaPredicted RBP11.02□□□□□ -0.65
TRERF1-204ENST00000372922 USP21Q9UK80 565 aa11.02□□□□□ -0.65
TRERF1-204ENST00000372922 SPOUT1Q5T280 376 aaKnown RBP11.01□□□□□ -0.65
TRERF1-204ENST00000372922 CCDC121Q6ZUS5 278 aa11.01□□□□□ -0.65
TRERF1-204ENST00000372922 LCA5Q86VQ0 697 aa11.01□□□□□ -0.65
TRERF1-204ENST00000372922 LRRC43Q8N309 656 aa11.01□□□□□ -0.65
TRERF1-204ENST00000372922 CTTNBP2Q8WZ74 1663 aa11.01□□□□□ -0.65
TRERF1-204ENST00000372922 ZBTB24O43167 697 aaPredicted RBP11.01□□□□□ -0.65
TRERF1-204ENST00000372922 GPAA1O43292 621 aa11.01□□□□□ -0.65
TRERF1-204ENST00000372922 APBA3O96018 575 aa11.01□□□□□ -0.65
TRERF1-204ENST00000372922 SETDB1Q15047 1291 aa11.01□□□□□ -0.65
TRERF1-204ENST00000372922 AP1ARQ63HQ0 302 aa11.01□□□□□ -0.65
TRERF1-204ENST00000372922 PPP1R21Q6ZMI0 780 aa11.01□□□□□ -0.65
TRERF1-204ENST00000372922 TBC1D31Q96DN5 1066 aa11.01□□□□□ -0.65
TRERF1-204ENST00000372922 CLUL1Q15846 466 aa11.01□□□□□ -0.65
TRERF1-204ENST00000372922 DDX39AO00148 427 aaKnown RBP11.01□□□□□ -0.65
TRERF1-204ENST00000372922 PRIM1P49642 420 aaKnown RBP11.01□□□□□ -0.65
TRERF1-204ENST00000372922 NONOQ15233 471 aaKnown RBP eCLIP11.01□□□□□ -0.65
TRERF1-204ENST00000372922 CSADQ9Y600 493 aa11.01□□□□□ -0.65
TRERF1-204ENST00000372922 TLDC2A0PJX2 215 aa11.01□□□□□ -0.65
TRERF1-204ENST00000372922 GABPAQ06546 454 aa11.01□□□□□ -0.65
TRERF1-204ENST00000372922 BIRC2Q13490 618 aa11.01□□□□□ -0.65
TRERF1-204ENST00000372922 ERCC6LQ2NKX8 1250 aa11.01□□□□□ -0.65
TRERF1-204ENST00000372922 CPLX4Q7Z7G2 160 aa11.01□□□□□ -0.65
TRERF1-204ENST00000372922 SMCR8Q8TEV9 937 aaPredicted RBP11.01□□□□□ -0.65
TRERF1-204ENST00000372922 SEC62Q99442 399 aaKnown RBP11.01□□□□□ -0.65
TRERF1-204ENST00000372922 NUP58Q9BVL2 599 aa11.01□□□□□ -0.65
TRERF1-204ENST00000372922 SLC27A2O14975 620 aa11.01□□□□□ -0.65
TRERF1-204ENST00000372922 TNFAIP1Q13829 316 aa11.01□□□□□ -0.65
TRERF1-204ENST00000372922 KRT24Q2M2I5 525 aa11.01□□□□□ -0.65
TRERF1-204ENST00000372922 TTC38Q5R3I4 469 aa11.01□□□□□ -0.65
TRERF1-204ENST00000372922 CPXCR1Q8N123 301 aa11.01□□□□□ -0.65
TRERF1-204ENST00000372922 UBLCP1Q8WVY7 318 aaPredicted RBP11.01□□□□□ -0.65
TRERF1-204ENST00000372922 PHACTR3Q96KR7 559 aa11.01□□□□□ -0.65
TRERF1-204ENST00000372922 BAG1Q99933 345 aaPredicted RBP11.01□□□□□ -0.65
TRERF1-204ENST00000372922 ZBTB40Q9NUA8 1239 aa11.01□□□□□ -0.65
TRERF1-204ENST00000372922 NKIRAS1Q9NYS0 192 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms