RNA–Protein interactions for RNA: ENST00000372422.6

YIPF3-202, Transcript of Yip1 domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YIPF3, Length 1,576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-202ENST00000372422 UTRNP46939 3433 aa17.75■□□□□ 0.43
YIPF3-202ENST00000372422 ATRNL1Q5VV63 1379 aa17.75■□□□□ 0.43
YIPF3-202ENST00000372422 PLCD1P51178 756 aa17.74■□□□□ 0.43
YIPF3-202ENST00000372422 USP50Q70EL3 339 aaPredicted RBP17.74■□□□□ 0.43
YIPF3-202ENST00000372422 DHX32Q7L7V1 743 aaKnown RBP17.74■□□□□ 0.43
YIPF3-202ENST00000372422 ESR2Q92731 530 aa17.74■□□□□ 0.43
YIPF3-202ENST00000372422 TRIM34Q9BYJ4 488 aa17.74■□□□□ 0.43
YIPF3-202ENST00000372422 EHD4Q9H223 541 aa17.74■□□□□ 0.43
YIPF3-202ENST00000372422 SERPINB13Q9UIV8 391 aa17.74■□□□□ 0.43
YIPF3-202ENST00000372422 MYH1P12882 1939 aa17.74■□□□□ 0.43
YIPF3-202ENST00000372422 FGRP09769 529 aa17.74■□□□□ 0.43
YIPF3-202ENST00000372422 RPS6KB1P23443 525 aa17.74■□□□□ 0.43
YIPF3-202ENST00000372422 MCM5P33992 734 aa17.74■□□□□ 0.43
YIPF3-202ENST00000372422 EPHX2P34913 555 aa17.74■□□□□ 0.43
YIPF3-202ENST00000372422 RRP12Q5JTH9 1297 aaKnown RBP17.74■□□□□ 0.43
YIPF3-202ENST00000372422 STK11IPQ8N1F8 1099 aa17.74■□□□□ 0.43
YIPF3-202ENST00000372422 CRACR2BQ8N4Y2 399 aaPredicted RBP17.74■□□□□ 0.43
YIPF3-202ENST00000372422 MKNK2Q9HBH9 465 aa17.74■□□□□ 0.43
YIPF3-202ENST00000372422 PDRG1Q9NUG6 133 aa17.74■□□□□ 0.43
YIPF3-202ENST00000372422 SWAP70Q9UH65 585 aa17.74■□□□□ 0.43
YIPF3-202ENST00000372422 NEDD4P46934 1319 aa17.73■□□□□ 0.43
YIPF3-202ENST00000372422 ORC4O43929 436 aa17.73■□□□□ 0.43
YIPF3-202ENST00000372422 FGD1P98174 961 aa17.73■□□□□ 0.43
YIPF3-202ENST00000372422 BECN1Q14457 450 aa17.73■□□□□ 0.43
YIPF3-202ENST00000372422 NBR1Q14596 966 aa17.73■□□□□ 0.43
YIPF3-202ENST00000372422 ANGEL2Q5VTE6 544 aaKnown RBP17.73■□□□□ 0.43
YIPF3-202ENST00000372422 C16orf86Q6ZW13 317 aa17.73■□□□□ 0.43
YIPF3-202ENST00000372422 FOXP4Q8IVH2 680 aaPredicted RBP17.73■□□□□ 0.43
YIPF3-202ENST00000372422 ZFPM1Q8IX07 1006 aa17.73■□□□□ 0.43
YIPF3-202ENST00000372422 WDR19Q8NEZ3 1342 aa17.72■□□□□ 0.43
YIPF3-202ENST00000372422 PITPNM2Q9BZ72 1349 aa17.72■□□□□ 0.43
YIPF3-202ENST00000372422 DDTLA6NHG4 134 aaPredicted RBP17.72■□□□□ 0.43
YIPF3-202ENST00000372422 B4E1Z4 1266 aa17.72■□□□□ 0.43
YIPF3-202ENST00000372422 MCM2P49736 904 aa17.72■□□□□ 0.43
YIPF3-202ENST00000372422 ANKRD1Q15327 319 aa17.72■□□□□ 0.43
YIPF3-202ENST00000372422 PNMA8AQ86V59 439 aaPredicted RBP17.72■□□□□ 0.43
YIPF3-202ENST00000372422 CSRNP1Q96S65 589 aa17.72■□□□□ 0.43
YIPF3-202ENST00000372422 GGA3Q9NZ52 723 aa17.72■□□□□ 0.43
YIPF3-202ENST00000372422 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.72■□□□□ 0.43
YIPF3-202ENST00000372422 CNTNAP1P78357 1384 aa17.72■□□□□ 0.43
YIPF3-202ENST00000372422 SCN4AP35499 1836 aa17.71■□□□□ 0.43
YIPF3-202ENST00000372422 HIRAP54198 1017 aaPredicted RBP17.71■□□□□ 0.43
YIPF3-202ENST00000372422 RASA3Q14644 834 aa17.71■□□□□ 0.43
YIPF3-202ENST00000372422 SART3Q15020 963 aaKnown RBP17.71■□□□□ 0.43
YIPF3-202ENST00000372422 MB21D2Q8IYB1 491 aaPredicted RBP17.71■□□□□ 0.43
YIPF3-202ENST00000372422 ZNF444Q8N0Y2 327 aaPredicted RBP17.71■□□□□ 0.43
YIPF3-202ENST00000372422 DYNLL2Q96FJ2 89 aa17.71■□□□□ 0.43
YIPF3-202ENST00000372422 PPP2R3BQ9Y5P8 575 aa17.71■□□□□ 0.43
YIPF3-202ENST00000372422 WDR90Q96KV7 1748 aa17.71■□□□□ 0.42
YIPF3-202ENST00000372422 RANBP6O60518 1105 aaKnown RBP17.7■□□□□ 0.42
YIPF3-202ENST00000372422 KDM4AO75164 1064 aa17.7■□□□□ 0.42
YIPF3-202ENST00000372422 CPA1P15085 419 aa17.7■□□□□ 0.42
YIPF3-202ENST00000372422 CDK8P49336 464 aa17.7■□□□□ 0.42
YIPF3-202ENST00000372422 HSCBQ8IWL3 235 aa17.7■□□□□ 0.42
YIPF3-202ENST00000372422 ZC3H15Q8WU90 426 aaKnown RBP17.7■□□□□ 0.42
YIPF3-202ENST00000372422 SNX21Q969T3 373 aa17.7■□□□□ 0.42
YIPF3-202ENST00000372422 DCPSQ96C86 337 aaKnown RBP17.7■□□□□ 0.42
YIPF3-202ENST00000372422 HOOK2Q96ED9 719 aa17.7■□□□□ 0.42
YIPF3-202ENST00000372422 TMEM39BQ9GZU3 492 aa17.7■□□□□ 0.42
YIPF3-202ENST00000372422 TAF1DQ9H5J8 278 aaPredicted RBP17.7■□□□□ 0.42
YIPF3-202ENST00000372422 HERC5Q9UII4 1024 aaKnown RBP17.7■□□□□ 0.42
YIPF3-202ENST00000372422 TSPY2A6NKD2 308 aa17.7■□□□□ 0.42
YIPF3-202ENST00000372422 SMIM22K7EJ46 135 aa17.7■□□□□ 0.42
YIPF3-202ENST00000372422 PRC1O43663 620 aa17.7■□□□□ 0.42
YIPF3-202ENST00000372422 PRDM1O75626 825 aa17.7■□□□□ 0.42
YIPF3-202ENST00000372422 EVX2Q03828 476 aa17.7■□□□□ 0.42
YIPF3-202ENST00000372422 GABPAQ06546 454 aa17.7■□□□□ 0.42
YIPF3-202ENST00000372422 SH3BP5LQ7L8J4 393 aa17.7■□□□□ 0.42
YIPF3-202ENST00000372422 IQCA1Q86XH1 822 aa17.7■□□□□ 0.42
YIPF3-202ENST00000372422 TMEM87BQ96K49 555 aa17.7■□□□□ 0.42
YIPF3-202ENST00000372422 MTA3Q9BTC8 594 aa17.7■□□□□ 0.42
YIPF3-202ENST00000372422 DEFB129Q9H1M3 183 aa17.7■□□□□ 0.42
YIPF3-202ENST00000372422 ALDH8A1Q9H2A2 487 aaPredicted RBP17.7■□□□□ 0.42
YIPF3-202ENST00000372422 INCENPQ9NQS7 918 aa17.7■□□□□ 0.42
YIPF3-202ENST00000372422 ASTN2O75129 1339 aaPredicted RBP17.69■□□□□ 0.42
YIPF3-202ENST00000372422 ERICH2A1L162 156 aa17.69■□□□□ 0.42
YIPF3-202ENST00000372422 EXOSC10Q01780 885 aaKnown RBP17.69■□□□□ 0.42
YIPF3-202ENST00000372422 TTC14Q96N46 770 aa17.69■□□□□ 0.42
YIPF3-202ENST00000372422 UBAC1Q9BSL1 405 aa17.69■□□□□ 0.42
YIPF3-202ENST00000372422 ZSWIM5Q9P217 1185 aa17.69■□□□□ 0.42
YIPF3-202ENST00000372422 TSPY3P0CV98 308 aa17.68■□□□□ 0.42
YIPF3-202ENST00000372422 TSPY8P0CW00 308 aa17.68■□□□□ 0.42
YIPF3-202ENST00000372422 VEGFAP15692 232 aaPredicted RBP17.68■□□□□ 0.42
YIPF3-202ENST00000372422 METTL16Q86W50 562 aaKnown RBP17.68■□□□□ 0.42
YIPF3-202ENST00000372422 SULF1Q8IWU6 871 aa17.68■□□□□ 0.42
YIPF3-202ENST00000372422 SLC44A5Q8NCS7 719 aa17.68■□□□□ 0.42
YIPF3-202ENST00000372422 TACC3Q9Y6A5 838 aa17.68■□□□□ 0.42
YIPF3-202ENST00000372422 AK2P54819 239 aa17.67■□□□□ 0.42
YIPF3-202ENST00000372422 EAPPQ56P03 285 aaPredicted RBP17.67■□□□□ 0.42
YIPF3-202ENST00000372422 CCDC178Q5BJE1 867 aa17.67■□□□□ 0.42
YIPF3-202ENST00000372422 Q6ZUG5 572 aa17.67■□□□□ 0.42
YIPF3-202ENST00000372422 CHST3Q7LGC8 479 aa17.67■□□□□ 0.42
YIPF3-202ENST00000372422 FBXL16Q8N461 479 aa17.67■□□□□ 0.42
YIPF3-202ENST00000372422 CCDC17Q96LX7 622 aa17.67■□□□□ 0.42
YIPF3-202ENST00000372422 TCEANC2Q96MN5 208 aa17.67■□□□□ 0.42
YIPF3-202ENST00000372422 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.67■□□□□ 0.42
YIPF3-202ENST00000372422 IFIT3O14879 490 aaKnown RBP17.66■□□□□ 0.42
YIPF3-202ENST00000372422 TBC1D12O60347 775 aa17.66■□□□□ 0.42
YIPF3-202ENST00000372422 RASA1P20936 1047 aa17.66■□□□□ 0.42
YIPF3-202ENST00000372422 TFAP4Q01664 338 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms