RNA–Protein interactions for RNA: ENST00000372317.7

CALCOCO2-202, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 462 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-202ENST00000372317 NKX2-3Q8TAU0 364 aa13.64□□□□□ -0.23
CALCOCO2-202ENST00000372317 TCEANC2Q96MN5 208 aa13.64□□□□□ -0.23
CALCOCO2-202ENST00000372317 RNF41Q9H4P4 317 aaPredicted RBP13.64□□□□□ -0.23
CALCOCO2-202ENST00000372317 ZSWIM6Q9HCJ5 1215 aa13.64□□□□□ -0.23
CALCOCO2-202ENST00000372317 INCENPQ9NQS7 918 aa13.64□□□□□ -0.23
CALCOCO2-202ENST00000372317 TOMM22Q9NS69 142 aa13.64□□□□□ -0.23
CALCOCO2-202ENST00000372317 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.64□□□□□ -0.23
CALCOCO2-202ENST00000372317 UTRNP46939 3433 aa13.63□□□□□ -0.23
CALCOCO2-202ENST00000372317 DDTLA6NHG4 134 aaPredicted RBP13.63□□□□□ -0.23
CALCOCO2-202ENST00000372317 PRDM1O75626 825 aa13.63□□□□□ -0.23
CALCOCO2-202ENST00000372317 RPS6KB1P23443 525 aa13.63□□□□□ -0.23
CALCOCO2-202ENST00000372317 EPHX2P34913 555 aa13.63□□□□□ -0.23
CALCOCO2-202ENST00000372317 TRDNQ13061 729 aa13.63□□□□□ -0.23
CALCOCO2-202ENST00000372317 TNFAIP1Q13829 316 aa13.63□□□□□ -0.23
CALCOCO2-202ENST00000372317 ANGEL2Q5VTE6 544 aaKnown RBP13.63□□□□□ -0.23
CALCOCO2-202ENST00000372317 MFSD6Q6ZSS7 791 aa13.63□□□□□ -0.23
CALCOCO2-202ENST00000372317 TTC6Q86TZ1 520 aa13.63□□□□□ -0.23
CALCOCO2-202ENST00000372317 APOBEC3FQ8IUX4 373 aaKnown RBP13.63□□□□□ -0.23
CALCOCO2-202ENST00000372317 CDAN1Q8IWY9 1227 aa13.63□□□□□ -0.23
CALCOCO2-202ENST00000372317 NCOA7Q8NI08 942 aa13.63□□□□□ -0.23
CALCOCO2-202ENST00000372317 SCAF8Q9UPN6 1271 aaKnown RBP13.63□□□□□ -0.23
CALCOCO2-202ENST00000372317 CYP46A1Q9Y6A2 500 aa13.63□□□□□ -0.23
CALCOCO2-202ENST00000372317 SCN4AP35499 1836 aa13.62□□□□□ -0.23
CALCOCO2-202ENST00000372317 IQCA1LA6NCM1 817 aa13.62□□□□□ -0.23
CALCOCO2-202ENST00000372317 ORC4O43929 436 aa13.62□□□□□ -0.23
CALCOCO2-202ENST00000372317 CD2BP2O95400 341 aaKnown RBP13.62□□□□□ -0.23
CALCOCO2-202ENST00000372317 PCP11498 1178 aaKnown RBP13.62□□□□□ -0.23
CALCOCO2-202ENST00000372317 TNNI2P48788 182 aa13.62□□□□□ -0.23
CALCOCO2-202ENST00000372317 NEK4P51957 841 aa13.62□□□□□ -0.23
CALCOCO2-202ENST00000372317 PDE4BQ07343 736 aa13.62□□□□□ -0.23
CALCOCO2-202ENST00000372317 C16orf86Q6ZW13 317 aa13.62□□□□□ -0.23
CALCOCO2-202ENST00000372317 RUFY3Q7L099 469 aa13.62□□□□□ -0.23
CALCOCO2-202ENST00000372317 FAM83AQ86UY5 434 aa13.62□□□□□ -0.23
CALCOCO2-202ENST00000372317 FAM151AQ8WW52 585 aa13.62□□□□□ -0.23
CALCOCO2-202ENST00000372317 CSRNP1Q96S65 589 aa13.62□□□□□ -0.23
CALCOCO2-202ENST00000372317 KRT23Q9C075 422 aa13.62□□□□□ -0.23
CALCOCO2-202ENST00000372317 TMEM39BQ9GZU3 492 aa13.62□□□□□ -0.23
CALCOCO2-202ENST00000372317 EHD4Q9H223 541 aa13.62□□□□□ -0.23
CALCOCO2-202ENST00000372317 DHX36Q9H2U1 1008 aaKnown RBP13.62□□□□□ -0.23
CALCOCO2-202ENST00000372317 CNNM2Q9H8M5 875 aa13.62□□□□□ -0.23
CALCOCO2-202ENST00000372317 SERPINB13Q9UIV8 391 aa13.62□□□□□ -0.23
CALCOCO2-202ENST00000372317 FAM196BA6NMK8 535 aa13.61□□□□□ -0.23
CALCOCO2-202ENST00000372317 ST18O60284 1047 aa13.61□□□□□ -0.23
CALCOCO2-202ENST00000372317 KDM4AO75164 1064 aa13.61□□□□□ -0.23
CALCOCO2-202ENST00000372317 HMGB1P09429 215 aaKnown RBP13.61□□□□□ -0.23
CALCOCO2-202ENST00000372317 FGRP09769 529 aa13.61□□□□□ -0.23
CALCOCO2-202ENST00000372317 SLURP2P0DP57 97 aa13.61□□□□□ -0.23
CALCOCO2-202ENST00000372317 ANTXR2P58335 489 aa13.61□□□□□ -0.23
CALCOCO2-202ENST00000372317 GABPAQ06546 454 aa13.61□□□□□ -0.23
CALCOCO2-202ENST00000372317 RASA3Q14644 834 aa13.61□□□□□ -0.23
CALCOCO2-202ENST00000372317 CYB5R4Q7L1T6 521 aa13.61□□□□□ -0.23
CALCOCO2-202ENST00000372317 CRACR2BQ8N4Y2 399 aaPredicted RBP13.61□□□□□ -0.23
CALCOCO2-202ENST00000372317 TTC14Q96N46 770 aa13.61□□□□□ -0.23
CALCOCO2-202ENST00000372317 TAF1DQ9H5J8 278 aaPredicted RBP13.61□□□□□ -0.23
CALCOCO2-202ENST00000372317 DNAJC18Q9H819 358 aa13.61□□□□□ -0.23
CALCOCO2-202ENST00000372317 PDRG1Q9NUG6 133 aa13.61□□□□□ -0.23
CALCOCO2-202ENST00000372317 PITPNM2Q9BZ72 1349 aa13.61□□□□□ -0.23
CALCOCO2-202ENST00000372317 POTECB2RU33 542 aa13.6□□□□□ -0.23
CALCOCO2-202ENST00000372317 PRC1O43663 620 aa13.6□□□□□ -0.23
CALCOCO2-202ENST00000372317 RANBP6O60518 1105 aaKnown RBP13.6□□□□□ -0.23
CALCOCO2-202ENST00000372317 MCM5P33992 734 aa13.6□□□□□ -0.23
CALCOCO2-202ENST00000372317 CDK8P49336 464 aa13.6□□□□□ -0.23
CALCOCO2-202ENST00000372317 USP50Q70EL3 339 aaPredicted RBP13.6□□□□□ -0.23
CALCOCO2-202ENST00000372317 NOL8Q76FK4 1167 aaKnown RBP13.6□□□□□ -0.23
CALCOCO2-202ENST00000372317 DHX32Q7L7V1 743 aaKnown RBP13.6□□□□□ -0.23
CALCOCO2-202ENST00000372317 CHST3Q7LGC8 479 aa13.6□□□□□ -0.23
CALCOCO2-202ENST00000372317 ESR2Q92731 530 aa13.6□□□□□ -0.23
CALCOCO2-202ENST00000372317 LRRC2Q9BYS8 371 aa13.6□□□□□ -0.23
CALCOCO2-202ENST00000372317 PI4KBQ9UBF8 816 aa13.6□□□□□ -0.23
CALCOCO2-202ENST00000372317 SSC5DA1L4H1 1573 aa13.59□□□□□ -0.23
CALCOCO2-202ENST00000372317 RASA1P20936 1047 aa13.59□□□□□ -0.23
CALCOCO2-202ENST00000372317 SHMT1P34896 483 aa13.59□□□□□ -0.23
CALCOCO2-202ENST00000372317 AK2P54819 239 aa13.59□□□□□ -0.23
CALCOCO2-202ENST00000372317 EAPPQ56P03 285 aaPredicted RBP13.59□□□□□ -0.23
CALCOCO2-202ENST00000372317 TEPSINQ96N21 525 aa13.59□□□□□ -0.23
CALCOCO2-202ENST00000372317 TRIM34Q9BYJ4 488 aa13.59□□□□□ -0.23
CALCOCO2-202ENST00000372317 DEFB129Q9H1M3 183 aa13.59□□□□□ -0.23
CALCOCO2-202ENST00000372317 MKNK2Q9HBH9 465 aa13.59□□□□□ -0.23
CALCOCO2-202ENST00000372317 ZNF287Q9HBT7 754 aa13.59□□□□□ -0.23
CALCOCO2-202ENST00000372317 SWAP70Q9UH65 585 aa13.59□□□□□ -0.23
CALCOCO2-202ENST00000372317 PGAP2Q9UHJ9 254 aa13.59□□□□□ -0.23
CALCOCO2-202ENST00000372317 WDR19Q8NEZ3 1342 aa13.59□□□□□ -0.23
CALCOCO2-202ENST00000372317 ADM5C9JUS6 153 aa13.58□□□□□ -0.24
CALCOCO2-202ENST00000372317 EXOSC10Q01780 885 aaKnown RBP13.58□□□□□ -0.24
CALCOCO2-202ENST00000372317 FAM47AQ5JRC9 791 aa13.58□□□□□ -0.24
CALCOCO2-202ENST00000372317 Q6ZUG5 572 aa13.58□□□□□ -0.24
CALCOCO2-202ENST00000372317 HSCBQ8IWL3 235 aa13.58□□□□□ -0.24
CALCOCO2-202ENST00000372317 ZNF526Q8TF50 670 aaPredicted RBP13.58□□□□□ -0.24
CALCOCO2-202ENST00000372317 SNX21Q969T3 373 aa13.58□□□□□ -0.24
CALCOCO2-202ENST00000372317 GPHNQ9NQX3 736 aaPredicted RBP13.58□□□□□ -0.24
CALCOCO2-202ENST00000372317 PPP2R3BQ9Y5P8 575 aa13.58□□□□□ -0.24
CALCOCO2-202ENST00000372317 PLIN4Q96Q06 1357 aa13.58□□□□□ -0.24
CALCOCO2-202ENST00000372317 TSPY2A6NKD2 308 aa13.57□□□□□ -0.24
CALCOCO2-202ENST00000372317 SH2B2O14492 632 aaPredicted RBP13.57□□□□□ -0.24
CALCOCO2-202ENST00000372317 FGD1P98174 961 aa13.57□□□□□ -0.24
CALCOCO2-202ENST00000372317 TOB2Q14106 344 aaPredicted RBP13.57□□□□□ -0.24
CALCOCO2-202ENST00000372317 METTL16Q86W50 562 aaKnown RBP13.57□□□□□ -0.24
CALCOCO2-202ENST00000372317 SULF1Q8IWU6 871 aa13.57□□□□□ -0.24
CALCOCO2-202ENST00000372317 DCPSQ96C86 337 aaKnown RBP13.57□□□□□ -0.24
CALCOCO2-202ENST00000372317 ZKSCAN3Q9BRR0 538 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms