RNA–Protein interactions for RNA: ENST00000372192.3

PTCH2-201, Transcript of patched 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTCH2, Length 4,225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-201ENST00000372192 LONRF3Q496Y0 759 aa12.93□□□□□ -0.34
PTCH2-201ENST00000372192 FAM114A1Q8IWE2 563 aa12.93□□□□□ -0.34
PTCH2-201ENST00000372192 HELBQ8NG08 1087 aaPredicted RBP12.93□□□□□ -0.34
PTCH2-201ENST00000372192 ENOX1Q8TC92 643 aaKnown RBP12.93□□□□□ -0.34
PTCH2-201ENST00000372192 AIFM3Q96NN9 605 aa12.93□□□□□ -0.34
PTCH2-201ENST00000372192 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.93□□□□□ -0.34
PTCH2-201ENST00000372192 KNDC1Q76NI1 1749 aa12.93□□□□□ -0.34
PTCH2-201ENST00000372192 CYP7A1P22680 504 aa12.93□□□□□ -0.34
PTCH2-201ENST00000372192 CCDC122Q5T0U0 273 aa12.93□□□□□ -0.34
PTCH2-201ENST00000372192 ALS2CR12Q96Q35 445 aa12.93□□□□□ -0.34
PTCH2-201ENST00000372192 CTDNEP1O95476 244 aa12.92□□□□□ -0.34
PTCH2-201ENST00000372192 ERCC5P28715 1186 aaPredicted RBP12.92□□□□□ -0.34
PTCH2-201ENST00000372192 ADORA1P30542 326 aa12.92□□□□□ -0.34
PTCH2-201ENST00000372192 SOGA3Q5TF21 947 aa12.92□□□□□ -0.34
PTCH2-201ENST00000372192 GOLGA5Q8TBA6 731 aa12.92□□□□□ -0.34
PTCH2-201ENST00000372192 CAPZA3Q96KX2 299 aa12.92□□□□□ -0.34
PTCH2-201ENST00000372192 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.92□□□□□ -0.34
PTCH2-201ENST00000372192 L2HGDHQ9H9P8 463 aa12.92□□□□□ -0.34
PTCH2-201ENST00000372192 SETD1BQ9UPS6 1966 aaKnown RBP12.92□□□□□ -0.34
PTCH2-201ENST00000372192 IRS4O14654 1257 aaPredicted RBP12.92□□□□□ -0.34
PTCH2-201ENST00000372192 KIF5BP33176 963 aa12.92□□□□□ -0.34
PTCH2-201ENST00000372192 SPATA1Q5VX52 437 aa12.92□□□□□ -0.34
PTCH2-201ENST00000372192 KAZALD1Q96I82 304 aa12.92□□□□□ -0.34
PTCH2-201ENST00000372192 ATG3Q9NT62 314 aa12.92□□□□□ -0.34
PTCH2-201ENST00000372192 VGLL3A8MV65 326 aa12.92□□□□□ -0.34
PTCH2-201ENST00000372192 KIF5AQ12840 1032 aa12.92□□□□□ -0.34
PTCH2-201ENST00000372192 ZNF174Q15697 407 aa12.92□□□□□ -0.34
PTCH2-201ENST00000372192 WHAMMP3Q1A5X7 153 aa12.92□□□□□ -0.34
PTCH2-201ENST00000372192 CAVIN4Q5BKX8 364 aa12.92□□□□□ -0.34
PTCH2-201ENST00000372192 TCP11L1Q9NUJ3 509 aa12.92□□□□□ -0.34
PTCH2-201ENST00000372192 CALM1P0DP23 149 aa12.91□□□□□ -0.34
PTCH2-201ENST00000372192 CALM2P0DP24 149 aa12.91□□□□□ -0.34
PTCH2-201ENST00000372192 CALM3P0DP25 149 aa12.91□□□□□ -0.34
PTCH2-201ENST00000372192 CTDSPL2Q05D32 466 aa12.91□□□□□ -0.34
PTCH2-201ENST00000372192 RABL6Q3YEC7 729 aaPredicted RBP12.91□□□□□ -0.34
PTCH2-201ENST00000372192 AKNAD1Q5T1N1 836 aa12.91□□□□□ -0.34
PTCH2-201ENST00000372192 CACNA2D4Q7Z3S7 1137 aa12.91□□□□□ -0.34
PTCH2-201ENST00000372192 FERMT2Q96AC1 680 aa12.91□□□□□ -0.34
PTCH2-201ENST00000372192 PUS7LQ9H0K6 701 aaKnown RBP12.91□□□□□ -0.34
PTCH2-201ENST00000372192 ST7Q9NRC1 585 aa12.91□□□□□ -0.34
PTCH2-201ENST00000372192 MAN1B1Q9UKM7 699 aa12.91□□□□□ -0.34
PTCH2-201ENST00000372192 SIGLEC1Q9BZZ2 1709 aa12.91□□□□□ -0.34
PTCH2-201ENST00000372192 ADAMTS13Q76LX8 1427 aa12.91□□□□□ -0.34
PTCH2-201ENST00000372192 CC2D1AQ6P1N0 951 aaPredicted RBP12.91□□□□□ -0.34
PTCH2-201ENST00000372192 CENPHQ9H3R5 247 aa12.91□□□□□ -0.34
PTCH2-201ENST00000372192 ARMT1Q9H993 441 aa12.91□□□□□ -0.34
PTCH2-201ENST00000372192 TMEM232C9JQI7 657 aa12.91□□□□□ -0.34
PTCH2-201ENST00000372192 H7C1W4 665 aa12.91□□□□□ -0.34
PTCH2-201ENST00000372192 TADA3O75528 432 aa12.91□□□□□ -0.34
PTCH2-201ENST00000372192 MATR3P43243 847 aaKnown RBP eCLIP12.91□□□□□ -0.34
PTCH2-201ENST00000372192 TCIRG1Q13488 830 aa12.91□□□□□ -0.34
PTCH2-201ENST00000372192 TTC31Q49AM3 519 aaPredicted RBP12.91□□□□□ -0.34
PTCH2-201ENST00000372192 MIGA1Q8NAN2 632 aa12.91□□□□□ -0.34
PTCH2-201ENST00000372192 AFAP1L1Q8TED9 768 aa12.91□□□□□ -0.34
PTCH2-201ENST00000372192 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.91□□□□□ -0.34
PTCH2-201ENST00000372192 EXOC4Q96A65 974 aa12.91□□□□□ -0.34
PTCH2-201ENST00000372192 SLF1Q9BQI6 1058 aa12.91□□□□□ -0.34
PTCH2-201ENST00000372192 PDE11AQ9HCR9 933 aa12.91□□□□□ -0.34
PTCH2-201ENST00000372192 PALLDQ8WX93 1383 aa12.91□□□□□ -0.34
PTCH2-201ENST00000372192 PCDH11XQ9BZA7 1347 aa12.9□□□□□ -0.34
PTCH2-201ENST00000372192 PCDH11YQ9BZA8 1340 aa12.9□□□□□ -0.34
PTCH2-201ENST00000372192 AKR1B10O60218 316 aa12.9□□□□□ -0.34
PTCH2-201ENST00000372192 FGFR1OPO95684 399 aaKnown RBP12.9□□□□□ -0.34
PTCH2-201ENST00000372192 PAK1Q13153 545 aa12.9□□□□□ -0.34
PTCH2-201ENST00000372192 CCDC96Q2M329 555 aa12.9□□□□□ -0.34
PTCH2-201ENST00000372192 RESP18Q5W5W9 173 aa12.9□□□□□ -0.34
PTCH2-201ENST00000372192 SPATA31D1Q6ZQQ2 1576 aa12.9□□□□□ -0.34
PTCH2-201ENST00000372192 ERBB3P21860 1342 aa12.9□□□□□ -0.34
PTCH2-201ENST00000372192 PPP2R5BQ15173 497 aa12.9□□□□□ -0.34
PTCH2-201ENST00000372192 MKRN1Q9UHC7 482 aaKnown RBP12.9□□□□□ -0.34
PTCH2-201ENST00000372192 TCHHQ07283 1943 aa12.9□□□□□ -0.34
PTCH2-201ENST00000372192 PATL2C9JE40 543 aaKnown RBP12.9□□□□□ -0.34
PTCH2-201ENST00000372192 TACC1O75410 805 aa12.9□□□□□ -0.34
PTCH2-201ENST00000372192 PDE6AP16499 860 aa12.9□□□□□ -0.34
PTCH2-201ENST00000372192 UBE3CQ15386 1083 aa12.9□□□□□ -0.34
PTCH2-201ENST00000372192 EBAG9O00559 213 aa12.89□□□□□ -0.35
PTCH2-201ENST00000372192 SH2B2O14492 632 aaPredicted RBP12.89□□□□□ -0.35
PTCH2-201ENST00000372192 WWC2Q6AWC2 1192 aa12.89□□□□□ -0.35
PTCH2-201ENST00000372192 MB21D2Q8IYB1 491 aaPredicted RBP12.89□□□□□ -0.35
PTCH2-201ENST00000372192 CCDC42Q96M95 316 aa12.89□□□□□ -0.35
PTCH2-201ENST00000372192 TAB2Q9NYJ8 693 aa12.89□□□□□ -0.35
PTCH2-201ENST00000372192 DLG5Q8TDM6 1919 aa12.89□□□□□ -0.35
PTCH2-201ENST00000372192 MCM7P33993 719 aa12.89□□□□□ -0.35
PTCH2-201ENST00000372192 GTF2A1P52655 376 aaPredicted RBP12.89□□□□□ -0.35
PTCH2-201ENST00000372192 AMPD3Q01432 767 aa12.89□□□□□ -0.35
PTCH2-201ENST00000372192 PUM3Q15397 648 aaKnown RBP12.89□□□□□ -0.35
PTCH2-201ENST00000372192 TAF4BQ92750 862 aa12.89□□□□□ -0.35
PTCH2-201ENST00000372192 SAMSN1Q9NSI8 373 aaKnown RBP12.89□□□□□ -0.35
PTCH2-201ENST00000372192 AGLP35573 1532 aa12.89□□□□□ -0.35
PTCH2-201ENST00000372192 TSPY2A6NKD2 308 aa12.89□□□□□ -0.35
PTCH2-201ENST00000372192 CYP2C19P33261 490 aa12.89□□□□□ -0.35
PTCH2-201ENST00000372192 TDRD12Q587J7 1177 aaKnown RBP12.89□□□□□ -0.35
PTCH2-201ENST00000372192 FAM76AQ8TAV0 307 aa12.89□□□□□ -0.35
PTCH2-201ENST00000372192 STAMQ92783 540 aa12.89□□□□□ -0.35
PTCH2-201ENST00000372192 FOXP1Q9H334 677 aaPredicted RBP12.89□□□□□ -0.35
PTCH2-201ENST00000372192 RBM28Q9NW13 759 aaKnown RBP12.89□□□□□ -0.35
PTCH2-201ENST00000372192 V9GY48 417 aaPredicted RBP12.89□□□□□ -0.35
PTCH2-201ENST00000372192 MYO5BQ9ULV0 1848 aa12.89□□□□□ -0.35
PTCH2-201ENST00000372192 OPA1O60313 960 aa12.89□□□□□ -0.35
PTCH2-201ENST00000372192 FDPSP14324 419 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms