RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 EIF4ENIF1Q9NRA8 985 aaKnown RBP33.42■■■□□ 2.94
SSBP3-204ENST00000371320 HPSEQ9Y251 543 aa33.42■■■□□ 2.94
SSBP3-204ENST00000371320 TAF1P21675 1872 aa33.42■■■□□ 2.94
SSBP3-204ENST00000371320 DEXIO95424 95 aa33.41■■■□□ 2.94
SSBP3-204ENST00000371320 RPS8P62241 208 aaKnown RBP33.41■■■□□ 2.94
SSBP3-204ENST00000371320 DYNLL1P63167 89 aaKnown RBP33.41■■■□□ 2.94
SSBP3-204ENST00000371320 CCDC144BQ3MJ40 725 aa33.41■■■□□ 2.94
SSBP3-204ENST00000371320 RC3H1Q5TC82 1133 aaKnown RBP33.41■■■□□ 2.94
SSBP3-204ENST00000371320 FBXO33Q7Z6M2 555 aa33.41■■■□□ 2.94
SSBP3-204ENST00000371320 NLRP3Q96P20 1036 aa33.41■■■□□ 2.94
SSBP3-204ENST00000371320 BPIFA3Q9BQP9 254 aa33.41■■■□□ 2.94
SSBP3-204ENST00000371320 DYNC1I1O14576 645 aa33.41■■■□□ 2.94
SSBP3-204ENST00000371320 RRP9O43818 475 aaKnown RBP33.41■■■□□ 2.94
SSBP3-204ENST00000371320 NLRP12P59046 1061 aa33.41■■■□□ 2.94
SSBP3-204ENST00000371320 SRP68Q9UHB9 627 aaKnown RBP33.41■■■□□ 2.94
SSBP3-204ENST00000371320 A0A1B0GUL6 1792 aa33.41■■■□□ 2.94
SSBP3-204ENST00000371320 BTBD18B2RXH4 712 aa33.4■■■□□ 2.94
SSBP3-204ENST00000371320 RPS6KA4O75676 772 aa33.4■■■□□ 2.94
SSBP3-204ENST00000371320 NBPF5PQ86XG9 351 aaPredicted RBP33.4■■■□□ 2.94
SSBP3-204ENST00000371320 DIS3L2Q8IYB7 885 aaKnown RBP33.4■■■□□ 2.94
SSBP3-204ENST00000371320 BRIP1Q9BX63 1249 aa33.4■■■□□ 2.94
SSBP3-204ENST00000371320 TNKSO95271 1327 aa33.4■■■□□ 2.94
SSBP3-204ENST00000371320 BIN1O00499 593 aa33.4■■■□□ 2.94
SSBP3-204ENST00000371320 SEMA3EO15041 775 aa33.4■■■□□ 2.94
SSBP3-204ENST00000371320 CUTAO60888 179 aa33.4■■■□□ 2.94
SSBP3-204ENST00000371320 HSP90AA2PQ14568 343 aaPredicted RBP33.4■■■□□ 2.94
SSBP3-204ENST00000371320 SEC23AQ15436 765 aa33.4■■■□□ 2.94
SSBP3-204ENST00000371320 RESP18Q5W5W9 173 aa33.4■■■□□ 2.94
SSBP3-204ENST00000371320 CMTR1Q8N1G2 835 aaKnown RBP33.4■■■□□ 2.94
SSBP3-204ENST00000371320 MYRIPQ8NFW9 859 aa33.4■■■□□ 2.94
SSBP3-204ENST00000371320 KCNJ14Q9UNX9 436 aa33.4■■■□□ 2.94
SSBP3-204ENST00000371320 CACTINQ8WUQ7 758 aaKnown RBP33.39■■■□□ 2.94
SSBP3-204ENST00000371320 CLIC6Q96NY7 704 aa33.39■■■□□ 2.94
SSBP3-204ENST00000371320 FAM237AA0A1B0GTK4 181 aa33.38■■■□□ 2.93
SSBP3-204ENST00000371320 ZPR1O75312 459 aa33.38■■■□□ 2.93
SSBP3-204ENST00000371320 SCN7AQ01118 1682 aa33.38■■■□□ 2.93
SSBP3-204ENST00000371320 CACNA1SQ13698 1873 aa33.38■■■□□ 2.93
SSBP3-204ENST00000371320 SMIM22K7EJ46 135 aa33.38■■■□□ 2.93
SSBP3-204ENST00000371320 ZNF384Q8TF68 577 aa33.38■■■□□ 2.93
SSBP3-204ENST00000371320 FOXP1Q9H334 677 aaPredicted RBP33.38■■■□□ 2.93
SSBP3-204ENST00000371320 GNPATO15228 680 aa33.37■■■□□ 2.93
SSBP3-204ENST00000371320 KLRK1P26718 216 aa33.37■■■□□ 2.93
SSBP3-204ENST00000371320 PPP2R5BQ15173 497 aa33.36■■■□□ 2.93
SSBP3-204ENST00000371320 ZSCAN10Q96SZ4 725 aaPredicted RBP33.36■■■□□ 2.93
SSBP3-204ENST00000371320 ANKRD2Q9GZV1 360 aa33.36■■■□□ 2.93
SSBP3-204ENST00000371320 CYP2D7A0A087X1C5 515 aa33.35■■■□□ 2.93
SSBP3-204ENST00000371320 KRI1Q8N9T8 703 aaKnown RBP33.35■■■□□ 2.93
SSBP3-204ENST00000371320 ENAHQ8N8S7 591 aaPredicted RBP33.35■■■□□ 2.93
SSBP3-204ENST00000371320 NSUN4Q96CB9 384 aaKnown RBP33.35■■■□□ 2.93
SSBP3-204ENST00000371320 CASZ1Q86V15 1759 aa33.34■■■□□ 2.93
SSBP3-204ENST00000371320 HIBADHP31937 336 aaKnown RBP33.34■■■□□ 2.93
SSBP3-204ENST00000371320 TPTE2Q6XPS3 522 aa33.34■■■□□ 2.93
SSBP3-204ENST00000371320 NEMFO60524 1076 aa33.33■■■□□ 2.93
SSBP3-204ENST00000371320 TOB1P50616 345 aaPredicted RBP33.33■■■□□ 2.93
SSBP3-204ENST00000371320 RILPL1Q5EBL4 403 aa33.33■■■□□ 2.93
SSBP3-204ENST00000371320 LRRC8AQ8IWT6 810 aa33.33■■■□□ 2.93
SSBP3-204ENST00000371320 TFCP2L1Q9NZI6 479 aa33.33■■■□□ 2.93
SSBP3-204ENST00000371320 PCP11498 1178 aaKnown RBP33.33■■■□□ 2.93
SSBP3-204ENST00000371320 TPM4P67936 248 aa33.33■■■□□ 2.93
SSBP3-204ENST00000371320 RBM10P98175 930 aaKnown RBP33.33■■■□□ 2.93
SSBP3-204ENST00000371320 MECOMQ03112 1051 aa33.33■■■□□ 2.93
SSBP3-204ENST00000371320 CTR9Q6PD62 1173 aa33.33■■■□□ 2.93
SSBP3-204ENST00000371320 TUBE1Q9UJT0 475 aa33.33■■■□□ 2.93
SSBP3-204ENST00000371320 PDS5AQ29RF7 1337 aaKnown RBP33.32■■■□□ 2.93
SSBP3-204ENST00000371320 AKAP17AQ02040 695 aaKnown RBP33.32■■■□□ 2.92
SSBP3-204ENST00000371320 CHAF1AQ13111 956 aaPredicted RBP33.32■■■□□ 2.92
SSBP3-204ENST00000371320 CCDC24Q8N4L8 307 aa33.32■■■□□ 2.92
SSBP3-204ENST00000371320 RNF26Q9BY78 433 aaPredicted RBP33.32■■■□□ 2.92
SSBP3-204ENST00000371320 KCNH3Q9ULD8 1083 aa33.32■■■□□ 2.92
SSBP3-204ENST00000371320 SMTNL1A8MU46 457 aa33.32■■■□□ 2.92
SSBP3-204ENST00000371320 IFIT1BQ5T764 474 aaKnown RBP33.32■■■□□ 2.92
SSBP3-204ENST00000371320 IQCA1Q86XH1 822 aa33.32■■■□□ 2.92
SSBP3-204ENST00000371320 PRDM1O75626 825 aa33.31■■■□□ 2.92
SSBP3-204ENST00000371320 CATIPQ7Z7H3 387 aa33.31■■■□□ 2.92
SSBP3-204ENST00000371320 FAM13BQ9NYF5 915 aa33.31■■■□□ 2.92
SSBP3-204ENST00000371320 RTCBQ9Y3I0 505 aaKnown RBP33.31■■■□□ 2.92
SSBP3-204ENST00000371320 FGRP09769 529 aa33.3■■■□□ 2.92
SSBP3-204ENST00000371320 NR5A1Q13285 461 aa33.3■■■□□ 2.92
SSBP3-204ENST00000371320 FILIP1Q7Z7B0 1213 aa33.3■■■□□ 2.92
SSBP3-204ENST00000371320 CCNL1Q9UK58 526 aaPredicted RBP33.3■■■□□ 2.92
SSBP3-204ENST00000371320 DUOX1Q9NRD9 1551 aa33.3■■■□□ 2.92
SSBP3-204ENST00000371320 USP17L12C9JPN9 530 aa33.3■■■□□ 2.92
SSBP3-204ENST00000371320 USP17L21D6R901 530 aa33.3■■■□□ 2.92
SSBP3-204ENST00000371320 ISM2Q6H9L7 571 aa33.3■■■□□ 2.92
SSBP3-204ENST00000371320 PNOCQ13519 176 aa33.29■■■□□ 2.92
SSBP3-204ENST00000371320 ARID5BQ14865 1188 aa33.29■■■□□ 2.92
SSBP3-204ENST00000371320 LONRF3Q496Y0 759 aa33.29■■■□□ 2.92
SSBP3-204ENST00000371320 KRBA2Q6ZNG9 492 aa33.29■■■□□ 2.92
SSBP3-204ENST00000371320 CNNM3Q8NE01 707 aa33.29■■■□□ 2.92
SSBP3-204ENST00000371320 CRNKL1Q9BZJ0 848 aaKnown RBP33.29■■■□□ 2.92
SSBP3-204ENST00000371320 XBP1P17861 261 aa33.28■■■□□ 2.92
SSBP3-204ENST00000371320 AATFQ9NY61 560 aaKnown RBP eCLIP33.28■■■□□ 2.92
SSBP3-204ENST00000371320 NCAPHQ15003 741 aa33.27■■■□□ 2.92
SSBP3-204ENST00000371320 OXER1Q8TDS5 423 aa33.27■■■□□ 2.92
SSBP3-204ENST00000371320 IKBKBO14920 756 aa33.27■■■□□ 2.92
SSBP3-204ENST00000371320 PTPREP23469 700 aa33.27■■■□□ 2.92
SSBP3-204ENST00000371320 GTF2F1P35269 517 aaKnown RBP eCLIP33.27■■■□□ 2.921e-6■■■■□ 23.4
SSBP3-204ENST00000371320 RBM28Q9NW13 759 aaKnown RBP33.27■■■□□ 2.92
SSBP3-204ENST00000371320 FBXO2Q9UK22 296 aaPredicted RBP33.27■■■□□ 2.92
SSBP3-204ENST00000371320 SMC2O95347 1197 aa33.26■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms