RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 KAT6BQ8WYB5 2073 aa24.74■■□□□ 1.55
TM9SF3-201ENST00000371142 ARHGEF35A5YM69 484 aa24.74■■□□□ 1.55
TM9SF3-201ENST00000371142 GPR161Q8N6U8 529 aaKnown RBP24.74■■□□□ 1.55
TM9SF3-201ENST00000371142 BEND3Q5T5X7 828 aa24.74■■□□□ 1.55
TM9SF3-201ENST00000371142 C8orf74Q6P047 294 aa24.74■■□□□ 1.55
TM9SF3-201ENST00000371142 DYMQ7RTS9 669 aa24.74■■□□□ 1.55
TM9SF3-201ENST00000371142 CCDC24Q8N4L8 307 aa24.74■■□□□ 1.55
TM9SF3-201ENST00000371142 CLSTN2Q9H4D0 955 aa24.74■■□□□ 1.55
TM9SF3-201ENST00000371142 BIN2Q9UBW5 565 aaPredicted RBP24.74■■□□□ 1.55
TM9SF3-201ENST00000371142 PIK3C2GO75747 1445 aa24.73■■□□□ 1.55
TM9SF3-201ENST00000371142 USH1GQ495M9 461 aa24.73■■□□□ 1.55
TM9SF3-201ENST00000371142 GINS2Q9Y248 185 aa24.73■■□□□ 1.55
TM9SF3-201ENST00000371142 PARP10Q53GL7 1025 aa24.73■■□□□ 1.55
TM9SF3-201ENST00000371142 CCDC117Q8IWD4 279 aaPredicted RBP24.73■■□□□ 1.55
TM9SF3-201ENST00000371142 CCDC94Q9BW85 323 aaPredicted RBP24.73■■□□□ 1.55
TM9SF3-201ENST00000371142 NBPF14Q5TI25 921 aa24.73■■□□□ 1.55
TM9SF3-201ENST00000371142 GEN1Q17RS7 908 aa24.73■■□□□ 1.55
TM9SF3-201ENST00000371142 LLPHQ9BRT6 129 aaKnown RBP24.73■■□□□ 1.55
TM9SF3-201ENST00000371142 NAP1L3Q99457 506 aaPredicted RBP24.73■■□□□ 1.55
TM9SF3-201ENST00000371142 MAPKBP1O60336 1514 aa24.73■■□□□ 1.55
TM9SF3-201ENST00000371142 INTS8Q75QN2 995 aaKnown RBP24.72■■□□□ 1.55
TM9SF3-201ENST00000371142 SUCLG2Q96I99 432 aa24.72■■□□□ 1.55
TM9SF3-201ENST00000371142 CFAP57Q96MR6 1250 aa24.72■■□□□ 1.55
TM9SF3-201ENST00000371142 KCNA6P17658 529 aa24.72■■□□□ 1.55
TM9SF3-201ENST00000371142 CSRNP2Q9H175 543 aa24.72■■□□□ 1.55
TM9SF3-201ENST00000371142 CUTAO60888 179 aa24.72■■□□□ 1.55
TM9SF3-201ENST00000371142 RAD51AP2Q09MP3 1159 aa24.72■■□□□ 1.55
TM9SF3-201ENST00000371142 TRIM31Q9BZY9 425 aa24.72■■□□□ 1.55
TM9SF3-201ENST00000371142 SNX29Q8TEQ0 813 aa24.72■■□□□ 1.55
TM9SF3-201ENST00000371142 UGGT2Q9NYU1 1516 aa24.71■■□□□ 1.55
TM9SF3-201ENST00000371142 CETN3O15182 167 aa24.71■■□□□ 1.55
TM9SF3-201ENST00000371142 A1BGP04217 495 aa24.71■■□□□ 1.55
TM9SF3-201ENST00000371142 HSPA2P54652 639 aa24.71■■□□□ 1.55
TM9SF3-201ENST00000371142 LIN9Q5TKA1 542 aa24.71■■□□□ 1.55
TM9SF3-201ENST00000371142 LGR6Q9HBX8 967 aa24.71■■□□□ 1.55
TM9SF3-201ENST00000371142 SLC8A3P57103 927 aa24.71■■□□□ 1.55
TM9SF3-201ENST00000371142 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.71■■□□□ 1.55
TM9SF3-201ENST00000371142 FNBP4Q8N3X1 1017 aaPredicted RBP24.71■■□□□ 1.55
TM9SF3-201ENST00000371142 TESK2Q96S53 571 aa24.71■■□□□ 1.55
TM9SF3-201ENST00000371142 UTP11Q9Y3A2 253 aaKnown RBP24.71■■□□□ 1.55
TM9SF3-201ENST00000371142 CRCPO75575 148 aa24.71■■□□□ 1.55
TM9SF3-201ENST00000371142 PPARDQ03181 441 aa24.71■■□□□ 1.55
TM9SF3-201ENST00000371142 ZNF408Q9H9D4 720 aa24.71■■□□□ 1.55
TM9SF3-201ENST00000371142 TAB2Q9NYJ8 693 aa24.71■■□□□ 1.55
TM9SF3-201ENST00000371142 TTF2Q9UNY4 1162 aaKnown RBP24.71■■□□□ 1.55
TM9SF3-201ENST00000371142 ZNF518AQ6AHZ1 1483 aa24.71■■□□□ 1.55
TM9SF3-201ENST00000371142 ADCY7P51828 1080 aa24.7■■□□□ 1.55
TM9SF3-201ENST00000371142 ATP10BO94823 1461 aa24.7■■□□□ 1.55
TM9SF3-201ENST00000371142 hCG_1642624A0A1W2PR95 340 aa24.7■■□□□ 1.55
TM9SF3-201ENST00000371142 KCNJ14Q9UNX9 436 aa24.7■■□□□ 1.55
TM9SF3-201ENST00000371142 CBX8Q9HC52 389 aa24.7■■□□□ 1.54
TM9SF3-201ENST00000371142 STIM2Q9P246 746 aa24.7■■□□□ 1.54
TM9SF3-201ENST00000371142 EXOC7Q9UPT5 735 aa24.7■■□□□ 1.54
TM9SF3-201ENST00000371142 USP19O94966 1318 aa24.7■■□□□ 1.54
TM9SF3-201ENST00000371142 DAPK3O43293 454 aa24.7■■□□□ 1.54
TM9SF3-201ENST00000371142 TTC31Q49AM3 519 aaPredicted RBP24.7■■□□□ 1.54
TM9SF3-201ENST00000371142 NOP56O00567 594 aaKnown RBP24.69■■□□□ 1.54
TM9SF3-201ENST00000371142 ATP5DP30049 168 aa24.69■■□□□ 1.54
TM9SF3-201ENST00000371142 TCP10Q12799 353 aa24.69■■□□□ 1.54
TM9SF3-201ENST00000371142 LRWD1Q9UFC0 647 aa24.69■■□□□ 1.54
TM9SF3-201ENST00000371142 ZNF202O95125 648 aa24.69■■□□□ 1.54
TM9SF3-201ENST00000371142 TUBBP07437 444 aa24.69■■□□□ 1.54
TM9SF3-201ENST00000371142 USTQ9Y2C2 406 aa24.69■■□□□ 1.54
TM9SF3-201ENST00000371142 FAM170AA1A519 330 aa24.69■■□□□ 1.54
TM9SF3-201ENST00000371142 ZNF365Q70YC5 407 aa24.69■■□□□ 1.54
TM9SF3-201ENST00000371142 UBL4BQ8N7F7 174 aa24.69■■□□□ 1.54
TM9SF3-201ENST00000371142 NOD1Q9Y239 953 aa24.69■■□□□ 1.54
TM9SF3-201ENST00000371142 NELFCDQ8IXH7 590 aa24.69■■□□□ 1.54
TM9SF3-201ENST00000371142 CCT6BQ92526 530 aa24.69■■□□□ 1.54
TM9SF3-201ENST00000371142 SECISBP2LQ93073 1101 aaKnown RBP24.69■■□□□ 1.54
TM9SF3-201ENST00000371142 CLUL1Q15846 466 aa24.69■■□□□ 1.54
TM9SF3-201ENST00000371142 ERO1AQ96HE7 468 aa24.69■■□□□ 1.54
TM9SF3-201ENST00000371142 NOX5Q96PH1 765 aa24.69■■□□□ 1.54
TM9SF3-201ENST00000371142 NLRP12P59046 1061 aa24.68■■□□□ 1.54
TM9SF3-201ENST00000371142 TEX14Q8IWB6 1497 aa24.68■■□□□ 1.54
TM9SF3-201ENST00000371142 PRKG1Q13976 671 aa24.68■■□□□ 1.54
TM9SF3-201ENST00000371142 NONOQ15233 471 aaKnown RBP eCLIP24.68■■□□□ 1.54
TM9SF3-201ENST00000371142 HERC4Q5GLZ8 1057 aaPredicted RBP24.68■■□□□ 1.54
TM9SF3-201ENST00000371142 MYCT1Q8N699 235 aa24.68■■□□□ 1.54
TM9SF3-201ENST00000371142 AFAP1L1Q8TED9 768 aa24.68■■□□□ 1.54
TM9SF3-201ENST00000371142 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.68■■□□□ 1.54
TM9SF3-201ENST00000371142 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.68■■□□□ 1.54
TM9SF3-201ENST00000371142 PPANQ9NQ55 473 aaKnown RBP24.68■■□□□ 1.54
TM9SF3-201ENST00000371142 OGFRQ9NZT2 677 aa24.68■■□□□ 1.54
TM9SF3-201ENST00000371142 PNMA6EA0A0J9YXQ4 647 aa24.68■■□□□ 1.54
TM9SF3-201ENST00000371142 CPXCR1Q8N123 301 aa24.68■■□□□ 1.54
TM9SF3-201ENST00000371142 HAUS7Q99871 368 aa24.68■■□□□ 1.54
TM9SF3-201ENST00000371142 SDAD1Q9NVU7 687 aaKnown RBP eCLIP24.68■■□□□ 1.542e-7■■■■□ 22.1
TM9SF3-201ENST00000371142 SLC1A4P43007 532 aa24.68■■□□□ 1.54
TM9SF3-201ENST00000371142 SPATA5Q8NB90 893 aa24.68■■□□□ 1.54
TM9SF3-201ENST00000371142 HSPA1LP34931 641 aa24.67■■□□□ 1.54
TM9SF3-201ENST00000371142 CDC37L1Q7L3B6 337 aa24.67■■□□□ 1.54
TM9SF3-201ENST00000371142 MAPKAPK5Q8IW41 473 aa24.67■■□□□ 1.54
TM9SF3-201ENST00000371142 PSMB7Q99436 277 aa24.67■■□□□ 1.54
TM9SF3-201ENST00000371142 ZNF532Q9HCE3 1301 aa24.67■■□□□ 1.54
TM9SF3-201ENST00000371142 SGSM2O43147 1006 aa24.67■■□□□ 1.54
TM9SF3-201ENST00000371142 CARD6Q9BX69 1037 aa24.67■■□□□ 1.54
TM9SF3-201ENST00000371142 TRAPPC8Q9Y2L5 1435 aa24.67■■□□□ 1.54
TM9SF3-201ENST00000371142 ACTN4O43707 911 aaKnown RBP24.67■■□□□ 1.54
TM9SF3-201ENST00000371142 ZAP70P43403 619 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms