RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 PPP1R42Q7Z4L9 355 aa9.54□□□□□ -0.88
LCA5-201ENST00000369846 SCYL3Q8IZE3 742 aa9.54□□□□□ -0.88
LCA5-201ENST00000369846 SYCP3Q8IZU3 236 aa9.54□□□□□ -0.88
LCA5-201ENST00000369846 PARD6BQ9BYG5 372 aa9.54□□□□□ -0.88
LCA5-201ENST00000369846 PTPDC1A2A3K4 754 aa9.54□□□□□ -0.88
LCA5-201ENST00000369846 CCDC151A5D8V7 595 aa9.54□□□□□ -0.88
LCA5-201ENST00000369846 SKIP12755 728 aa9.54□□□□□ -0.88
LCA5-201ENST00000369846 RAPGEF1Q13905 1077 aa9.54□□□□□ -0.88
LCA5-201ENST00000369846 NOP53Q9NZM5 478 aaKnown RBP9.54□□□□□ -0.88
LCA5-201ENST00000369846 ZRANB1Q9UGI0 708 aa9.54□□□□□ -0.88
LCA5-201ENST00000369846 ITSN2Q9NZM3 1697 aa9.53□□□□□ -0.88
LCA5-201ENST00000369846 TRIM75PA6NK02 468 aa9.53□□□□□ -0.88
LCA5-201ENST00000369846 RTEL1-TNFRSF6BF6WH68 1400 aa9.53□□□□□ -0.88
LCA5-201ENST00000369846 PCYT1AP49585 367 aa9.53□□□□□ -0.88
LCA5-201ENST00000369846 SKOR1P84550 965 aa9.53□□□□□ -0.88
LCA5-201ENST00000369846 MTMR3Q13615 1198 aa9.53□□□□□ -0.88
LCA5-201ENST00000369846 DENND2CQ68D51 928 aa9.53□□□□□ -0.88
LCA5-201ENST00000369846 NCOA7Q8NI08 942 aa9.53□□□□□ -0.88
LCA5-201ENST00000369846 RPGRIP1Q96KN7 1286 aa9.53□□□□□ -0.88
LCA5-201ENST00000369846 CD2APQ9Y5K6 639 aa9.53□□□□□ -0.88
LCA5-201ENST00000369846 PDHA1P08559 390 aa9.53□□□□□ -0.88
LCA5-201ENST00000369846 NBPF7P0C2Y1 421 aaPredicted RBP9.53□□□□□ -0.88
LCA5-201ENST00000369846 CROCCP2Q86T23 111 aa9.53□□□□□ -0.88
LCA5-201ENST00000369846 USP6NLQ92738 828 aa9.53□□□□□ -0.88
LCA5-201ENST00000369846 NOX5Q96PH1 765 aa9.53□□□□□ -0.88
LCA5-201ENST00000369846 MRPL46Q9H2W6 279 aaKnown RBP9.53□□□□□ -0.88
LCA5-201ENST00000369846 ASIC3Q9UHC3 531 aa9.53□□□□□ -0.88
LCA5-201ENST00000369846 VIRMAQ69YN4 1812 aaKnown RBP9.53□□□□□ -0.88
LCA5-201ENST00000369846 CATIPQ7Z7H3 387 aa9.53□□□□□ -0.88
LCA5-201ENST00000369846 RHPN1Q8TCX5 695 aa9.53□□□□□ -0.88
LCA5-201ENST00000369846 A0A087WZG4 1122 aa9.52□□□□□ -0.88
LCA5-201ENST00000369846 ZBTB43O43298 467 aa9.52□□□□□ -0.88
LCA5-201ENST00000369846 GMNNO75496 209 aa9.52□□□□□ -0.88
LCA5-201ENST00000369846 RRS1Q15050 365 aaKnown RBP9.52□□□□□ -0.88
LCA5-201ENST00000369846 SRGAP1Q7Z6B7 1085 aa9.52□□□□□ -0.88
LCA5-201ENST00000369846 TRMT44Q8IYL2 757 aaKnown RBP9.52□□□□□ -0.88
LCA5-201ENST00000369846 TRPA1O75762 1119 aa9.52□□□□□ -0.89
LCA5-201ENST00000369846 SLC9C1Q4G0N8 1177 aa9.52□□□□□ -0.89
LCA5-201ENST00000369846 Q9H521 79 aa9.52□□□□□ -0.89
LCA5-201ENST00000369846 PAIP2BQ9ULR5 123 aaKnown RBP9.52□□□□□ -0.89
LCA5-201ENST00000369846 ASXL1Q8IXJ9 1541 aa9.52□□□□□ -0.89
LCA5-201ENST00000369846 ATP10BO94823 1461 aa9.52□□□□□ -0.89
LCA5-201ENST00000369846 ZPR1O75312 459 aa9.52□□□□□ -0.89
LCA5-201ENST00000369846 SUN1O94901 812 aa9.52□□□□□ -0.89
LCA5-201ENST00000369846 TROVE2P10155 538 aaKnown RBP eCLIP9.52□□□□□ -0.89
LCA5-201ENST00000369846 PSME1Q06323 249 aa9.52□□□□□ -0.89
LCA5-201ENST00000369846 AMOTQ4VCS5 1084 aa9.52□□□□□ -0.89
LCA5-201ENST00000369846 PLEKHM2Q8IWE5 1019 aa9.52□□□□□ -0.89
LCA5-201ENST00000369846 PLIN2Q99541 437 aa9.52□□□□□ -0.89
LCA5-201ENST00000369846 MKNK2Q9HBH9 465 aa9.52□□□□□ -0.89
LCA5-201ENST00000369846 VAT1LQ9HCJ6 419 aa9.52□□□□□ -0.89
LCA5-201ENST00000369846 PPP1R1BQ9UD71 204 aaPredicted RBP9.52□□□□□ -0.89
LCA5-201ENST00000369846 TRIM35Q9UPQ4 493 aa9.52□□□□□ -0.89
LCA5-201ENST00000369846 MAGI1Q96QZ7 1491 aaPredicted RBP9.52□□□□□ -0.89
LCA5-201ENST00000369846 BRD1O95696 1058 aa9.52□□□□□ -0.89
LCA5-201ENST00000369846 SERPINB6P35237 376 aa9.52□□□□□ -0.89
LCA5-201ENST00000369846 IRX4P78413 519 aa9.52□□□□□ -0.89
LCA5-201ENST00000369846 METTL24Q5JXM2 366 aa9.52□□□□□ -0.89
LCA5-201ENST00000369846 SEL1L2Q5TEA6 688 aa9.52□□□□□ -0.89
LCA5-201ENST00000369846 ANLNQ9NQW6 1124 aa9.52□□□□□ -0.89
LCA5-201ENST00000369846 TAB2Q9NYJ8 693 aa9.52□□□□□ -0.89
LCA5-201ENST00000369846 CDC23Q9UJX2 597 aa9.52□□□□□ -0.89
LCA5-201ENST00000369846 CA8P35219 290 aa9.51□□□□□ -0.89
LCA5-201ENST00000369846 PLEKHO1Q53GL0 409 aaPredicted RBP9.51□□□□□ -0.89
LCA5-201ENST00000369846 ZNF530Q6P9A1 599 aaPredicted RBP9.51□□□□□ -0.89
LCA5-201ENST00000369846 PPP1R21Q6ZMI0 780 aa9.51□□□□□ -0.89
LCA5-201ENST00000369846 THOC1Q96FV9 657 aaKnown RBP9.51□□□□□ -0.89
LCA5-201ENST00000369846 H0Y3Z8 333 aa9.51□□□□□ -0.89
LCA5-201ENST00000369846 APOEP02649 317 aa9.51□□□□□ -0.89
LCA5-201ENST00000369846 ELF1P32519 619 aa9.51□□□□□ -0.89
LCA5-201ENST00000369846 SRLQ86TD4 932 aa9.51□□□□□ -0.89
LCA5-201ENST00000369846 FNBP4Q8N3X1 1017 aaPredicted RBP9.51□□□□□ -0.89
LCA5-201ENST00000369846 NOC4LQ9BVI4 516 aaKnown RBP9.51□□□□□ -0.89
LCA5-201ENST00000369846 ACTR5Q9H9F9 607 aaPredicted RBP9.51□□□□□ -0.89
LCA5-201ENST00000369846 CABP1Q9NZU7 370 aa9.51□□□□□ -0.89
LCA5-201ENST00000369846 AK9Q5TCS8 1911 aa9.51□□□□□ -0.89
LCA5-201ENST00000369846 SPOPO43791 374 aa9.51□□□□□ -0.89
LCA5-201ENST00000369846 BMP15O95972 392 aa9.51□□□□□ -0.89
LCA5-201ENST00000369846 CASP8Q14790 479 aa9.51□□□□□ -0.89
LCA5-201ENST00000369846 NUDCD3Q8IVD9 361 aa9.51□□□□□ -0.89
LCA5-201ENST00000369846 ANKRD44Q8N8A2 993 aa9.51□□□□□ -0.89
LCA5-201ENST00000369846 FERMT2Q96AC1 680 aa9.51□□□□□ -0.89
LCA5-201ENST00000369846 PPP1R13BQ96KQ4 1090 aa9.51□□□□□ -0.89
LCA5-201ENST00000369846 INTS9Q9NV88 658 aaKnown RBP9.51□□□□□ -0.89
LCA5-201ENST00000369846 THEGQ9P2T0 379 aa9.51□□□□□ -0.89
LCA5-201ENST00000369846 PSDA5PKW4 1024 aaPredicted RBP9.5□□□□□ -0.89
LCA5-201ENST00000369846 CTNND1O60716 968 aaKnown RBP9.5□□□□□ -0.89
LCA5-201ENST00000369846 KMT5BQ4FZB7 885 aa9.5□□□□□ -0.89
LCA5-201ENST00000369846 PIP4K2CQ8TBX8 421 aa9.5□□□□□ -0.89
LCA5-201ENST00000369846 PALMDQ9NP74 551 aa9.5□□□□□ -0.89
LCA5-201ENST00000369846 PLCB1Q9NQ66 1216 aa9.5□□□□□ -0.89
LCA5-201ENST00000369846 ABCC10Q5T3U5 1492 aa9.5□□□□□ -0.89
LCA5-201ENST00000369846 ZNF202O95125 648 aa9.5□□□□□ -0.89
LCA5-201ENST00000369846 TRIM14Q14142 442 aa9.5□□□□□ -0.89
LCA5-201ENST00000369846 RPS6KA1Q15418 735 aa9.5□□□□□ -0.89
LCA5-201ENST00000369846 DYDC2Q96IM9 177 aa9.5□□□□□ -0.89
LCA5-201ENST00000369846 ST7Q9NRC1 585 aa9.5□□□□□ -0.89
LCA5-201ENST00000369846 CTNND2Q9UQB3 1225 aa9.5□□□□□ -0.89
LCA5-201ENST00000369846 MYO5CQ9NQX4 1742 aa9.5□□□□□ -0.89
LCA5-201ENST00000369846 PIK3C2GO75747 1445 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms