RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 SLC17A8Q8NDX2 589 aa5.92□□□□□ -1.46
UBE3D-202ENST00000369746 UPF2Q9HAU5 1272 aaKnown RBP5.92□□□□□ -1.46
UBE3D-202ENST00000369746 GOPCQ9HD26 462 aa5.92□□□□□ -1.46
UBE3D-202ENST00000369746 MKS1Q9NXB0 559 aa5.92□□□□□ -1.46
UBE3D-202ENST00000369746 NPC1L1Q9UHC9 1359 aa5.92□□□□□ -1.46
UBE3D-202ENST00000369746 GOLGA6L6A8MZA4 724 aa5.92□□□□□ -1.46
UBE3D-202ENST00000369746 GOLGA6L22H0YM25 854 aa5.92□□□□□ -1.46
UBE3D-202ENST00000369746 FKTNO75072 461 aa5.92□□□□□ -1.46
UBE3D-202ENST00000369746 GNALP38405 381 aa5.92□□□□□ -1.46
UBE3D-202ENST00000369746 TNNT3P45378 269 aaPredicted RBP5.92□□□□□ -1.46
UBE3D-202ENST00000369746 GPSM2P81274 684 aa5.92□□□□□ -1.46
UBE3D-202ENST00000369746 CBX1P83916 185 aa5.92□□□□□ -1.46
UBE3D-202ENST00000369746 FOXK2Q01167 660 aa5.92□□□□□ -1.46
UBE3D-202ENST00000369746 NFIXQ14938 502 aa5.92□□□□□ -1.46
UBE3D-202ENST00000369746 SEPT2Q15019 361 aa5.92□□□□□ -1.46
UBE3D-202ENST00000369746 ATP2B3Q16720 1220 aa5.92□□□□□ -1.46
UBE3D-202ENST00000369746 SLC4A8Q2Y0W8 1093 aa5.92□□□□□ -1.46
UBE3D-202ENST00000369746 LRIT3Q3SXY7 679 aa5.92□□□□□ -1.46
UBE3D-202ENST00000369746 TBC1D10BQ4KMP7 808 aaPredicted RBP5.92□□□□□ -1.46
UBE3D-202ENST00000369746 ZNF394Q53GI3 561 aa5.92□□□□□ -1.46
UBE3D-202ENST00000369746 CCDC91Q7Z6B0 441 aa5.92□□□□□ -1.46
UBE3D-202ENST00000369746 GOLGA6L1Q8N7Z2 621 aa5.92□□□□□ -1.46
UBE3D-202ENST00000369746 C2orf69Q8N8R5 385 aa5.92□□□□□ -1.46
UBE3D-202ENST00000369746 TBC1D22AQ8WUA7 517 aa5.92□□□□□ -1.46
UBE3D-202ENST00000369746 SYTL4Q96C24 671 aaPredicted RBP5.92□□□□□ -1.46
UBE3D-202ENST00000369746 HTATIP2Q9BUP3 242 aa5.92□□□□□ -1.46
UBE3D-202ENST00000369746 PTPRHQ9HD43 1115 aa5.92□□□□□ -1.46
UBE3D-202ENST00000369746 BOLA2-SMG1P6H3BVE0 249 aa5.91□□□□□ -1.46
UBE3D-202ENST00000369746 DNAJA1P31689 397 aaKnown RBP5.91□□□□□ -1.46
UBE3D-202ENST00000369746 SERPINB4P48594 390 aa5.91□□□□□ -1.46
UBE3D-202ENST00000369746 CCDC15Q0P6D6 951 aa5.91□□□□□ -1.46
UBE3D-202ENST00000369746 CRY2Q49AN0 593 aa5.91□□□□□ -1.46
UBE3D-202ENST00000369746 PHLDB3Q6NSJ2 640 aa5.91□□□□□ -1.46
UBE3D-202ENST00000369746 AMIGO3Q86WK7 504 aa5.91□□□□□ -1.46
UBE3D-202ENST00000369746 RASSF4Q9H2L5 321 aa5.91□□□□□ -1.46
UBE3D-202ENST00000369746 CASS4Q9NQ75 786 aa5.91□□□□□ -1.46
UBE3D-202ENST00000369746 KMT5AQ9NQR1 393 aa5.91□□□□□ -1.46
UBE3D-202ENST00000369746 AVENQ9NQS1 362 aaPredicted RBP5.91□□□□□ -1.46
UBE3D-202ENST00000369746 CUEDC1Q9NWM3 386 aaPredicted RBP5.91□□□□□ -1.46
UBE3D-202ENST00000369746 GPRC5DQ9NZD1 345 aa5.91□□□□□ -1.46
UBE3D-202ENST00000369746 RABL2AQ9UBK7 228 aaPredicted RBP5.91□□□□□ -1.46
UBE3D-202ENST00000369746 SUN2Q9UH99 717 aa5.91□□□□□ -1.46
UBE3D-202ENST00000369746 MARSP56192 900 aaKnown RBP5.91□□□□□ -1.46
UBE3D-202ENST00000369746 LRRC41Q15345 812 aa5.91□□□□□ -1.46
UBE3D-202ENST00000369746 TERF2Q15554 542 aa5.91□□□□□ -1.46
UBE3D-202ENST00000369746 CDC37Q16543 378 aaPredicted RBP5.91□□□□□ -1.46
UBE3D-202ENST00000369746 RNF187Q5TA31 235 aaPredicted RBP5.91□□□□□ -1.46
UBE3D-202ENST00000369746 UBE2Q1Q7Z7E8 422 aa5.91□□□□□ -1.46
UBE3D-202ENST00000369746 MYO1HQ8N1T3 1032 aa5.91□□□□□ -1.46
UBE3D-202ENST00000369746 ZNF710Q8N1W2 664 aa5.91□□□□□ -1.46
UBE3D-202ENST00000369746 HELQQ8TDG4 1101 aa5.91□□□□□ -1.46
UBE3D-202ENST00000369746 ZNF652Q9Y2D9 606 aa5.91□□□□□ -1.46
UBE3D-202ENST00000369746 MORC2Q9Y6X9 1032 aaPredicted RBP5.91□□□□□ -1.46
UBE3D-202ENST00000369746 COL3A1P02461 1466 aaPredicted RBP5.91□□□□□ -1.46
UBE3D-202ENST00000369746 REC8O95072 547 aa5.9□□□□□ -1.46
UBE3D-202ENST00000369746 PDGFRBP09619 1106 aa5.9□□□□□ -1.46
UBE3D-202ENST00000369746 PPP1R18Q6NYC8 613 aa5.9□□□□□ -1.46
UBE3D-202ENST00000369746 DZIP3Q86Y13 1208 aaKnown RBP5.9□□□□□ -1.46
UBE3D-202ENST00000369746 ATRIPQ8WXE1 791 aa5.9□□□□□ -1.46
UBE3D-202ENST00000369746 ERP27Q96DN0 273 aa5.9□□□□□ -1.46
UBE3D-202ENST00000369746 VMP1Q96GC9 406 aa5.9□□□□□ -1.46
UBE3D-202ENST00000369746 CCDC39Q9UFE4 941 aa5.9□□□□□ -1.46
UBE3D-202ENST00000369746 ZNF232Q9UNY5 417 aa5.9□□□□□ -1.46
UBE3D-202ENST00000369746 ELL2O00472 640 aaPredicted RBP5.9□□□□□ -1.46
UBE3D-202ENST00000369746 DDNO94850 711 aaPredicted RBP5.9□□□□□ -1.46
UBE3D-202ENST00000369746 POU5F1BQ06416 359 aa5.9□□□□□ -1.46
UBE3D-202ENST00000369746 TTLL12Q14166 644 aaPredicted RBP5.9□□□□□ -1.46
UBE3D-202ENST00000369746 PDXDC1Q6P996 788 aa5.9□□□□□ -1.46
UBE3D-202ENST00000369746 IQCF2Q8IXL9 164 aa5.9□□□□□ -1.46
UBE3D-202ENST00000369746 ZNF396Q96N95 335 aaPredicted RBP5.9□□□□□ -1.46
UBE3D-202ENST00000369746 CEP89Q96ST8 783 aa5.9□□□□□ -1.46
UBE3D-202ENST00000369746 REPIN1Q9BWE0 567 aaKnown RBP5.9□□□□□ -1.46
UBE3D-202ENST00000369746 NYXQ9GZU5 481 aa5.9□□□□□ -1.46
UBE3D-202ENST00000369746 CHMP5Q9NZZ3 219 aa5.9□□□□□ -1.46
UBE3D-202ENST00000369746 EVLQ9UI08 416 aaPredicted RBP5.9□□□□□ -1.46
UBE3D-202ENST00000369746 PPEF1O14829 653 aaPredicted RBP5.9□□□□□ -1.47
UBE3D-202ENST00000369746 SLC26A4O43511 780 aa5.9□□□□□ -1.47
UBE3D-202ENST00000369746 IPO7O95373 1038 aaKnown RBP5.9□□□□□ -1.47
UBE3D-202ENST00000369746 CYP19A1P11511 503 aaPredicted RBP5.9□□□□□ -1.47
UBE3D-202ENST00000369746 PTK7Q13308 1070 aa5.9□□□□□ -1.47
UBE3D-202ENST00000369746 MPRIPQ6WCQ1 1025 aa5.9□□□□□ -1.47
UBE3D-202ENST00000369746 LMNTD2Q8IXW0 634 aa5.9□□□□□ -1.47
UBE3D-202ENST00000369746 NDUFAF2Q8N183 169 aa5.9□□□□□ -1.47
UBE3D-202ENST00000369746 USP25Q9UHP3 1055 aa5.9□□□□□ -1.47
UBE3D-202ENST00000369746 hCG_1984214I3L0E3 225 aa5.89□□□□□ -1.47
UBE3D-202ENST00000369746 NBPF7P0C2Y1 421 aaPredicted RBP5.89□□□□□ -1.47
UBE3D-202ENST00000369746 ATP2B1P20020 1258 aa5.89□□□□□ -1.47
UBE3D-202ENST00000369746 IL4RP24394 825 aa5.89□□□□□ -1.47
UBE3D-202ENST00000369746 MAN1A1P33908 653 aa5.89□□□□□ -1.47
UBE3D-202ENST00000369746 ADD2P35612 726 aa5.89□□□□□ -1.47
UBE3D-202ENST00000369746 ZNF132P52740 706 aa5.89□□□□□ -1.47
UBE3D-202ENST00000369746 RRP1P56182 461 aaKnown RBP5.89□□□□□ -1.47
UBE3D-202ENST00000369746 MAP3K11Q16584 847 aa5.89□□□□□ -1.47
UBE3D-202ENST00000369746 FXNQ16595 210 aa5.89□□□□□ -1.47
UBE3D-202ENST00000369746 C8orf34Q49A92 452 aa5.89□□□□□ -1.47
UBE3D-202ENST00000369746 ZNF746Q6NUN9 644 aaPredicted RBP5.89□□□□□ -1.47
UBE3D-202ENST00000369746 PLPP6Q8IY26 295 aa5.89□□□□□ -1.47
UBE3D-202ENST00000369746 CHPFQ8IZ52 775 aa5.89□□□□□ -1.47
UBE3D-202ENST00000369746 ANO2Q9NQ90 1003 aa5.89□□□□□ -1.47
UBE3D-202ENST00000369746 PPP2R3BQ9Y5P8 575 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms