RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 TFAP4Q01664 338 aa6.05□□□□□ -1.44
SMNDC1-202ENST00000369603 APOA5Q6Q788 366 aa6.05□□□□□ -1.44
SMNDC1-202ENST00000369603 PI16Q6UXB8 463 aa6.05□□□□□ -1.44
SMNDC1-202ENST00000369603 FERMT2Q96AC1 680 aa6.05□□□□□ -1.44
SMNDC1-202ENST00000369603 ACBD3Q9H3P7 528 aa6.05□□□□□ -1.44
SMNDC1-202ENST00000369603 PIH1D3Q9NQM4 214 aaKnown RBP6.05□□□□□ -1.44
SMNDC1-202ENST00000369603 KCNH3Q9ULD8 1083 aa6.05□□□□□ -1.44
SMNDC1-202ENST00000369603 COL5A2P05997 1499 aaPredicted RBP6.05□□□□□ -1.44
SMNDC1-202ENST00000369603 PIK3C2AO00443 1686 aa6.05□□□□□ -1.44
SMNDC1-202ENST00000369603 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.05□□□□□ -1.44
SMNDC1-202ENST00000369603 GRAPQ13588 217 aa6.05□□□□□ -1.44
SMNDC1-202ENST00000369603 ALX1Q15699 326 aa6.05□□□□□ -1.44
SMNDC1-202ENST00000369603 OTUD7BQ6GQQ9 843 aa6.05□□□□□ -1.44
SMNDC1-202ENST00000369603 TMEM87AQ8NBN3 555 aa6.05□□□□□ -1.44
SMNDC1-202ENST00000369603 GRAPLQ8TC17 118 aaPredicted RBP6.05□□□□□ -1.44
SMNDC1-202ENST00000369603 SDR42E1Q8WUS8 393 aa6.05□□□□□ -1.44
SMNDC1-202ENST00000369603 DHX58Q96C10 678 aa6.05□□□□□ -1.44
SMNDC1-202ENST00000369603 STRBPQ96SI9 672 aaKnown RBP6.05□□□□□ -1.44
SMNDC1-202ENST00000369603 MYL10Q9BUA6 226 aa6.05□□□□□ -1.44
SMNDC1-202ENST00000369603 SAP30BPQ9UHR5 308 aaKnown RBP6.05□□□□□ -1.44
SMNDC1-202ENST00000369603 POLD1P28340 1107 aa6.05□□□□□ -1.44
SMNDC1-202ENST00000369603 ADD1P35611 737 aaKnown RBP6.05□□□□□ -1.44
SMNDC1-202ENST00000369603 MRPL12P52815 198 aaKnown RBP6.05□□□□□ -1.44
SMNDC1-202ENST00000369603 NOLC1Q14978 699 aaKnown RBP eCLIP6.05□□□□□ -1.44
SMNDC1-202ENST00000369603 ARHGAP29Q52LW3 1261 aa6.05□□□□□ -1.44
SMNDC1-202ENST00000369603 RRAGBQ5VZM2 374 aa6.05□□□□□ -1.44
SMNDC1-202ENST00000369603 GPT2Q8TD30 523 aa6.05□□□□□ -1.44
SMNDC1-202ENST00000369603 TGFBRAP1Q8WUH2 860 aa6.05□□□□□ -1.44
SMNDC1-202ENST00000369603 PPP1R9BQ96SB3 815 aa6.05□□□□□ -1.44
SMNDC1-202ENST00000369603 TTC12Q9H892 705 aaPredicted RBP6.05□□□□□ -1.44
SMNDC1-202ENST00000369603 EXOC1Q9NV70 894 aa6.05□□□□□ -1.44
SMNDC1-202ENST00000369603 SALL3Q9BXA9 1300 aa6.05□□□□□ -1.44
SMNDC1-202ENST00000369603 CARMIL3Q8ND23 1372 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 A0A1W2PQ27 194 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 A0A1W2PQ64 194 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 A0A1W2PQD8 194 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 PSMA7O14818 248 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 ZNF202O95125 648 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 TUBB4AP04350 444 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 ARID4AP29374 1257 aaPredicted RBP6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 AFMP43652 599 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 TERF1P54274 439 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 NOSTRINQ8IVI9 506 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 JDP2Q8WYK2 163 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 USP28Q96RU2 1077 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 SH2D4AQ9H788 454 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 SLIT3O75094 1523 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 SH2B2O14492 632 aaPredicted RBP6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 CYP2E1P05181 493 aaPredicted RBP6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 PPP1R2P41236 205 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 PLCD1P51178 756 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 MYL5Q02045 173 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 SLC27A3Q5K4L6 730 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 TTC38Q5R3I4 469 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 TEX35Q5T0J7 233 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 ISM2Q6H9L7 571 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 CCDC186Q7Z3E2 898 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 KRT25Q7Z3Z0 450 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 MAPKAPK5Q8IW41 473 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 MARCH10Q8NA82 808 aaPredicted RBP6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 TEKT1Q969V4 418 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 CCDC94Q9BW85 323 aaPredicted RBP6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 RNF26Q9BY78 433 aaPredicted RBP6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 RTEL1Q9NZ71 1219 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 NWD1Q149M9 1564 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 NFAT5O94916 1531 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 IDEP14735 1019 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 MCM7P33993 719 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 TOB2Q14106 344 aaPredicted RBP6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 KRT79Q5XKE5 535 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 GALNT17Q6IS24 598 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 STXBP4Q6ZWJ1 553 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 LUZP1Q86V48 1076 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 SYNE4Q8N205 404 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 CAGE1Q8TC20 777 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 ERCC4Q92889 916 aaPredicted RBP6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 CNKSR1Q969H4 720 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 KAZALD1Q96I82 304 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 GJD4Q96KN9 370 aaPredicted RBP6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 BRIP1Q9BX63 1249 aa6.04□□□□□ -1.44
SMNDC1-202ENST00000369603 LARGE1O95461 756 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 IFNAR1P17181 557 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 CMA1P23946 247 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 GTF2IP78347 998 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 SF3B3Q15393 1217 aaKnown RBP6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 LCORLQ8N3X6 602 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 MLKLQ8NB16 471 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 POLR3EQ9NVU0 708 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 SRP68Q9UHB9 627 aaKnown RBP6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 MINPP1Q9UNW1 487 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.03□□□□□ -1.448e-7■□□□□ 9.4
SMNDC1-202ENST00000369603 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 AFF2P51816 1311 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 N4BP3O15049 544 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 CAMTA2O94983 1202 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 TNNT1P13805 278 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 MTIF2P46199 727 aaKnown RBP6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 TNNI2P48788 182 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 RCAN1P53805 252 aa6.03□□□□□ -1.44
SMNDC1-202ENST00000369603 NOM1Q5C9Z4 860 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms