RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 GLI3P10071 1580 aa11.99□□□□□ -0.49
LYSMD1-201ENST00000368908 CTAGE9A4FU28 777 aa11.99□□□□□ -0.49
LYSMD1-201ENST00000368908 ATP2B1P20020 1258 aa11.99□□□□□ -0.49
LYSMD1-201ENST00000368908 BMP6P22004 513 aa11.99□□□□□ -0.49
LYSMD1-201ENST00000368908 RASGRP2Q7LDG7 609 aa11.99□□□□□ -0.49
LYSMD1-201ENST00000368908 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.99□□□□□ -0.49
LYSMD1-201ENST00000368908 CCDC51Q96ER9 411 aa11.99□□□□□ -0.49
LYSMD1-201ENST00000368908 NCAPGQ9BPX3 1015 aa11.99□□□□□ -0.49
LYSMD1-201ENST00000368908 MAN1B1Q9UKM7 699 aa11.99□□□□□ -0.49
LYSMD1-201ENST00000368908 TTF2Q9UNY4 1162 aaKnown RBP11.99□□□□□ -0.49
LYSMD1-201ENST00000368908 NFE2L3Q9Y4A8 694 aa11.99□□□□□ -0.49
LYSMD1-201ENST00000368908 A0A0G2JLW4 131 aa11.98□□□□□ -0.49
LYSMD1-201ENST00000368908 GOLIM4O00461 696 aa11.98□□□□□ -0.49
LYSMD1-201ENST00000368908 PRC1O43663 620 aa11.98□□□□□ -0.49
LYSMD1-201ENST00000368908 PPFIA3O75145 1194 aa11.98□□□□□ -0.49
LYSMD1-201ENST00000368908 CHST3Q7LGC8 479 aa11.98□□□□□ -0.49
LYSMD1-201ENST00000368908 FOXP4Q8IVH2 680 aaPredicted RBP11.98□□□□□ -0.49
LYSMD1-201ENST00000368908 KCNH3Q9ULD8 1083 aa11.98□□□□□ -0.49
LYSMD1-201ENST00000368908 SCN11AQ9UI33 1791 aa11.98□□□□□ -0.49
LYSMD1-201ENST00000368908 ZMYM6O95789 1325 aa11.98□□□□□ -0.49
LYSMD1-201ENST00000368908 KDM6AO15550 1401 aaPredicted RBP11.98□□□□□ -0.49
LYSMD1-201ENST00000368908 CTAGE15A4D2H0 777 aa11.98□□□□□ -0.49
LYSMD1-201ENST00000368908 N4BP1O75113 896 aaKnown RBP11.98□□□□□ -0.49
LYSMD1-201ENST00000368908 CDKL5O76039 1030 aa11.98□□□□□ -0.49
LYSMD1-201ENST00000368908 CTAGE8P0CG41 777 aa11.98□□□□□ -0.49
LYSMD1-201ENST00000368908 ERCC5P28715 1186 aaPredicted RBP11.98□□□□□ -0.49
LYSMD1-201ENST00000368908 CDC27P30260 824 aa11.98□□□□□ -0.49
LYSMD1-201ENST00000368908 SARSP49591 514 aaKnown RBP11.98□□□□□ -0.49
LYSMD1-201ENST00000368908 VSNL1P62760 191 aa11.98□□□□□ -0.49
LYSMD1-201ENST00000368908 AIMP1Q12904 312 aaKnown RBP11.98□□□□□ -0.49
LYSMD1-201ENST00000368908 MORC3Q14149 939 aa11.98□□□□□ -0.49
LYSMD1-201ENST00000368908 LONRF3Q496Y0 759 aa11.98□□□□□ -0.49
LYSMD1-201ENST00000368908 CTAGE6Q86UF2 777 aa11.98□□□□□ -0.49
LYSMD1-201ENST00000368908 VPS37DQ86XT2 251 aa11.98□□□□□ -0.49
LYSMD1-201ENST00000368908 CTAGE4Q8IX94 777 aa11.98□□□□□ -0.49
LYSMD1-201ENST00000368908 MYD88Q99836 296 aa11.98□□□□□ -0.49
LYSMD1-201ENST00000368908 PUF60Q9UHX1 559 aaKnown RBP11.98□□□□□ -0.49
LYSMD1-201ENST00000368908 WDR17Q8IZU2 1322 aa11.98□□□□□ -0.49
LYSMD1-201ENST00000368908 PRAMEF22A3QJZ6 481 aa11.97□□□□□ -0.49
LYSMD1-201ENST00000368908 MCM3P25205 808 aa11.97□□□□□ -0.49
LYSMD1-201ENST00000368908 EIF5P55010 431 aaKnown RBP11.97□□□□□ -0.49
LYSMD1-201ENST00000368908 IMMTQ16891 758 aaKnown RBP11.97□□□□□ -0.49
LYSMD1-201ENST00000368908 FOXR1Q6PIV2 292 aa11.97□□□□□ -0.49
LYSMD1-201ENST00000368908 MYCBPQ99417 103 aaPredicted RBP11.97□□□□□ -0.49
LYSMD1-201ENST00000368908 NAPGQ99747 312 aaPredicted RBP11.97□□□□□ -0.49
LYSMD1-201ENST00000368908 QTRT2Q9H974 415 aaKnown RBP11.97□□□□□ -0.49
LYSMD1-201ENST00000368908 AXIN2Q9Y2T1 843 aa11.97□□□□□ -0.49
LYSMD1-201ENST00000368908 SPATA31A5Q5VU36 1347 aa11.97□□□□□ -0.49
LYSMD1-201ENST00000368908 SPATA31A7Q8IWB4 1347 aa11.97□□□□□ -0.49
LYSMD1-201ENST00000368908 MYO5AQ9Y4I1 1855 aaKnown RBP11.97□□□□□ -0.49
LYSMD1-201ENST00000368908 LAMB4A4D0S4 1761 aa11.97□□□□□ -0.49
LYSMD1-201ENST00000368908 A0A087WUV0 522 aaPredicted RBP11.97□□□□□ -0.49
LYSMD1-201ENST00000368908 SOWAHDA6NJG2 315 aa11.97□□□□□ -0.49
LYSMD1-201ENST00000368908 PBX1P40424 430 aa11.97□□□□□ -0.49
LYSMD1-201ENST00000368908 PLCD1P51178 756 aa11.97□□□□□ -0.49
LYSMD1-201ENST00000368908 EVA1CP58658 441 aa11.97□□□□□ -0.49
LYSMD1-201ENST00000368908 FMR1Q06787 632 aaKnown RBP eCLIP11.97□□□□□ -0.49
LYSMD1-201ENST00000368908 POSTNQ15063 836 aa11.97□□□□□ -0.49
LYSMD1-201ENST00000368908 KIF4BQ2VIQ3 1234 aa11.97□□□□□ -0.49
LYSMD1-201ENST00000368908 TTC39AQ5SRH9 613 aa11.97□□□□□ -0.49
LYSMD1-201ENST00000368908 SWT1Q5T5J6 900 aaKnown RBP11.97□□□□□ -0.49
LYSMD1-201ENST00000368908 RAD9BQ6WBX8 426 aa11.97□□□□□ -0.49
LYSMD1-201ENST00000368908 ZSWIM4Q9H7M6 989 aa11.97□□□□□ -0.49
LYSMD1-201ENST00000368908 GPHNQ9NQX3 736 aaPredicted RBP11.97□□□□□ -0.49
LYSMD1-201ENST00000368908 THSD7AQ9UPZ6 1657 aa11.96□□□□□ -0.49
LYSMD1-201ENST00000368908 M0R2C6 588 aa11.96□□□□□ -0.49
LYSMD1-201ENST00000368908 SEMA3EO15041 775 aa11.96□□□□□ -0.49
LYSMD1-201ENST00000368908 MTF1Q14872 753 aa11.96□□□□□ -0.49
LYSMD1-201ENST00000368908 PTPN21Q16825 1174 aa11.96□□□□□ -0.49
LYSMD1-201ENST00000368908 ZNF569Q5MCW4 686 aa11.96□□□□□ -0.49
LYSMD1-201ENST00000368908 CERS3Q8IU89 383 aa11.96□□□□□ -0.49
LYSMD1-201ENST00000368908 NCOA7Q8NI08 942 aa11.96□□□□□ -0.49
LYSMD1-201ENST00000368908 AFAP1L1Q8TED9 768 aa11.96□□□□□ -0.49
LYSMD1-201ENST00000368908 CCDC102AQ96A19 550 aa11.96□□□□□ -0.49
LYSMD1-201ENST00000368908 ALG1Q9BT22 464 aa11.96□□□□□ -0.49
LYSMD1-201ENST00000368908 TEX13AQ9BXU3 409 aaPredicted RBP11.96□□□□□ -0.49
LYSMD1-201ENST00000368908 DEF6Q9H4E7 631 aa11.96□□□□□ -0.49
LYSMD1-201ENST00000368908 FAM204AQ9H8W3 233 aa11.96□□□□□ -0.49
LYSMD1-201ENST00000368908 LZTFL1Q9NQ48 299 aa11.96□□□□□ -0.49
LYSMD1-201ENST00000368908 ANTXR2P58335 489 aa11.96□□□□□ -0.5
LYSMD1-201ENST00000368908 DNAJC21Q5F1R6 531 aaKnown RBP11.96□□□□□ -0.5
LYSMD1-201ENST00000368908 KRT40Q6A162 431 aa11.96□□□□□ -0.5
LYSMD1-201ENST00000368908 KANK3Q6NY19 840 aa11.96□□□□□ -0.5
LYSMD1-201ENST00000368908 POTEAQ6S8J7 498 aa11.96□□□□□ -0.5
LYSMD1-201ENST00000368908 MMS22LQ6ZRQ5 1243 aa11.96□□□□□ -0.5
LYSMD1-201ENST00000368908 TADA2BQ86TJ2 420 aa11.96□□□□□ -0.5
LYSMD1-201ENST00000368908 PPFIBP1Q86W92 1011 aa11.96□□□□□ -0.5
LYSMD1-201ENST00000368908 KRI1Q8N9T8 703 aaKnown RBP11.96□□□□□ -0.5
LYSMD1-201ENST00000368908 XAGE3Q8WTP9 111 aa11.96□□□□□ -0.5
LYSMD1-201ENST00000368908 GJD4Q96KN9 370 aaPredicted RBP11.96□□□□□ -0.5
LYSMD1-201ENST00000368908 IRX2Q9BZI1 471 aaPredicted RBP11.96□□□□□ -0.5
LYSMD1-201ENST00000368908 THRAP3Q9Y2W1 955 aaKnown RBP11.96□□□□□ -0.5
LYSMD1-201ENST00000368908 ITIH6Q6UXX5 1313 aa11.96□□□□□ -0.5
LYSMD1-201ENST00000368908 SPATA31A1Q5TZJ5 1347 aa11.95□□□□□ -0.5
LYSMD1-201ENST00000368908 MFAP3LO75121 409 aa11.95□□□□□ -0.5
LYSMD1-201ENST00000368908 PRPF6O94906 941 aaKnown RBP11.95□□□□□ -0.5
LYSMD1-201ENST00000368908 ZFYP08048 801 aaPredicted RBP11.95□□□□□ -0.5
LYSMD1-201ENST00000368908 CASP7P55210 303 aa11.95□□□□□ -0.5
LYSMD1-201ENST00000368908 MAP9Q49MG5 647 aa11.95□□□□□ -0.5
LYSMD1-201ENST00000368908 TTLL5Q6EMB2 1281 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms