RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.33■■□□□ 1.17
CHTOP-202ENST00000368687 PICK1Q9NRD5 415 aa22.33■■□□□ 1.17
CHTOP-202ENST00000368687 PHF20L1A8MW92 1017 aa22.32■■□□□ 1.16
CHTOP-202ENST00000368687 IGHDP01880 384 aa22.32■■□□□ 1.16
CHTOP-202ENST00000368687 TSHZ3Q63HK5 1081 aa22.32■■□□□ 1.16
CHTOP-202ENST00000368687 TTC6Q86TZ1 520 aa22.32■■□□□ 1.16
CHTOP-202ENST00000368687 SCYL3Q8IZE3 742 aa22.32■■□□□ 1.16
CHTOP-202ENST00000368687 OTUD5Q96G74 571 aa22.32■■□□□ 1.16
CHTOP-202ENST00000368687 DDRGK1Q96HY6 314 aa22.32■■□□□ 1.16
CHTOP-202ENST00000368687 TRPA1O75762 1119 aa22.31■■□□□ 1.16
CHTOP-202ENST00000368687 INPP5BP32019 993 aa22.31■■□□□ 1.16
CHTOP-202ENST00000368687 PDE1AP54750 535 aa22.31■■□□□ 1.16
CHTOP-202ENST00000368687 METTL16Q86W50 562 aaKnown RBP22.31■■□□□ 1.16
CHTOP-202ENST00000368687 CRACR2BQ8N4Y2 399 aaPredicted RBP22.31■■□□□ 1.16
CHTOP-202ENST00000368687 TBC1D2Q9BYX2 928 aa22.31■■□□□ 1.16
CHTOP-202ENST00000368687 LNPKQ9C0E8 428 aa22.31■■□□□ 1.16
CHTOP-202ENST00000368687 DDX60LQ5H9U9 1706 aaKnown RBP22.31■■□□□ 1.16
CHTOP-202ENST00000368687 TESPA1A2RU30 521 aaPredicted RBP22.3■■□□□ 1.16
CHTOP-202ENST00000368687 CETPP11597 493 aa22.3■■□□□ 1.16
CHTOP-202ENST00000368687 IRX6P78412 446 aaPredicted RBP22.3■■□□□ 1.16
CHTOP-202ENST00000368687 SNAPC2Q13487 334 aa22.3■■□□□ 1.16
CHTOP-202ENST00000368687 OTUD7AQ8TE49 926 aaPredicted RBP22.3■■□□□ 1.16
CHTOP-202ENST00000368687 CFHR5Q9BXR6 569 aa22.3■■□□□ 1.16
CHTOP-202ENST00000368687 EHD4Q9H223 541 aa22.3■■□□□ 1.16
CHTOP-202ENST00000368687 ATP8A2Q9NTI2 1148 aa22.3■■□□□ 1.16
CHTOP-202ENST00000368687 GINM1Q9NU53 330 aa22.3■■□□□ 1.16
CHTOP-202ENST00000368687 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.3■■□□□ 1.16
CHTOP-202ENST00000368687 RNF113AO15541 343 aaKnown RBP22.29■■□□□ 1.16
CHTOP-202ENST00000368687 GJA5P36382 358 aa22.29■■□□□ 1.16
CHTOP-202ENST00000368687 B4GALNT3Q6L9W6 998 aa22.29■■□□□ 1.16
CHTOP-202ENST00000368687 AMOTL1Q8IY63 956 aa22.29■■□□□ 1.16
CHTOP-202ENST00000368687 APPBP2Q92624 585 aa22.29■■□□□ 1.16
CHTOP-202ENST00000368687 PALD1Q9ULE6 856 aa22.29■■□□□ 1.16
CHTOP-202ENST00000368687 SIPA1L1O43166 1804 aa22.29■■□□□ 1.16
CHTOP-202ENST00000368687 MBD4O95243 580 aa22.28■■□□□ 1.16
CHTOP-202ENST00000368687 NOM1Q5C9Z4 860 aaKnown RBP22.28■■□□□ 1.16
CHTOP-202ENST00000368687 IFNL1Q8IU54 200 aa22.28■■□□□ 1.16
CHTOP-202ENST00000368687 LCORLQ8N3X6 602 aa22.28■■□□□ 1.16
CHTOP-202ENST00000368687 EVI5LQ96CN4 794 aa22.28■■□□□ 1.16
CHTOP-202ENST00000368687 FSD1Q9BTV5 496 aa22.28■■□□□ 1.16
CHTOP-202ENST00000368687 ZCCHC17Q9NP64 241 aaKnown RBP22.28■■□□□ 1.16
CHTOP-202ENST00000368687 SERPINB13Q9UIV8 391 aa22.28■■□□□ 1.16
CHTOP-202ENST00000368687 ATAD5Q96QE3 1844 aa22.28■■□□□ 1.16
CHTOP-202ENST00000368687 MS4A4AQ96JQ5 239 aa22.27■■□□□ 1.16
CHTOP-202ENST00000368687 OSBPL3Q9H4L5 887 aa22.27■■□□□ 1.16
CHTOP-202ENST00000368687 SAP30BPQ9UHR5 308 aaKnown RBP22.27■■□□□ 1.16
CHTOP-202ENST00000368687 KCNH4Q9UQ05 1017 aa22.27■■□□□ 1.16
CHTOP-202ENST00000368687 CXCL11O14625 94 aa22.26■■□□□ 1.15
CHTOP-202ENST00000368687 IRF6O14896 467 aa22.26■■□□□ 1.15
CHTOP-202ENST00000368687 GNAT2P19087 354 aa22.26■■□□□ 1.15
CHTOP-202ENST00000368687 ARMT1Q9H993 441 aa22.26■■□□□ 1.15
CHTOP-202ENST00000368687 DCP1AQ9NPI6 582 aaPredicted RBP22.26■■□□□ 1.15
CHTOP-202ENST00000368687 CASP8AP2Q9UKL3 1982 aa22.25■■□□□ 1.15
CHTOP-202ENST00000368687 CCL15-CCL14A0A0B4J2E2 113 aa22.25■■□□□ 1.15
CHTOP-202ENST00000368687 POLR3DP05423 398 aaPredicted RBP22.25■■□□□ 1.15
CHTOP-202ENST00000368687 ASNSP08243 561 aa22.25■■□□□ 1.15
CHTOP-202ENST00000368687 PTPRAP18433 802 aa22.25■■□□□ 1.15
CHTOP-202ENST00000368687 CAP2P40123 477 aa22.25■■□□□ 1.15
CHTOP-202ENST00000368687 CCL15Q16663 113 aa22.25■■□□□ 1.15
CHTOP-202ENST00000368687 CNKSR2Q8WXI2 1034 aa22.25■■□□□ 1.15
CHTOP-202ENST00000368687 MCM9Q9NXL9 1143 aa22.25■■□□□ 1.15
CHTOP-202ENST00000368687 GIMAP6Q6P9H5 292 aa22.24■■□□□ 1.15
CHTOP-202ENST00000368687 PUS7LQ9H0K6 701 aaKnown RBP22.24■■□□□ 1.15
CHTOP-202ENST00000368687 PHIPQ8WWQ0 1821 aa22.23■■□□□ 1.15
CHTOP-202ENST00000368687 SDR42E1Q8WUS8 393 aa22.23■■□□□ 1.15
CHTOP-202ENST00000368687 BRI3BPQ8WY22 251 aa22.23■■□□□ 1.15
CHTOP-202ENST00000368687 ABHD8Q96I13 439 aa22.23■■□□□ 1.15
CHTOP-202ENST00000368687 AS3MTQ9HBK9 375 aa22.23■■□□□ 1.15
CHTOP-202ENST00000368687 SLC4A4Q9Y6R1 1079 aa22.23■■□□□ 1.15
CHTOP-202ENST00000368687 ZHX2Q9Y6X8 837 aa22.23■■□□□ 1.15
CHTOP-202ENST00000368687 BAZ2AQ9UIF9 1905 aaKnown RBP22.22■■□□□ 1.15
CHTOP-202ENST00000368687 FAM196BA6NMK8 535 aa22.22■■□□□ 1.15
CHTOP-202ENST00000368687 IGF2BP3O00425 579 aaKnown RBP eCLIP22.22■■□□□ 1.15
CHTOP-202ENST00000368687 FASTKD5Q7L8L6 764 aaKnown RBP22.22■■□□□ 1.15
CHTOP-202ENST00000368687 PLEKHM2Q8IWE5 1019 aa22.22■■□□□ 1.15
CHTOP-202ENST00000368687 STRBPQ96SI9 672 aaKnown RBP22.22■■□□□ 1.15
CHTOP-202ENST00000368687 ARPP21Q9UBL0 812 aaPredicted RBP22.22■■□□□ 1.15
CHTOP-202ENST00000368687 SWAP70Q9UH65 585 aa22.22■■□□□ 1.15
CHTOP-202ENST00000368687 PTPRFP10586 1907 aa22.21■■□□□ 1.15
CHTOP-202ENST00000368687 MYH8P13535 1937 aa22.21■■□□□ 1.15
CHTOP-202ENST00000368687 USP17L5A8MUK1 530 aa22.21■■□□□ 1.15
CHTOP-202ENST00000368687 TBC1D8O95759 1140 aa22.21■■□□□ 1.15
CHTOP-202ENST00000368687 TATDN1Q6P1N9 297 aa22.21■■□□□ 1.15
CHTOP-202ENST00000368687 OSBP2Q969R2 916 aa22.21■■□□□ 1.15
CHTOP-202ENST00000368687 DNAJC18Q9H819 358 aa22.21■■□□□ 1.15
CHTOP-202ENST00000368687 AFG3L2Q9Y4W6 797 aa22.21■■□□□ 1.15
CHTOP-202ENST00000368687 GPAA1O43292 621 aa22.2■■□□□ 1.14
CHTOP-202ENST00000368687 SLFNL1Q499Z3 407 aa22.2■■□□□ 1.14
CHTOP-202ENST00000368687 ZMYM1Q5SVZ6 1142 aa22.2■■□□□ 1.14
CHTOP-202ENST00000368687 PTPN18Q99952 460 aa22.2■■□□□ 1.14
CHTOP-202ENST00000368687 NACAP1Q9BZK3 213 aa22.2■■□□□ 1.14
CHTOP-202ENST00000368687 MCOLN1Q9GZU1 580 aa22.2■■□□□ 1.14
CHTOP-202ENST00000368687 A0A0G2JLL6 359 aaPredicted RBP22.19■■□□□ 1.14
CHTOP-202ENST00000368687 TRIM6-TRIM34B2RNG4 842 aa22.19■■□□□ 1.14
CHTOP-202ENST00000368687 CENPBP07199 599 aaPredicted RBP22.19■■□□□ 1.14
CHTOP-202ENST00000368687 PRRT2Q7Z6L0 340 aaPredicted RBP22.19■■□□□ 1.14
CHTOP-202ENST00000368687 ANKRD23Q86SG2 305 aa22.19■■□□□ 1.14
CHTOP-202ENST00000368687 ZNF280CQ8ND82 737 aa22.19■■□□□ 1.14
CHTOP-202ENST00000368687 R3HDMLQ9H3Y0 253 aa22.19■■□□□ 1.14
CHTOP-202ENST00000368687 ZFYVE28Q9HCC9 887 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms