RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 TNFAIP1Q13829 316 aa14.53□□□□□ -0.08
TUBE1-202ENST00000368662 KIF4BQ2VIQ3 1234 aa14.53□□□□□ -0.08
TUBE1-202ENST00000368662 FAM83AQ86UY5 434 aa14.53□□□□□ -0.08
TUBE1-202ENST00000368662 EHD4Q9H223 541 aa14.53□□□□□ -0.08
TUBE1-202ENST00000368662 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.53□□□□□ -0.08
TUBE1-202ENST00000368662 ATRNL1Q5VV63 1379 aa14.53□□□□□ -0.08
TUBE1-202ENST00000368662 B4E1Z4 1266 aa14.53□□□□□ -0.08
TUBE1-202ENST00000368662 PRC1O43663 620 aa14.53□□□□□ -0.08
TUBE1-202ENST00000368662 DDNO94850 711 aaPredicted RBP14.53□□□□□ -0.08
TUBE1-202ENST00000368662 CD2BP2O95400 341 aaKnown RBP14.53□□□□□ -0.08
TUBE1-202ENST00000368662 TNNI2P48788 182 aa14.53□□□□□ -0.08
TUBE1-202ENST00000368662 SART3Q15020 963 aaKnown RBP14.53□□□□□ -0.08
TUBE1-202ENST00000368662 NBPF9Q3BBW0 867 aa14.53□□□□□ -0.08
TUBE1-202ENST00000368662 C16orf86Q6ZW13 317 aa14.53□□□□□ -0.08
TUBE1-202ENST00000368662 MKNK2Q9HBH9 465 aa14.53□□□□□ -0.08
TUBE1-202ENST00000368662 SWAP70Q9UH65 585 aa14.53□□□□□ -0.08
TUBE1-202ENST00000368662 SHTN1A0MZ66 631 aa14.52□□□□□ -0.09
TUBE1-202ENST00000368662 CLRN2A0PK11 232 aa14.52□□□□□ -0.09
TUBE1-202ENST00000368662 KDM4AO75164 1064 aa14.52□□□□□ -0.09
TUBE1-202ENST00000368662 RRP12Q5JTH9 1297 aaKnown RBP14.52□□□□□ -0.09
TUBE1-202ENST00000368662 RBM26Q5T8P6 1007 aaKnown RBP14.52□□□□□ -0.09
TUBE1-202ENST00000368662 FAM151AQ8WW52 585 aa14.52□□□□□ -0.09
TUBE1-202ENST00000368662 L3MBTL3Q96JM7 780 aaPredicted RBP14.52□□□□□ -0.09
TUBE1-202ENST00000368662 TMEM87BQ96K49 555 aa14.52□□□□□ -0.09
TUBE1-202ENST00000368662 AGXT2Q9BYV1 514 aa14.52□□□□□ -0.09
TUBE1-202ENST00000368662 VEZTQ9HBM0 779 aa14.52□□□□□ -0.09
TUBE1-202ENST00000368662 PI4KBQ9UBF8 816 aa14.52□□□□□ -0.09
TUBE1-202ENST00000368662 SERPINB13Q9UIV8 391 aa14.52□□□□□ -0.09
TUBE1-202ENST00000368662 LIMCH1Q9UPQ0 1083 aa14.52□□□□□ -0.09
TUBE1-202ENST00000368662 TCP10Q12799 353 aa14.51□□□□□ -0.09
TUBE1-202ENST00000368662 SLC4A8Q2Y0W8 1093 aa14.51□□□□□ -0.09
TUBE1-202ENST00000368662 TBC1D10BQ4KMP7 808 aaPredicted RBP14.51□□□□□ -0.09
TUBE1-202ENST00000368662 Q6ZUG5 572 aa14.51□□□□□ -0.09
TUBE1-202ENST00000368662 SAMD7Q7Z3H4 446 aa14.51□□□□□ -0.09
TUBE1-202ENST00000368662 ZSCAN29Q8IWY8 852 aaPredicted RBP14.51□□□□□ -0.09
TUBE1-202ENST00000368662 STK11IPQ8N1F8 1099 aa14.51□□□□□ -0.09
TUBE1-202ENST00000368662 ZSCAN31Q96LW9 406 aaPredicted RBP14.51□□□□□ -0.09
TUBE1-202ENST00000368662 ZSWIM5Q9P217 1185 aa14.51□□□□□ -0.09
TUBE1-202ENST00000368662 TCP10L2B9ZVM9 353 aa14.51□□□□□ -0.09
TUBE1-202ENST00000368662 IQCA1Q86XH1 822 aa14.51□□□□□ -0.09
TUBE1-202ENST00000368662 TCEANC2Q96MN5 208 aa14.51□□□□□ -0.09
TUBE1-202ENST00000368662 ADARB2Q9NS39 739 aaKnown RBP14.51□□□□□ -0.09
TUBE1-202ENST00000368662 TACC3Q9Y6A5 838 aa14.51□□□□□ -0.09
TUBE1-202ENST00000368662 ERICH2A1L162 156 aa14.5□□□□□ -0.09
TUBE1-202ENST00000368662 GLTPD2A6NH11 291 aa14.5□□□□□ -0.09
TUBE1-202ENST00000368662 RANBP6O60518 1105 aaKnown RBP14.5□□□□□ -0.09
TUBE1-202ENST00000368662 PRDM1O75626 825 aa14.5□□□□□ -0.09
TUBE1-202ENST00000368662 ANTXR2P58335 489 aa14.5□□□□□ -0.09
TUBE1-202ENST00000368662 GABPAQ06546 454 aa14.5□□□□□ -0.09
TUBE1-202ENST00000368662 COL9A3Q14050 684 aaPredicted RBP14.5□□□□□ -0.09
TUBE1-202ENST00000368662 TOB2Q14106 344 aaPredicted RBP14.5□□□□□ -0.09
TUBE1-202ENST00000368662 FOXP4Q8IVH2 680 aaPredicted RBP14.5□□□□□ -0.09
TUBE1-202ENST00000368662 ZNF444Q8N0Y2 327 aaPredicted RBP14.5□□□□□ -0.09
TUBE1-202ENST00000368662 DYNLL2Q96FJ2 89 aa14.5□□□□□ -0.09
TUBE1-202ENST00000368662 INCENPQ9NQS7 918 aa14.5□□□□□ -0.09
TUBE1-202ENST00000368662 SH2B1Q9NRF2 756 aaPredicted RBP14.5□□□□□ -0.09
TUBE1-202ENST00000368662 SMIM22K7EJ46 135 aa14.5□□□□□ -0.09
TUBE1-202ENST00000368662 EGFRP00533 1210 aa14.5□□□□□ -0.09
TUBE1-202ENST00000368662 EPS15P42566 896 aa14.5□□□□□ -0.09
TUBE1-202ENST00000368662 CDK8P49336 464 aa14.5□□□□□ -0.09
TUBE1-202ENST00000368662 CCDC178Q5BJE1 867 aa14.5□□□□□ -0.09
TUBE1-202ENST00000368662 CYB5R4Q7L1T6 521 aa14.5□□□□□ -0.09
TUBE1-202ENST00000368662 CHST3Q7LGC8 479 aa14.5□□□□□ -0.09
TUBE1-202ENST00000368662 ZFPM1Q8IX07 1006 aa14.5□□□□□ -0.09
TUBE1-202ENST00000368662 UBAC1Q9BSL1 405 aa14.5□□□□□ -0.09
TUBE1-202ENST00000368662 TRIM34Q9BYJ4 488 aa14.5□□□□□ -0.09
TUBE1-202ENST00000368662 ANGEL1Q9UNK9 670 aaKnown RBP14.5□□□□□ -0.09
TUBE1-202ENST00000368662 DDTLA6NHG4 134 aaPredicted RBP14.49□□□□□ -0.09
TUBE1-202ENST00000368662 TSPY2A6NKD2 308 aa14.49□□□□□ -0.09
TUBE1-202ENST00000368662 EVX2Q03828 476 aa14.49□□□□□ -0.09
TUBE1-202ENST00000368662 APOBEC3FQ8IUX4 373 aaKnown RBP14.49□□□□□ -0.09
TUBE1-202ENST00000368662 TMTC2Q8N394 836 aa14.49□□□□□ -0.09
TUBE1-202ENST00000368662 CRACR2BQ8N4Y2 399 aaPredicted RBP14.49□□□□□ -0.09
TUBE1-202ENST00000368662 BRF1Q92994 677 aa14.49□□□□□ -0.09
TUBE1-202ENST00000368662 TMX3Q96JJ7 454 aa14.49□□□□□ -0.09
TUBE1-202ENST00000368662 CSRNP1Q96S65 589 aa14.49□□□□□ -0.09
TUBE1-202ENST00000368662 HERC5Q9UII4 1024 aaKnown RBP14.49□□□□□ -0.09
TUBE1-202ENST00000368662 IFIT3O14879 490 aaKnown RBP14.48□□□□□ -0.09
TUBE1-202ENST00000368662 LIFRP42702 1097 aa14.48□□□□□ -0.09
TUBE1-202ENST00000368662 METTL16Q86W50 562 aaKnown RBP14.48□□□□□ -0.09
TUBE1-202ENST00000368662 LRRC2Q9BYS8 371 aa14.48□□□□□ -0.09
TUBE1-202ENST00000368662 HACL1Q9UJ83 578 aa14.48□□□□□ -0.09
TUBE1-202ENST00000368662 CNTNAP1P78357 1384 aa14.48□□□□□ -0.09
TUBE1-202ENST00000368662 IQCA1LA6NCM1 817 aa14.48□□□□□ -0.09
TUBE1-202ENST00000368662 SH2B2O14492 632 aaPredicted RBP14.48□□□□□ -0.09
TUBE1-202ENST00000368662 HSP90AA1P07900 732 aaKnown RBP14.48□□□□□ -0.09
TUBE1-202ENST00000368662 TSPY3P0CV98 308 aa14.48□□□□□ -0.09
TUBE1-202ENST00000368662 TSPY8P0CW00 308 aa14.48□□□□□ -0.09
TUBE1-202ENST00000368662 EVCP57679 992 aa14.48□□□□□ -0.09
TUBE1-202ENST00000368662 NOL8Q76FK4 1167 aaKnown RBP14.48□□□□□ -0.09
TUBE1-202ENST00000368662 SH3BP5LQ7L8J4 393 aa14.48□□□□□ -0.09
TUBE1-202ENST00000368662 TRPM4Q8TD43 1214 aa14.48□□□□□ -0.09
TUBE1-202ENST00000368662 IGDCC4Q8TDY8 1250 aa14.48□□□□□ -0.09
TUBE1-202ENST00000368662 CHMP4CQ96CF2 233 aa14.48□□□□□ -0.09
TUBE1-202ENST00000368662 RASA1P20936 1047 aa14.47□□□□□ -0.09
TUBE1-202ENST00000368662 TMEM67Q5HYA8 995 aa14.47□□□□□ -0.09
TUBE1-202ENST00000368662 SGMS1Q86VZ5 419 aa14.47□□□□□ -0.09
TUBE1-202ENST00000368662 ZNF274Q96GC6 653 aaPredicted RBP14.47□□□□□ -0.09
TUBE1-202ENST00000368662 ZSCAN10Q96SZ4 725 aaPredicted RBP14.47□□□□□ -0.09
TUBE1-202ENST00000368662 TCP11L1Q9NUJ3 509 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms