RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 ZSCAN29Q8IWY8 852 aaPredicted RBP15.13■□□□□ 0.01
EFNA1-201ENST00000368406 SDR42E1Q8WUS8 393 aa15.13■□□□□ 0.01
EFNA1-201ENST00000368406 CSRNP1Q96S65 589 aa15.13■□□□□ 0.01
EFNA1-201ENST00000368406 STRBPQ96SI9 672 aaKnown RBP15.13■□□□□ 0.01
EFNA1-201ENST00000368406 ESYT1Q9BSJ8 1104 aa15.13■□□□□ 0.01
EFNA1-201ENST00000368406 ZNF341Q9BYN7 854 aa15.13■□□□□ 0.01
EFNA1-201ENST00000368406 OSBPL5Q9H0X9 879 aaPredicted RBP15.13■□□□□ 0.01
EFNA1-201ENST00000368406 MYH1P12882 1939 aa15.12■□□□□ 0.01
EFNA1-201ENST00000368406 DDTLA6NHG4 134 aaPredicted RBP15.12■□□□□ 0.01
EFNA1-201ENST00000368406 PRKAB2O43741 272 aa15.12■□□□□ 0.01
EFNA1-201ENST00000368406 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.12■□□□□ 0.01
EFNA1-201ENST00000368406 MIGA2Q7L4E1 593 aa15.12■□□□□ 0.01
EFNA1-201ENST00000368406 DHX36Q9H2U1 1008 aaKnown RBP15.12■□□□□ 0.01
EFNA1-201ENST00000368406 ANO2Q9NQ90 1003 aa15.12■□□□□ 0.01
EFNA1-201ENST00000368406 SAP30BPQ9UHR5 308 aaKnown RBP15.12■□□□□ 0.01
EFNA1-201ENST00000368406 ZNF112Q9UJU3 913 aa15.12■□□□□ 0.01
EFNA1-201ENST00000368406 FLT1P17948 1338 aa15.12■□□□□ 0.01
EFNA1-201ENST00000368406 SGSM2O43147 1006 aa15.11■□□□□ 0.01
EFNA1-201ENST00000368406 TBC1D12O60347 775 aa15.11■□□□□ 0.01
EFNA1-201ENST00000368406 ZBTB48P10074 688 aaPredicted RBP15.11■□□□□ 0.01
EFNA1-201ENST00000368406 KIF23Q02241 960 aaPredicted RBP15.11■□□□□ 0.01
EFNA1-201ENST00000368406 SLC4A8Q2Y0W8 1093 aa15.11■□□□□ 0.01
EFNA1-201ENST00000368406 SPRYD7Q5W111 196 aa15.11■□□□□ 0.01
EFNA1-201ENST00000368406 CLMNQ96JQ2 1002 aa15.11■□□□□ 0.01
EFNA1-201ENST00000368406 ZIC5Q96T25 663 aa15.11■□□□□ 0.01
EFNA1-201ENST00000368406 NAPBQ9H115 298 aa15.11■□□□□ 0.01
EFNA1-201ENST00000368406 ATP8A2Q9NTI2 1148 aa15.11■□□□□ 0.01
EFNA1-201ENST00000368406 CSADQ9Y600 493 aa15.11■□□□□ 0.01
EFNA1-201ENST00000368406 BAZ2AQ9UIF9 1905 aaKnown RBP15.11■□□□□ 0.01
EFNA1-201ENST00000368406 LAMB1P07942 1786 aa15.11■□□□□ 0.01
EFNA1-201ENST00000368406 EIF5BO60841 1220 aaKnown RBP15.1■□□□□ 0.01
EFNA1-201ENST00000368406 POLR3DP05423 398 aaPredicted RBP15.1■□□□□ 0.01
EFNA1-201ENST00000368406 HSPA1AP0DMV8 641 aaKnown RBP15.1■□□□□ 0.01
EFNA1-201ENST00000368406 HSPA1BP0DMV9 641 aaKnown RBP15.1■□□□□ 0.01
EFNA1-201ENST00000368406 VGLL4Q14135 290 aa15.1■□□□□ 0.01
EFNA1-201ENST00000368406 WRNIP1Q96S55 665 aa15.1■□□□□ 0.01
EFNA1-201ENST00000368406 BEGAINQ9BUH8 593 aa15.1■□□□□ 0.01
EFNA1-201ENST00000368406 TRIM34Q9BYJ4 488 aa15.1■□□□□ 0.01
EFNA1-201ENST00000368406 MCM9Q9NXL9 1143 aa15.1■□□□□ 0.01
EFNA1-201ENST00000368406 DDX60LQ5H9U9 1706 aaKnown RBP15.1■□□□□ 0.01
EFNA1-201ENST00000368406 PATL2C9JE40 543 aaKnown RBP15.09■□□□□ 0.01
EFNA1-201ENST00000368406 CA12O43570 354 aa15.09■□□□□ 0.01
EFNA1-201ENST00000368406 HLA-DOAP06340 250 aa15.09■□□□□ 0.01
EFNA1-201ENST00000368406 WNK4Q96J92 1243 aa15.09■□□□□ 0.01
EFNA1-201ENST00000368406 PI4KBQ9UBF8 816 aa15.09■□□□□ 0.01
EFNA1-201ENST00000368406 OTOFQ9HC10 1997 aa15.09■□□□□ 0.01
EFNA1-201ENST00000368406 PHF20L1A8MW92 1017 aa15.09■□□□□ 0.01
EFNA1-201ENST00000368406 REC8O95072 547 aa15.09■□□□□ 0.01
EFNA1-201ENST00000368406 HSPD1P10809 573 aaKnown RBP15.09■□□□□ 0.01
EFNA1-201ENST00000368406 TM4SF4P48230 202 aa15.09■□□□□ 0.01
EFNA1-201ENST00000368406 INHBEP58166 350 aa15.09■□□□□ 0.01
EFNA1-201ENST00000368406 VPS53Q5VIR6 699 aa15.09■□□□□ 0.01
EFNA1-201ENST00000368406 IL25Q9H293 177 aa15.09■□□□□ 0.01
EFNA1-201ENST00000368406 DCP1AQ9NPI6 582 aaPredicted RBP15.09■□□□□ 0.01
EFNA1-201ENST00000368406 ARPP21Q9UBL0 812 aaPredicted RBP15.09■□□□□ 0.01
EFNA1-201ENST00000368406 HERC5Q9UII4 1024 aaKnown RBP15.09■□□□□ 0.01
EFNA1-201ENST00000368406 GSG1L2A8MUP6 293 aa15.08■□□□□ 0
EFNA1-201ENST00000368406 NOL9Q5SY16 702 aaKnown RBP15.08■□□□□ 0
EFNA1-201ENST00000368406 GIMAP6Q6P9H5 292 aa15.08■□□□□ 0
EFNA1-201ENST00000368406 METTL16Q86W50 562 aaKnown RBP15.08■□□□□ 0
EFNA1-201ENST00000368406 ERO1BQ86YB8 467 aa15.08■□□□□ 0
EFNA1-201ENST00000368406 FOXP4Q8IVH2 680 aaPredicted RBP15.08■□□□□ 0
EFNA1-201ENST00000368406 IFNL3Q8IZI9 196 aa15.08■□□□□ 0
EFNA1-201ENST00000368406 CRACR2BQ8N4Y2 399 aaPredicted RBP15.08■□□□□ 0
EFNA1-201ENST00000368406 ZKSCAN4Q969J2 545 aaPredicted RBP15.08■□□□□ 0
EFNA1-201ENST00000368406 ELP3Q9H9T3 547 aa15.08■□□□□ 0
EFNA1-201ENST00000368406 PALD1Q9ULE6 856 aa15.08■□□□□ 0
EFNA1-201ENST00000368406 SNCAIPQ9Y6H5 919 aa15.08■□□□□ 0
EFNA1-201ENST00000368406 MANSC4A6NHS7 340 aaPredicted RBP15.07■□□□□ 0
EFNA1-201ENST00000368406 SPDYE5A6NIY4 337 aa15.07■□□□□ 0
EFNA1-201ENST00000368406 MINDY4BA8MYZ0 360 aa15.07■□□□□ 0
EFNA1-201ENST00000368406 INPP5BP32019 993 aa15.07■□□□□ 0
EFNA1-201ENST00000368406 SREBF2Q12772 1141 aa15.07■□□□□ 0
EFNA1-201ENST00000368406 TTC6Q86TZ1 520 aa15.07■□□□□ 0
EFNA1-201ENST00000368406 OPTNQ96CV9 577 aa15.07■□□□□ 0
EFNA1-201ENST00000368406 DSCC1Q9BVC3 393 aa15.07■□□□□ 0
EFNA1-201ENST00000368406 EPB41L4AQ9HCS5 686 aaPredicted RBP15.07■□□□□ 0
EFNA1-201ENST00000368406 CTNNA3Q9UI47 895 aa15.07■□□□□ 0
EFNA1-201ENST00000368406 LAMA4Q16363 1823 aa15.06■□□□□ 0
EFNA1-201ENST00000368406 USP17L12C9JPN9 530 aa15.06■□□□□ 0
EFNA1-201ENST00000368406 USP17L21D6R901 530 aa15.06■□□□□ 0
EFNA1-201ENST00000368406 CTNND1O60716 968 aaKnown RBP15.06■□□□□ 0
EFNA1-201ENST00000368406 SLC3A2P08195 630 aaKnown RBP15.06■□□□□ 0
EFNA1-201ENST00000368406 GJA5P36382 358 aa15.06■□□□□ 0
EFNA1-201ENST00000368406 CTCFP49711 727 aaPredicted RBP15.06■□□□□ 0
EFNA1-201ENST00000368406 MKRN3Q13064 507 aaKnown RBP15.06■□□□□ 0
EFNA1-201ENST00000368406 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.06■□□□□ 0
EFNA1-201ENST00000368406 SAGE1Q9NXZ1 904 aa15.06■□□□□ 0
EFNA1-201ENST00000368406 U3KPZ7 1027 aaPredicted RBP15.06■□□□□ 0
EFNA1-201ENST00000368406 MYH8P13535 1937 aa15.05■□□□□ 0
EFNA1-201ENST00000368406 TESPA1A2RU30 521 aaPredicted RBP15.05■□□□□ -0
EFNA1-201ENST00000368406 FOXN1O15353 648 aa15.05■□□□□ -0
EFNA1-201ENST00000368406 PTH1RQ03431 593 aa15.05■□□□□ -0
EFNA1-201ENST00000368406 PPATQ06203 517 aa15.05■□□□□ -0
EFNA1-201ENST00000368406 IMMTQ16891 758 aaKnown RBP15.05■□□□□ -0
EFNA1-201ENST00000368406 STK11IPQ8N1F8 1099 aa15.05■□□□□ -0
EFNA1-201ENST00000368406 ZMYM6O95789 1325 aa15.04■□□□□ -0
EFNA1-201ENST00000368406 CYP2D7A0A087X1C5 515 aa15.04■□□□□ -0
EFNA1-201ENST00000368406 FGAP02671 866 aa15.04■□□□□ -0
EFNA1-201ENST00000368406 CYP2D6P10635 497 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms