RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 ECM29Q5VYK3 1845 aa11.97□□□□□ -0.49
CD48-202ENST00000368046 TBC1D12O60347 775 aa11.96□□□□□ -0.49
CD48-202ENST00000368046 IRX5P78411 483 aaPredicted RBP11.96□□□□□ -0.49
CD48-202ENST00000368046 ERO1BQ86YB8 467 aa11.96□□□□□ -0.49
CD48-202ENST00000368046 IFNL1Q8IU54 200 aa11.96□□□□□ -0.49
CD48-202ENST00000368046 EXOC6Q8TAG9 804 aa11.96□□□□□ -0.49
CD48-202ENST00000368046 GCC1Q96CN9 775 aa11.96□□□□□ -0.49
CD48-202ENST00000368046 OPTNQ96CV9 577 aa11.96□□□□□ -0.49
CD48-202ENST00000368046 HAUS7Q99871 368 aa11.96□□□□□ -0.49
CD48-202ENST00000368046 OSBPL5Q9H0X9 879 aaPredicted RBP11.96□□□□□ -0.49
CD48-202ENST00000368046 DHX36Q9H2U1 1008 aaKnown RBP11.96□□□□□ -0.49
CD48-202ENST00000368046 RWDD1Q9H446 243 aaPredicted RBP11.96□□□□□ -0.49
CD48-202ENST00000368046 PAG1Q9NWQ8 432 aa11.96□□□□□ -0.49
CD48-202ENST00000368046 TSKSQ9UJT2 592 aa11.96□□□□□ -0.49
CD48-202ENST00000368046 MYH13Q9UKX3 1938 aa11.96□□□□□ -0.5
CD48-202ENST00000368046 TESPA1A2RU30 521 aaPredicted RBP11.95□□□□□ -0.5
CD48-202ENST00000368046 PHF20L1A8MW92 1017 aa11.95□□□□□ -0.5
CD48-202ENST00000368046 ALDH1A1P00352 501 aa11.95□□□□□ -0.5
CD48-202ENST00000368046 INPP5BP32019 993 aa11.95□□□□□ -0.5
CD48-202ENST00000368046 GJA5P36382 358 aa11.95□□□□□ -0.5
CD48-202ENST00000368046 DYNLL1P63167 89 aaKnown RBP11.95□□□□□ -0.5
CD48-202ENST00000368046 ANKRD45Q5TZF3 282 aa11.95□□□□□ -0.5
CD48-202ENST00000368046 TGFBRAP1Q8WUH2 860 aa11.95□□□□□ -0.5
CD48-202ENST00000368046 GPATCH3Q96I76 525 aa11.95□□□□□ -0.5
CD48-202ENST00000368046 ZBTB47Q9UFB7 747 aaPredicted RBP11.95□□□□□ -0.5
CD48-202ENST00000368046 RFX7Q2KHR2 1363 aa11.94□□□□□ -0.5
CD48-202ENST00000368046 THSD7BQ9C0I4 1608 aa11.94□□□□□ -0.5
CD48-202ENST00000368046 SPDYE5A6NIY4 337 aa11.94□□□□□ -0.5
CD48-202ENST00000368046 PDE6AP16499 860 aa11.94□□□□□ -0.5
CD48-202ENST00000368046 GTF2A2P52657 109 aa11.94□□□□□ -0.5
CD48-202ENST00000368046 PPATQ06203 517 aa11.94□□□□□ -0.5
CD48-202ENST00000368046 OTUD7BQ6GQQ9 843 aa11.94□□□□□ -0.5
CD48-202ENST00000368046 FOXP4Q8IVH2 680 aaPredicted RBP11.94□□□□□ -0.5
CD48-202ENST00000368046 MIGA1Q8NAN2 632 aa11.94□□□□□ -0.5
CD48-202ENST00000368046 EDC3Q96F86 508 aaKnown RBP11.94□□□□□ -0.5
CD48-202ENST00000368046 MS4A4AQ96JQ5 239 aa11.94□□□□□ -0.5
CD48-202ENST00000368046 PI4KBQ9UBF8 816 aa11.94□□□□□ -0.5
CD48-202ENST00000368046 SNCAIPQ9Y6H5 919 aa11.94□□□□□ -0.5
CD48-202ENST00000368046 AKAP11Q9UKA4 1901 aa11.94□□□□□ -0.5
CD48-202ENST00000368046 ATRNL1Q5VV63 1379 aa11.93□□□□□ -0.5
CD48-202ENST00000368046 ZNF532Q9HCE3 1301 aa11.93□□□□□ -0.5
CD48-202ENST00000368046 MAGEB6P1A0A0J9YX57 407 aa11.93□□□□□ -0.5
CD48-202ENST00000368046 CTNND1O60716 968 aaKnown RBP11.93□□□□□ -0.5
CD48-202ENST00000368046 NOL9Q5SY16 702 aaKnown RBP11.93□□□□□ -0.5
CD48-202ENST00000368046 ZSCAN25Q6NSZ9 544 aa11.93□□□□□ -0.5
CD48-202ENST00000368046 MAPKAPK5Q8IW41 473 aa11.93□□□□□ -0.5
CD48-202ENST00000368046 RIOK1Q9BRS2 568 aaKnown RBP11.93□□□□□ -0.5
CD48-202ENST00000368046 CFHR5Q9BXR6 569 aa11.93□□□□□ -0.5
CD48-202ENST00000368046 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.93□□□□□ -0.5
CD48-202ENST00000368046 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.93□□□□□ -0.5
CD48-202ENST00000368046 HERC5Q9UII4 1024 aaKnown RBP11.93□□□□□ -0.5
CD48-202ENST00000368046 TTC41PQ6P2S7 1318 aa11.92□□□□□ -0.5
CD48-202ENST00000368046 MYH2Q9UKX2 1941 aa11.92□□□□□ -0.5
CD48-202ENST00000368046 TCRBV5S4A2TA0A5A2 114 aa11.92□□□□□ -0.5
CD48-202ENST00000368046 IRF6O14896 467 aa11.92□□□□□ -0.5
CD48-202ENST00000368046 ERC2O15083 957 aa11.92□□□□□ -0.5
CD48-202ENST00000368046 TBC1D8O95759 1140 aa11.92□□□□□ -0.5
CD48-202ENST00000368046 ADD2P35612 726 aa11.92□□□□□ -0.5
CD48-202ENST00000368046 USP5P45974 858 aa11.92□□□□□ -0.5
CD48-202ENST00000368046 VASPP50552 380 aaPredicted RBP11.92□□□□□ -0.5
CD48-202ENST00000368046 PPIL2Q13356 520 aa11.92□□□□□ -0.5
CD48-202ENST00000368046 UBE3CQ15386 1083 aa11.92□□□□□ -0.5
CD48-202ENST00000368046 METTL16Q86W50 562 aaKnown RBP11.92□□□□□ -0.5
CD48-202ENST00000368046 TNS4Q8IZW8 715 aa11.92□□□□□ -0.5
CD48-202ENST00000368046 PTPN18Q99952 460 aa11.92□□□□□ -0.5
CD48-202ENST00000368046 FLT1P17948 1338 aa11.91□□□□□ -0.5
CD48-202ENST00000368046 COL2A1P02458 1487 aaPredicted RBP11.91□□□□□ -0.5
CD48-202ENST00000368046 IGF2BP3O00425 579 aaKnown RBP eCLIP11.91□□□□□ -0.5
CD48-202ENST00000368046 CXCL11O14625 94 aa11.91□□□□□ -0.5
CD48-202ENST00000368046 IGHDP01880 384 aa11.91□□□□□ -0.5
CD48-202ENST00000368046 SLURP2P0DP57 97 aa11.91□□□□□ -0.5
CD48-202ENST00000368046 CETPP11597 493 aa11.91□□□□□ -0.5
CD48-202ENST00000368046 SNAPC2Q13487 334 aa11.91□□□□□ -0.5
CD48-202ENST00000368046 NOM1Q5C9Z4 860 aaKnown RBP11.91□□□□□ -0.5
CD48-202ENST00000368046 SMC5Q8IY18 1101 aa11.91□□□□□ -0.5
CD48-202ENST00000368046 SCYL3Q8IZE3 742 aa11.91□□□□□ -0.5
CD48-202ENST00000368046 CRNKL1Q9BZJ0 848 aaKnown RBP11.91□□□□□ -0.5
CD48-202ENST00000368046 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.91□□□□□ -0.5
CD48-202ENST00000368046 PALD1Q9ULE6 856 aa11.91□□□□□ -0.5
CD48-202ENST00000368046 ZHX2Q9Y6X8 837 aa11.91□□□□□ -0.5
CD48-202ENST00000368046 CCL15-CCL14A0A0B4J2E2 113 aa11.9□□□□□ -0.5
CD48-202ENST00000368046 GLRX3O76003 335 aaKnown RBP11.9□□□□□ -0.5
CD48-202ENST00000368046 HLA-DOAP06340 250 aa11.9□□□□□ -0.5
CD48-202ENST00000368046 PTPRAP18433 802 aa11.9□□□□□ -0.5
CD48-202ENST00000368046 MX1P20591 662 aa11.9□□□□□ -0.5
CD48-202ENST00000368046 CAP2P40123 477 aa11.9□□□□□ -0.5
CD48-202ENST00000368046 CCL15Q16663 113 aa11.9□□□□□ -0.5
CD48-202ENST00000368046 TTC6Q86TZ1 520 aa11.9□□□□□ -0.5
CD48-202ENST00000368046 KBTBD3Q8NAB2 608 aa11.9□□□□□ -0.5
CD48-202ENST00000368046 BRI3BPQ8WY22 251 aa11.9□□□□□ -0.5
CD48-202ENST00000368046 PICK1Q9NRD5 415 aa11.9□□□□□ -0.5
CD48-202ENST00000368046 KCNH4Q9UQ05 1017 aa11.9□□□□□ -0.5
CD48-202ENST00000368046 GPR25O00155 361 aa11.89□□□□□ -0.51
CD48-202ENST00000368046 LRRFIP1Q32MZ4 808 aaKnown RBP11.89□□□□□ -0.51
CD48-202ENST00000368046 TSHZ3Q63HK5 1081 aa11.89□□□□□ -0.51
CD48-202ENST00000368046 CRACR2BQ8N4Y2 399 aaPredicted RBP11.89□□□□□ -0.51
CD48-202ENST00000368046 PI4K2BQ8TCG2 481 aa11.89□□□□□ -0.51
CD48-202ENST00000368046 OTUD7AQ8TE49 926 aaPredicted RBP11.89□□□□□ -0.51
CD48-202ENST00000368046 TRIM34Q9BYJ4 488 aa11.89□□□□□ -0.51
CD48-202ENST00000368046 OCEL1Q9H607 264 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms