RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 APOBRQ0VD83 1088 aa13.19□□□□□ -0.3
PRKN-206ENST00000366898 PPFIA1Q13136 1202 aa13.19□□□□□ -0.3
PRKN-206ENST00000366898 Q6ZUG5 572 aa13.19□□□□□ -0.3
PRKN-206ENST00000366898 CADPS2Q86UW7 1296 aa13.19□□□□□ -0.3
PRKN-206ENST00000366898 MED4Q9NPJ6 270 aa13.19□□□□□ -0.3
PRKN-206ENST00000366898 ZDHHC9Q9Y397 364 aa13.19□□□□□ -0.3
PRKN-206ENST00000366898 AGLP35573 1532 aa13.19□□□□□ -0.3
PRKN-206ENST00000366898 LRRD1A4D1F6 860 aa13.19□□□□□ -0.3
PRKN-206ENST00000366898 HOXB7P09629 217 aa13.19□□□□□ -0.3
PRKN-206ENST00000366898 SYKP43405 635 aa13.19□□□□□ -0.3
PRKN-206ENST00000366898 CCDC82Q8N4S0 544 aa13.19□□□□□ -0.3
PRKN-206ENST00000366898 CEP170BQ9Y4F5 1589 aaPredicted RBP13.19□□□□□ -0.3
PRKN-206ENST00000366898 USP32Q8NFA0 1604 aa13.19□□□□□ -0.3
PRKN-206ENST00000366898 CDK5RAP3Q96JB5 506 aa13.19□□□□□ -0.3
PRKN-206ENST00000366898 NAPGQ99747 312 aaPredicted RBP13.19□□□□□ -0.3
PRKN-206ENST00000366898 METTL22Q9BUU2 404 aaPredicted RBP13.19□□□□□ -0.3
PRKN-206ENST00000366898 SLC27A2O14975 620 aa13.18□□□□□ -0.3
PRKN-206ENST00000366898 CTIFO43310 598 aaKnown RBP13.18□□□□□ -0.3
PRKN-206ENST00000366898 STX17P56962 302 aa13.18□□□□□ -0.3
PRKN-206ENST00000366898 ATP11AP98196 1134 aa13.18□□□□□ -0.3
PRKN-206ENST00000366898 MTX1Q13505 466 aa13.18□□□□□ -0.3
PRKN-206ENST00000366898 SLFNL1Q499Z3 407 aa13.18□□□□□ -0.3
PRKN-206ENST00000366898 CC2D1AQ6P1N0 951 aaPredicted RBP13.18□□□□□ -0.3
PRKN-206ENST00000366898 TTLL7Q6ZT98 887 aa13.18□□□□□ -0.3
PRKN-206ENST00000366898 FAM89AQ96GI7 184 aa13.18□□□□□ -0.3
PRKN-206ENST00000366898 LSG1Q9H089 658 aaKnown RBP13.18□□□□□ -0.3
PRKN-206ENST00000366898 ARHGAP6O43182 974 aa13.18□□□□□ -0.3
PRKN-206ENST00000366898 ME3Q16798 604 aa13.18□□□□□ -0.3
PRKN-206ENST00000366898 FAM114A1Q8IWE2 563 aa13.18□□□□□ -0.3
PRKN-206ENST00000366898 CCDC144CPQ8IYA2 1237 aa13.18□□□□□ -0.3
PRKN-206ENST00000366898 SAMD15Q9P1V8 674 aa13.18□□□□□ -0.3
PRKN-206ENST00000366898 CCDC151A5D8V7 595 aa13.18□□□□□ -0.3
PRKN-206ENST00000366898 MYO1BO43795 1136 aa13.18□□□□□ -0.3
PRKN-206ENST00000366898 GOLGA8FQ08AF8 430 aa13.18□□□□□ -0.3
PRKN-206ENST00000366898 GOLGA8DPQ0D2H9 430 aa13.18□□□□□ -0.3
PRKN-206ENST00000366898 EPHA10Q5JZY3 1008 aa13.18□□□□□ -0.3
PRKN-206ENST00000366898 ABTB1Q969K4 478 aaPredicted RBP13.18□□□□□ -0.3
PRKN-206ENST00000366898 DCAF5Q96JK2 942 aa13.18□□□□□ -0.3
PRKN-206ENST00000366898 PSMB7Q99436 277 aa13.18□□□□□ -0.3
PRKN-206ENST00000366898 LUC7L2Q9Y383 392 aaKnown RBP13.18□□□□□ -0.3
PRKN-206ENST00000366898 ADAMTS2O95450 1211 aa13.17□□□□□ -0.3
PRKN-206ENST00000366898 PHKG2P15735 406 aa13.17□□□□□ -0.3
PRKN-206ENST00000366898 ADKP55263 362 aaKnown RBP13.17□□□□□ -0.3
PRKN-206ENST00000366898 PDE1CQ14123 709 aaPredicted RBP13.17□□□□□ -0.3
PRKN-206ENST00000366898 KRT32Q14532 448 aa13.17□□□□□ -0.3
PRKN-206ENST00000366898 CCDC102BQ68D86 513 aa13.17□□□□□ -0.3
PRKN-206ENST00000366898 HELBQ8NG08 1087 aaPredicted RBP13.17□□□□□ -0.3
PRKN-206ENST00000366898 TSC22D3Q99576 134 aa13.17□□□□□ -0.3
PRKN-206ENST00000366898 KCNF1Q9H3M0 494 aa13.17□□□□□ -0.3
PRKN-206ENST00000366898 MTMR7Q9Y216 660 aa13.17□□□□□ -0.3
PRKN-206ENST00000366898 AK9Q5TCS8 1911 aa13.17□□□□□ -0.3
PRKN-206ENST00000366898 NR1I2O75469 434 aa13.17□□□□□ -0.3
PRKN-206ENST00000366898 CHGBP05060 677 aa13.17□□□□□ -0.3
PRKN-206ENST00000366898 SEPT6Q14141 434 aa13.17□□□□□ -0.3
PRKN-206ENST00000366898 TNNI3KQ59H18 835 aa13.17□□□□□ -0.3
PRKN-206ENST00000366898 ZBTB10Q96DT7 871 aa13.17□□□□□ -0.3
PRKN-206ENST00000366898 FPGT-TNNI3KV9GXZ4 949 aa13.17□□□□□ -0.3
PRKN-206ENST00000366898 JAK2O60674 1132 aa13.17□□□□□ -0.3
PRKN-206ENST00000366898 CAND2O75155 1236 aa13.17□□□□□ -0.3
PRKN-206ENST00000366898 SASH1O94885 1247 aa13.17□□□□□ -0.3
PRKN-206ENST00000366898 ZFYP08048 801 aaPredicted RBP13.17□□□□□ -0.3
PRKN-206ENST00000366898 CCDC96Q2M329 555 aa13.17□□□□□ -0.3
PRKN-206ENST00000366898 TDRD12Q587J7 1177 aaKnown RBP13.17□□□□□ -0.3
PRKN-206ENST00000366898 HIBCHQ6NVY1 386 aaPredicted RBP13.17□□□□□ -0.3
PRKN-206ENST00000366898 SKAP2O75563 359 aaPredicted RBP13.17□□□□□ -0.3
PRKN-206ENST00000366898 IFIT5Q13325 482 aaKnown RBP13.17□□□□□ -0.3
PRKN-206ENST00000366898 MUM1L1Q5H9M0 696 aa13.17□□□□□ -0.3
PRKN-206ENST00000366898 VCXQ9H320 206 aa13.17□□□□□ -0.3
PRKN-206ENST00000366898 KIF20BQ96Q89 1820 aa13.16□□□□□ -0.3
PRKN-206ENST00000366898 LDHAL6AQ6ZMR3 332 aa13.16□□□□□ -0.3
PRKN-206ENST00000366898 ARMC9Q7Z3E5 817 aa13.16□□□□□ -0.3
PRKN-206ENST00000366898 DDX27Q96GQ7 796 aaKnown RBP13.16□□□□□ -0.3
PRKN-206ENST00000366898 RBM6P78332 1123 aaKnown RBP13.16□□□□□ -0.3
PRKN-206ENST00000366898 BICDL1Q6ZP65 573 aa13.16□□□□□ -0.3
PRKN-206ENST00000366898 ZNF589Q86UQ0 364 aaPredicted RBP13.16□□□□□ -0.3
PRKN-206ENST00000366898 PACS2Q86VP3 889 aa13.16□□□□□ -0.3
PRKN-206ENST00000366898 LEO1Q8WVC0 666 aaPredicted RBP13.16□□□□□ -0.3
PRKN-206ENST00000366898 GBP5Q96PP8 586 aa13.16□□□□□ -0.3
PRKN-206ENST00000366898 FAM167BQ9BTA0 163 aa13.16□□□□□ -0.3
PRKN-206ENST00000366898 ZSCAN16Q9H4T2 348 aaPredicted RBP13.16□□□□□ -0.3
PRKN-206ENST00000366898 NCOA5Q9HCD5 579 aaKnown RBP13.16□□□□□ -0.3
PRKN-206ENST00000366898 ABCB6Q9NP58 842 aa13.16□□□□□ -0.3
PRKN-206ENST00000366898 IMPACTQ9P2X3 320 aa13.16□□□□□ -0.3
PRKN-206ENST00000366898 TRMT112Q9UI30 125 aaKnown RBP13.16□□□□□ -0.3
PRKN-206ENST00000366898 SPATA31D1Q6ZQQ2 1576 aa13.16□□□□□ -0.3
PRKN-206ENST00000366898 AKR1B10O60218 316 aa13.16□□□□□ -0.3
PRKN-206ENST00000366898 HMGB1P09429 215 aaKnown RBP13.16□□□□□ -0.3
PRKN-206ENST00000366898 RNASE9P60153 205 aaKnown RBP13.16□□□□□ -0.3
PRKN-206ENST00000366898 CASP8Q14790 479 aa13.16□□□□□ -0.3
PRKN-206ENST00000366898 VPS53Q5VIR6 699 aa13.16□□□□□ -0.3
PRKN-206ENST00000366898 CDC37L1Q7L3B6 337 aa13.16□□□□□ -0.3
PRKN-206ENST00000366898 VPS37DQ86XT2 251 aa13.16□□□□□ -0.3
PRKN-206ENST00000366898 THOC1Q96FV9 657 aaKnown RBP13.16□□□□□ -0.3
PRKN-206ENST00000366898 POLA2Q14181 598 aa13.15□□□□□ -0.3
PRKN-206ENST00000366898 TTC6Q86TZ1 520 aa13.15□□□□□ -0.3
PRKN-206ENST00000366898 CEP120Q8N960 986 aa13.15□□□□□ -0.3
PRKN-206ENST00000366898 EHBP1Q8NDI1 1231 aa13.15□□□□□ -0.3
PRKN-206ENST00000366898 STAG1Q8WVM7 1258 aa13.15□□□□□ -0.3
PRKN-206ENST00000366898 TPCN1Q9ULQ1 816 aa13.15□□□□□ -0.3
PRKN-206ENST00000366898 TBC1D2BQ9UPU7 963 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms