RNA–Protein interactions for RNA: ENST00000366815.7

H3F3A-203, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-203ENST00000366815 SREBF2Q12772 1141 aa13.8□□□□□ -0.2
H3F3A-203ENST00000366815 HHIPL2Q6UWX4 724 aa13.8□□□□□ -0.2
H3F3A-203ENST00000366815 NUDT18Q6ZVK8 323 aa13.8□□□□□ -0.2
H3F3A-203ENST00000366815 FRAT1Q92837 279 aaPredicted RBP13.8□□□□□ -0.2
H3F3A-203ENST00000366815 SLC10A4Q96EP9 437 aa13.8□□□□□ -0.2
H3F3A-203ENST00000366815 TMEM39BQ9GZU3 492 aa13.8□□□□□ -0.2
H3F3A-203ENST00000366815 SRGAP3O43295 1099 aa13.79□□□□□ -0.2
H3F3A-203ENST00000366815 RNF40O75150 1001 aa13.79□□□□□ -0.2
H3F3A-203ENST00000366815 TBC1D8O95759 1140 aa13.79□□□□□ -0.2
H3F3A-203ENST00000366815 ADORA1P30542 326 aa13.79□□□□□ -0.2
H3F3A-203ENST00000366815 GJA5P36382 358 aa13.79□□□□□ -0.2
H3F3A-203ENST00000366815 PHKA1P46020 1223 aa13.79□□□□□ -0.2
H3F3A-203ENST00000366815 IREB2P48200 963 aaKnown RBP13.79□□□□□ -0.2
H3F3A-203ENST00000366815 TNNI2P48788 182 aa13.79□□□□□ -0.2
H3F3A-203ENST00000366815 CACNB3P54284 484 aa13.79□□□□□ -0.2
H3F3A-203ENST00000366815 NOM1Q5C9Z4 860 aaKnown RBP13.79□□□□□ -0.2
H3F3A-203ENST00000366815 ANKRD13AQ8IZ07 590 aa13.79□□□□□ -0.2
H3F3A-203ENST00000366815 CLUAP1Q96AJ1 413 aa13.79□□□□□ -0.2
H3F3A-203ENST00000366815 CFHR5Q9BXR6 569 aa13.79□□□□□ -0.2
H3F3A-203ENST00000366815 MANSC4A6NHS7 340 aaPredicted RBP13.78□□□□□ -0.2
H3F3A-203ENST00000366815 PRDX5P30044 214 aa13.78□□□□□ -0.2
H3F3A-203ENST00000366815 FKBP1CQ5VVH2 108 aa13.78□□□□□ -0.2
H3F3A-203ENST00000366815 ZKSCAN2Q63HK3 967 aa13.78□□□□□ -0.2
H3F3A-203ENST00000366815 FAM83AQ86UY5 434 aa13.78□□□□□ -0.2
H3F3A-203ENST00000366815 ADGRG1Q9Y653 693 aa13.78□□□□□ -0.2
H3F3A-203ENST00000366815 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.78□□□□□ -0.2
H3F3A-203ENST00000366815 SALL1Q9NSC2 1324 aa13.78□□□□□ -0.2
H3F3A-203ENST00000366815 CCDC85CA6NKD9 419 aa13.77□□□□□ -0.21
H3F3A-203ENST00000366815 GNAI2P04899 355 aa13.77□□□□□ -0.21
H3F3A-203ENST00000366815 INHBEP58166 350 aa13.77□□□□□ -0.21
H3F3A-203ENST00000366815 CCDC102BQ68D86 513 aa13.77□□□□□ -0.21
H3F3A-203ENST00000366815 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.77□□□□□ -0.21
H3F3A-203ENST00000366815 TMEM57Q8N5G2 664 aa13.77□□□□□ -0.21
H3F3A-203ENST00000366815 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.77□□□□□ -0.21
H3F3A-203ENST00000366815 ZNF296Q8WUU4 475 aaPredicted RBP13.77□□□□□ -0.21
H3F3A-203ENST00000366815 RPAP1Q9BWH6 1393 aaPredicted RBP13.77□□□□□ -0.21
H3F3A-203ENST00000366815 R3HDMLQ9H3Y0 253 aa13.77□□□□□ -0.21
H3F3A-203ENST00000366815 GNL3LQ9NVN8 582 aaKnown RBP13.77□□□□□ -0.21
H3F3A-203ENST00000366815 MYH2Q9UKX2 1941 aa13.77□□□□□ -0.21
H3F3A-203ENST00000366815 DENND2AQ9ULE3 1009 aa13.77□□□□□ -0.21
H3F3A-203ENST00000366815 DAGLAQ9Y4D2 1042 aa13.77□□□□□ -0.21
H3F3A-203ENST00000366815 PDS5AQ29RF7 1337 aaKnown RBP13.76□□□□□ -0.21
H3F3A-203ENST00000366815 ZBED9Q6R2W3 1325 aa13.76□□□□□ -0.21
H3F3A-203ENST00000366815 PNMA6EA0A0J9YXQ4 647 aa13.76□□□□□ -0.21
H3F3A-203ENST00000366815 A0A1B0GUL7 405 aa13.76□□□□□ -0.21
H3F3A-203ENST00000366815 GPR25O00155 361 aa13.76□□□□□ -0.21
H3F3A-203ENST00000366815 IGF2BP3O00425 579 aaKnown RBP eCLIP13.76□□□□□ -0.21
H3F3A-203ENST00000366815 IRF6O14896 467 aa13.76□□□□□ -0.21
H3F3A-203ENST00000366815 OATP04181 439 aa13.76□□□□□ -0.21
H3F3A-203ENST00000366815 TIMM10P62072 90 aa13.76□□□□□ -0.21
H3F3A-203ENST00000366815 TFCP2Q12800 502 aa13.76□□□□□ -0.21
H3F3A-203ENST00000366815 DIXDC1Q155Q3 683 aa13.76□□□□□ -0.21
H3F3A-203ENST00000366815 CTU1Q7Z7A3 348 aaKnown RBP13.76□□□□□ -0.21
H3F3A-203ENST00000366815 TMOD2Q9NZR1 351 aa13.76□□□□□ -0.21
H3F3A-203ENST00000366815 ALDH1A1P00352 501 aa13.75□□□□□ -0.21
H3F3A-203ENST00000366815 LDHBP07195 334 aaKnown RBP13.75□□□□□ -0.21
H3F3A-203ENST00000366815 RASGRF1Q13972 1273 aa13.75□□□□□ -0.21
H3F3A-203ENST00000366815 VGLL4Q14135 290 aa13.75□□□□□ -0.21
H3F3A-203ENST00000366815 ELP3Q9H9T3 547 aa13.75□□□□□ -0.21
H3F3A-203ENST00000366815 AKAP2Q9Y2D5 859 aa13.75□□□□□ -0.21
H3F3A-203ENST00000366815 RGS19P49795 217 aa13.74□□□□□ -0.21
H3F3A-203ENST00000366815 CDC42EP5Q6NZY7 148 aa13.74□□□□□ -0.21
H3F3A-203ENST00000366815 OPTNQ96CV9 577 aa13.74□□□□□ -0.21
H3F3A-203ENST00000366815 XAGE2Q96GT9 111 aa13.74□□□□□ -0.21
H3F3A-203ENST00000366815 GAKO14976 1311 aa13.73□□□□□ -0.21
H3F3A-203ENST00000366815 AK9Q5TCS8 1911 aa13.73□□□□□ -0.21
H3F3A-203ENST00000366815 RLBP1P12271 317 aa13.73□□□□□ -0.21
H3F3A-203ENST00000366815 NFIAQ12857 509 aa13.73□□□□□ -0.21
H3F3A-203ENST00000366815 MVPQ14764 893 aaKnown RBP13.73□□□□□ -0.21
H3F3A-203ENST00000366815 TJAP1Q5JTD0 557 aa13.73□□□□□ -0.21
H3F3A-203ENST00000366815 ZGPATQ8N5A5 531 aaKnown RBP13.73□□□□□ -0.21
H3F3A-203ENST00000366815 FAM151AQ8WW52 585 aa13.73□□□□□ -0.21
H3F3A-203ENST00000366815 PTPN18Q99952 460 aa13.73□□□□□ -0.21
H3F3A-203ENST00000366815 DOCK2Q92608 1830 aa13.73□□□□□ -0.21
H3F3A-203ENST00000366815 RFX7Q2KHR2 1363 aa13.72□□□□□ -0.21
H3F3A-203ENST00000366815 FKTNO75072 461 aa13.72□□□□□ -0.21
H3F3A-203ENST00000366815 SSH3Q8TE77 659 aa13.72□□□□□ -0.21
H3F3A-203ENST00000366815 HOOK2Q96ED9 719 aa13.72□□□□□ -0.21
H3F3A-203ENST00000366815 CSADQ9Y600 493 aa13.72□□□□□ -0.21
H3F3A-203ENST00000366815 SNCAIPQ9Y6H5 919 aa13.72□□□□□ -0.21
H3F3A-203ENST00000366815 SPDYE5A6NIY4 337 aa13.71□□□□□ -0.21
H3F3A-203ENST00000366815 ATP8B2P98198 1209 aa13.71□□□□□ -0.21
H3F3A-203ENST00000366815 G3BP1Q13283 466 aaKnown RBP eCLIP13.71□□□□□ -0.21
H3F3A-203ENST00000366815 PKN2Q16513 984 aaKnown RBP13.71□□□□□ -0.21
H3F3A-203ENST00000366815 METTL3Q86U44 580 aaKnown RBP13.71□□□□□ -0.21
H3F3A-203ENST00000366815 NEUROD6Q96NK8 337 aa13.71□□□□□ -0.21
H3F3A-203ENST00000366815 WRNIP1Q96S55 665 aa13.71□□□□□ -0.21
H3F3A-203ENST00000366815 MTRQ99707 1265 aa13.71□□□□□ -0.21
H3F3A-203ENST00000366815 USP40Q9NVE5 1235 aa13.71□□□□□ -0.21
H3F3A-203ENST00000366815 HMG20BQ9P0W2 317 aa13.71□□□□□ -0.21
H3F3A-203ENST00000366815 ZBTB7BO15156 539 aaPredicted RBP13.7□□□□□ -0.22
H3F3A-203ENST00000366815 ARID4AP29374 1257 aaPredicted RBP13.7□□□□□ -0.22
H3F3A-203ENST00000366815 TCP10Q12799 353 aa13.7□□□□□ -0.22
H3F3A-203ENST00000366815 CRHR2Q13324 411 aa13.7□□□□□ -0.22
H3F3A-203ENST00000366815 DCAF15Q66K64 600 aa13.7□□□□□ -0.22
H3F3A-203ENST00000366815 MIGA2Q7L4E1 593 aa13.7□□□□□ -0.22
H3F3A-203ENST00000366815 ERO1BQ86YB8 467 aa13.7□□□□□ -0.22
H3F3A-203ENST00000366815 FTSJ3Q8IY81 847 aaKnown RBP13.7□□□□□ -0.22
H3F3A-203ENST00000366815 PXYLP1Q8TE99 480 aa13.7□□□□□ -0.22
H3F3A-203ENST00000366815 ZNF384Q8TF68 577 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms