RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 COL9A1P20849 921 aa10.79□□□□□ -0.68
HMGB1P39-201ENST00000366304 WDR43Q15061 677 aaKnown RBP eCLIP10.79□□□□□ -0.68
HMGB1P39-201ENST00000366304 DIXDC1Q155Q3 683 aa10.79□□□□□ -0.68
HMGB1P39-201ENST00000366304 BEND3Q5T5X7 828 aa10.79□□□□□ -0.68
HMGB1P39-201ENST00000366304 CDC42EP5Q6NZY7 148 aa10.79□□□□□ -0.68
HMGB1P39-201ENST00000366304 GADL1Q6ZQY3 521 aa10.79□□□□□ -0.68
HMGB1P39-201ENST00000366304 SH3BP5LQ7L8J4 393 aa10.79□□□□□ -0.68
HMGB1P39-201ENST00000366304 HOOK2Q96ED9 719 aa10.79□□□□□ -0.68
HMGB1P39-201ENST00000366304 STK31Q9BXU1 1019 aa10.79□□□□□ -0.68
HMGB1P39-201ENST00000366304 MYBBP1AQ9BQG0 1328 aaKnown RBP10.79□□□□□ -0.68
HMGB1P39-201ENST00000366304 PEX10O60683 326 aa10.78□□□□□ -0.68
HMGB1P39-201ENST00000366304 HMGCRP04035 888 aa10.78□□□□□ -0.68
HMGB1P39-201ENST00000366304 FKBP5Q13451 457 aaPredicted RBP10.78□□□□□ -0.68
HMGB1P39-201ENST00000366304 CCDC57Q2TAC2 916 aa10.78□□□□□ -0.68
HMGB1P39-201ENST00000366304 TWISTNBQ3B726 338 aaPredicted RBP10.78□□□□□ -0.68
HMGB1P39-201ENST00000366304 LRRC24Q50LG9 513 aa10.78□□□□□ -0.68
HMGB1P39-201ENST00000366304 MAP3K21Q5TCX8 1036 aa10.78□□□□□ -0.68
HMGB1P39-201ENST00000366304 HHIPL2Q6UWX4 724 aa10.78□□□□□ -0.68
HMGB1P39-201ENST00000366304 VGLL2Q8N8G2 317 aa10.78□□□□□ -0.68
HMGB1P39-201ENST00000366304 MAFAQ8NHW3 353 aaPredicted RBP10.78□□□□□ -0.68
HMGB1P39-201ENST00000366304 TRIB2Q92519 343 aa10.78□□□□□ -0.68
HMGB1P39-201ENST00000366304 TMOD2Q9NZR1 351 aa10.78□□□□□ -0.68
HMGB1P39-201ENST00000366304 DAGLAQ9Y4D2 1042 aa10.78□□□□□ -0.68
HMGB1P39-201ENST00000366304 DOCK3Q8IZD9 2030 aa10.78□□□□□ -0.68
HMGB1P39-201ENST00000366304 DNAH12Q6ZR08 3092 aa10.77□□□□□ -0.68
HMGB1P39-201ENST00000366304 PPP1R37O75864 691 aa10.77□□□□□ -0.69
HMGB1P39-201ENST00000366304 TAF7LQ5H9L4 462 aa10.77□□□□□ -0.69
HMGB1P39-201ENST00000366304 FASTKD5Q7L8L6 764 aaKnown RBP10.77□□□□□ -0.69
HMGB1P39-201ENST00000366304 SCYL3Q8IZE3 742 aa10.77□□□□□ -0.69
HMGB1P39-201ENST00000366304 TBC1D22AQ8WUA7 517 aa10.77□□□□□ -0.69
HMGB1P39-201ENST00000366304 COA7Q96BR5 231 aa10.77□□□□□ -0.69
HMGB1P39-201ENST00000366304 TTYH1Q9H313 450 aaPredicted RBP10.77□□□□□ -0.69
HMGB1P39-201ENST00000366304 SLC45A1Q9Y2W3 748 aa10.77□□□□□ -0.69
HMGB1P39-201ENST00000366304 PLXNB2O15031 1838 aa10.77□□□□□ -0.69
HMGB1P39-201ENST00000366304 TRIM75PA6NK02 468 aa10.76□□□□□ -0.69
HMGB1P39-201ENST00000366304 SMCR8Q8TEV9 937 aaPredicted RBP10.76□□□□□ -0.69
HMGB1P39-201ENST00000366304 MYLIPQ8WY64 445 aa10.76□□□□□ -0.69
HMGB1P39-201ENST00000366304 SUCLG2Q96I99 432 aa10.76□□□□□ -0.69
HMGB1P39-201ENST00000366304 SEMA6BQ9H3T3 888 aa10.76□□□□□ -0.69
HMGB1P39-201ENST00000366304 HMX1Q9NP08 348 aaPredicted RBP10.76□□□□□ -0.69
HMGB1P39-201ENST00000366304 BDP1A6H8Y1 2624 aa10.75□□□□□ -0.69
HMGB1P39-201ENST00000366304 PHIPQ8WWQ0 1821 aa10.75□□□□□ -0.69
HMGB1P39-201ENST00000366304 GRM8O00222 908 aa10.75□□□□□ -0.69
HMGB1P39-201ENST00000366304 MAP3K10Q02779 954 aa10.75□□□□□ -0.69
HMGB1P39-201ENST00000366304 CALD1Q05682 793 aaKnown RBP10.75□□□□□ -0.69
HMGB1P39-201ENST00000366304 FAM110CQ1W6H9 321 aa10.75□□□□□ -0.69
HMGB1P39-201ENST00000366304 LCE2DQ5TA82 110 aaPredicted RBP10.75□□□□□ -0.69
HMGB1P39-201ENST00000366304 TMEM92Q6UXU6 159 aa10.75□□□□□ -0.69
HMGB1P39-201ENST00000366304 AGTPBP1Q9UPW5 1226 aa10.75□□□□□ -0.69
HMGB1P39-201ENST00000366304 RFX7Q2KHR2 1363 aa10.75□□□□□ -0.69
HMGB1P39-201ENST00000366304 PTPRFP10586 1907 aa10.74□□□□□ -0.69
HMGB1P39-201ENST00000366304 DDTLA6NHG4 134 aaPredicted RBP10.74□□□□□ -0.69
HMGB1P39-201ENST00000366304 FRAT2O75474 233 aaPredicted RBP10.74□□□□□ -0.69
HMGB1P39-201ENST00000366304 PRDX5P30044 214 aa10.74□□□□□ -0.69
HMGB1P39-201ENST00000366304 CCND3P30281 292 aaPredicted RBP10.74□□□□□ -0.69
HMGB1P39-201ENST00000366304 C9orf50Q5SZB4 431 aa10.74□□□□□ -0.69
HMGB1P39-201ENST00000366304 VPS37DQ86XT2 251 aa10.74□□□□□ -0.69
HMGB1P39-201ENST00000366304 USP38Q8NB14 1042 aa10.74□□□□□ -0.69
HMGB1P39-201ENST00000366304 KLHDC4Q8TBB5 520 aa10.74□□□□□ -0.69
HMGB1P39-201ENST00000366304 PICK1Q9NRD5 415 aa10.74□□□□□ -0.69
HMGB1P39-201ENST00000366304 USP40Q9NVE5 1235 aa10.74□□□□□ -0.69
HMGB1P39-201ENST00000366304 SUGT1Q9Y2Z0 365 aa10.74□□□□□ -0.69
HMGB1P39-201ENST00000366304 MROH5Q6ZUA9 1318 aa10.74□□□□□ -0.69
HMGB1P39-201ENST00000366304 CYP2B6P20813 491 aa10.73□□□□□ -0.69
HMGB1P39-201ENST00000366304 FGFR2P21802 821 aa10.73□□□□□ -0.69
HMGB1P39-201ENST00000366304 RGS3P49796 1198 aa10.73□□□□□ -0.69
HMGB1P39-201ENST00000366304 CACNB2Q08289 660 aaPredicted RBP10.73□□□□□ -0.69
HMGB1P39-201ENST00000366304 RRP1BQ14684 758 aaKnown RBP10.73□□□□□ -0.69
HMGB1P39-201ENST00000366304 SHHQ15465 462 aa10.73□□□□□ -0.69
HMGB1P39-201ENST00000366304 CCL14Q16627 93 aa10.73□□□□□ -0.69
HMGB1P39-201ENST00000366304 ZNF697Q5TEC3 545 aa10.73□□□□□ -0.69
HMGB1P39-201ENST00000366304 POTEEQ6S8J3 1075 aa10.73□□□□□ -0.69
HMGB1P39-201ENST00000366304 ANKRD44Q8N8A2 993 aa10.73□□□□□ -0.69
HMGB1P39-201ENST00000366304 CHMP4AQ9BY43 222 aa10.73□□□□□ -0.69
HMGB1P39-201ENST00000366304 DDX4Q9NQI0 724 aaKnown RBP10.73□□□□□ -0.69
HMGB1P39-201ENST00000366304 FAM196BA6NMK8 535 aa10.72□□□□□ -0.69
HMGB1P39-201ENST00000366304 VAMP4O75379 141 aa10.72□□□□□ -0.69
HMGB1P39-201ENST00000366304 PDE8BO95263 885 aa10.72□□□□□ -0.69
HMGB1P39-201ENST00000366304 NBPF7P0C2Y1 421 aaPredicted RBP10.72□□□□□ -0.69
HMGB1P39-201ENST00000366304 CAVIN4Q5BKX8 364 aa10.72□□□□□ -0.69
HMGB1P39-201ENST00000366304 METTL24Q5JXM2 366 aa10.72□□□□□ -0.69
HMGB1P39-201ENST00000366304 ASCC2Q9H1I8 757 aaPredicted RBP10.72□□□□□ -0.69
HMGB1P39-201ENST00000366304 TXNRD2Q9NNW7 524 aa10.72□□□□□ -0.69
HMGB1P39-201ENST00000366304 MAST3O60307 1309 aa10.72□□□□□ -0.69
HMGB1P39-201ENST00000366304 SNPHO15079 494 aa10.71□□□□□ -0.69
HMGB1P39-201ENST00000366304 USP6NLQ92738 828 aa10.71□□□□□ -0.69
HMGB1P39-201ENST00000366304 MORF4L1Q9UBU8 362 aa10.71□□□□□ -0.69
HMGB1P39-201ENST00000366304 TNFRSF10AO00220 468 aa10.7□□□□□ -0.7
HMGB1P39-201ENST00000366304 ST18O60284 1047 aa10.7□□□□□ -0.7
HMGB1P39-201ENST00000366304 CTNND1O60716 968 aaKnown RBP10.7□□□□□ -0.7
HMGB1P39-201ENST00000366304 PLA2G5P39877 138 aa10.7□□□□□ -0.7
HMGB1P39-201ENST00000366304 HMGCS2P54868 508 aa10.7□□□□□ -0.7
HMGB1P39-201ENST00000366304 RABL6Q3YEC7 729 aaPredicted RBP10.7□□□□□ -0.7
HMGB1P39-201ENST00000366304 WWC1Q8IX03 1113 aa10.7□□□□□ -0.7
HMGB1P39-201ENST00000366304 IDI2Q9BXS1 227 aa10.7□□□□□ -0.7
HMGB1P39-201ENST00000366304 BICC1Q9H694 974 aaKnown RBP10.7□□□□□ -0.7
HMGB1P39-201ENST00000366304 DOCK1Q14185 1865 aa10.7□□□□□ -0.7
HMGB1P39-201ENST00000366304 LTBP2Q14767 1821 aa10.7□□□□□ -0.7
HMGB1P39-201ENST00000366304 DOCK2Q92608 1830 aa10.7□□□□□ -0.7
HMGB1P39-201ENST00000366304 LOC285556D6RIA3 1793 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms