RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 GIMAP7Q8NHV1 300 aa7.94□□□□□ -1.14
RNU4-28P-201ENST00000364739 MIR1-1HGQ9H1L0 117 aa7.94□□□□□ -1.14
RNU4-28P-201ENST00000364739 COPRSQ9NQ92 184 aa7.94□□□□□ -1.14
RNU4-28P-201ENST00000364739 ADAMTS4O75173 837 aa7.93□□□□□ -1.14
RNU4-28P-201ENST00000364739 PF4P02776 101 aa7.93□□□□□ -1.14
RNU4-28P-201ENST00000364739 GBP2P32456 591 aaPredicted RBP7.93□□□□□ -1.14
RNU4-28P-201ENST00000364739 TXKP42681 527 aa7.93□□□□□ -1.14
RNU4-28P-201ENST00000364739 DUSP27Q5VZP5 1158 aa7.93□□□□□ -1.14
RNU4-28P-201ENST00000364739 CYFIP1Q7L576 1253 aa7.93□□□□□ -1.14
RNU4-28P-201ENST00000364739 HDXQ7Z353 690 aa7.93□□□□□ -1.14
RNU4-28P-201ENST00000364739 KRTAP4-8A0A0G2JLE6 195 aa7.92□□□□□ -1.14
RNU4-28P-201ENST00000364739 CYP26A1O43174 497 aa7.92□□□□□ -1.14
RNU4-28P-201ENST00000364739 FAM160A1Q05DH4 1040 aa7.92□□□□□ -1.14
RNU4-28P-201ENST00000364739 LDLRAD1Q5T700 205 aa7.92□□□□□ -1.14
RNU4-28P-201ENST00000364739 SCARA3Q6AZY7 606 aa7.92□□□□□ -1.14
RNU4-28P-201ENST00000364739 BNC2Q6ZN30 1099 aaPredicted RBP7.92□□□□□ -1.14
RNU4-28P-201ENST00000364739 FMNL2Q96PY5 1086 aa7.92□□□□□ -1.14
RNU4-28P-201ENST00000364739 FBRSQ9HAH7 460 aa7.92□□□□□ -1.14
RNU4-28P-201ENST00000364739 GFRA2O00451 464 aa7.91□□□□□ -1.14
RNU4-28P-201ENST00000364739 FANCGO15287 622 aa7.91□□□□□ -1.14
RNU4-28P-201ENST00000364739 FOSL1P15407 271 aa7.91□□□□□ -1.14
RNU4-28P-201ENST00000364739 CAMK2GQ13555 558 aaPredicted RBP7.91□□□□□ -1.14
RNU4-28P-201ENST00000364739 CDC37L1Q7L3B6 337 aa7.91□□□□□ -1.14
RNU4-28P-201ENST00000364739 RELL1Q8IUW5 271 aa7.91□□□□□ -1.14
RNU4-28P-201ENST00000364739 TOP6BLQ8N6T0 577 aa7.91□□□□□ -1.14
RNU4-28P-201ENST00000364739 DUSP23Q9BVJ7 150 aa7.91□□□□□ -1.14
RNU4-28P-201ENST00000364739 KBTBD4Q9NVX7 518 aa7.91□□□□□ -1.14
RNU4-28P-201ENST00000364739 U3KQE9 123 aa7.91□□□□□ -1.14
RNU4-28P-201ENST00000364739 RLBP1P12271 317 aa7.9□□□□□ -1.14
RNU4-28P-201ENST00000364739 GRK4P32298 578 aa7.9□□□□□ -1.14
RNU4-28P-201ENST00000364739 GRIK1P39086 918 aa7.9□□□□□ -1.14
RNU4-28P-201ENST00000364739 ETF1P62495 437 aaKnown RBP7.9□□□□□ -1.14
RNU4-28P-201ENST00000364739 NKG7Q16617 165 aa7.9□□□□□ -1.14
RNU4-28P-201ENST00000364739 FAM181AQ8N9Y4 354 aa7.9□□□□□ -1.14
RNU4-28P-201ENST00000364739 TMEM74Q96NL1 305 aa7.9□□□□□ -1.14
RNU4-28P-201ENST00000364739 METTL22Q9BUU2 404 aaPredicted RBP7.9□□□□□ -1.14
RNU4-28P-201ENST00000364739 WNT10AQ9GZT5 417 aa7.9□□□□□ -1.14
RNU4-28P-201ENST00000364739 SNCAIPQ9Y6H5 919 aa7.9□□□□□ -1.14
RNU4-28P-201ENST00000364739 KIAA1324LA8MWY0 1029 aaPredicted RBP7.89□□□□□ -1.15
RNU4-28P-201ENST00000364739 F13A1P00488 732 aa7.89□□□□□ -1.15
RNU4-28P-201ENST00000364739 IRAK1P51617 712 aa7.89□□□□□ -1.15
RNU4-28P-201ENST00000364739 INTS5Q6P9B9 1019 aaKnown RBP7.89□□□□□ -1.15
RNU4-28P-201ENST00000364739 TMEM87AQ8NBN3 555 aa7.89□□□□□ -1.15
RNU4-28P-201ENST00000364739 ZNF507Q8TCN5 953 aa7.89□□□□□ -1.15
RNU4-28P-201ENST00000364739 RSRP1Q9BUV0 290 aa7.89□□□□□ -1.15
RNU4-28P-201ENST00000364739 BACH2Q9BYV9 841 aa7.89□□□□□ -1.15
RNU4-28P-201ENST00000364739 ZC3H7BQ9UGR2 993 aaKnown RBP7.89□□□□□ -1.15
RNU4-28P-201ENST00000364739 RBM47A0AV96 593 aaKnown RBP7.88□□□□□ -1.15
RNU4-28P-201ENST00000364739 CYP27A1Q02318 531 aa7.88□□□□□ -1.15
RNU4-28P-201ENST00000364739 SLBPQ14493 270 aaKnown RBP eCLIP7.88□□□□□ -1.15
RNU4-28P-201ENST00000364739 TSNAXIP1Q2TAA8 658 aa7.88□□□□□ -1.15
RNU4-28P-201ENST00000364739 RHOVQ96L33 236 aa7.88□□□□□ -1.15
RNU4-28P-201ENST00000364739 CORINQ9Y5Q5 1042 aa7.88□□□□□ -1.15
RNU4-28P-201ENST00000364739 FAM221AA4D161 298 aa7.87□□□□□ -1.15
RNU4-28P-201ENST00000364739 SPINK2P20155 84 aa7.87□□□□□ -1.15
RNU4-28P-201ENST00000364739 RPL6Q02878 288 aaKnown RBP7.87□□□□□ -1.15
RNU4-28P-201ENST00000364739 LMNB2Q03252 620 aa7.87□□□□□ -1.15
RNU4-28P-201ENST00000364739 CYP27C1Q4G0S4 372 aa7.87□□□□□ -1.15
RNU4-28P-201ENST00000364739 ARMCX6Q7L4S7 300 aa7.87□□□□□ -1.15
RNU4-28P-201ENST00000364739 DTX1Q86Y01 620 aa7.87□□□□□ -1.15
RNU4-28P-201ENST00000364739 GOLM1Q8NBJ4 401 aa7.87□□□□□ -1.15
RNU4-28P-201ENST00000364739 FBXO27Q8NI29 283 aa7.87□□□□□ -1.15
RNU4-28P-201ENST00000364739 XAGE3Q8WTP9 111 aa7.87□□□□□ -1.15
RNU4-28P-201ENST00000364739 PRDM10Q9NQV6 1147 aa7.87□□□□□ -1.15
RNU4-28P-201ENST00000364739 GGT7Q9UJ14 662 aa7.87□□□□□ -1.15
RNU4-28P-201ENST00000364739 CNTNAP4Q9C0A0 1308 aa7.86□□□□□ -1.15
RNU4-28P-201ENST00000364739 YBX3P16989 372 aaKnown RBP eCLIP7.86□□□□□ -1.15
RNU4-28P-201ENST00000364739 MSMPQ1L6U9 139 aa7.86□□□□□ -1.15
RNU4-28P-201ENST00000364739 ERMP1Q7Z2K6 904 aa7.86□□□□□ -1.15
RNU4-28P-201ENST00000364739 RGS22Q8NE09 1264 aa7.86□□□□□ -1.15
RNU4-28P-201ENST00000364739 RIN3Q8TB24 985 aa7.86□□□□□ -1.15
RNU4-28P-201ENST00000364739 HEXIM2Q96MH2 286 aaKnown RBP7.86□□□□□ -1.15
RNU4-28P-201ENST00000364739 DPH2Q9BQC3 489 aaPredicted RBP7.86□□□□□ -1.15
RNU4-28P-201ENST00000364739 TLR3O15455 904 aaKnown RBP7.85□□□□□ -1.15
RNU4-28P-201ENST00000364739 CILPO75339 1184 aa7.85□□□□□ -1.15
RNU4-28P-201ENST00000364739 PGRP06401 933 aa7.85□□□□□ -1.15
RNU4-28P-201ENST00000364739 GARTP22102 1010 aa7.85□□□□□ -1.15
RNU4-28P-201ENST00000364739 ITGAEP38570 1179 aa7.85□□□□□ -1.15
RNU4-28P-201ENST00000364739 SNAP47Q5SQN1 464 aa7.85□□□□□ -1.15
RNU4-28P-201ENST00000364739 FBXL19Q6PCT2 694 aa7.85□□□□□ -1.15
RNU4-28P-201ENST00000364739 PLD6Q8N2A8 252 aaKnown RBP7.85□□□□□ -1.15
RNU4-28P-201ENST00000364739 GATAD2BQ8WXI9 593 aa7.85□□□□□ -1.15
RNU4-28P-201ENST00000364739 GRIN3BO60391 1043 aa7.84□□□□□ -1.15
RNU4-28P-201ENST00000364739 SLITRK5O94991 958 aa7.84□□□□□ -1.15
RNU4-28P-201ENST00000364739 CPSF6Q16630 551 aaKnown RBP eCLIP7.84□□□□□ -1.15
RNU4-28P-201ENST00000364739 PRAMEF13Q5VWM6 474 aa7.84□□□□□ -1.15
RNU4-28P-201ENST00000364739 FAM214BQ7L5A3 538 aa7.84□□□□□ -1.15
RNU4-28P-201ENST00000364739 HID1Q8IV36 788 aa7.84□□□□□ -1.15
RNU4-28P-201ENST00000364739 KCT2Q8NC54 265 aa7.84□□□□□ -1.15
RNU4-28P-201ENST00000364739 FOXQ1Q9C009 403 aa7.84□□□□□ -1.15
RNU4-28P-201ENST00000364739 TJP2Q9UDY2 1190 aa7.84□□□□□ -1.15
RNU4-28P-201ENST00000364739 OAS3Q9Y6K5 1087 aaKnown RBP7.84□□□□□ -1.15
RNU4-28P-201ENST00000364739 UPK3BL1B0FP48 263 aa7.83□□□□□ -1.16
RNU4-28P-201ENST00000364739 UPK3BL2E5RIL1 263 aa7.83□□□□□ -1.16
RNU4-28P-201ENST00000364739 LRIG2O94898 1065 aa7.83□□□□□ -1.16
RNU4-28P-201ENST00000364739 EOMESO95936 686 aa7.83□□□□□ -1.16
RNU4-28P-201ENST00000364739 EIF4A3P38919 411 aaKnown RBP7.83□□□□□ -1.16
RNU4-28P-201ENST00000364739 GP2P55259 537 aaKnown RBP7.83□□□□□ -1.16
RNU4-28P-201ENST00000364739 PWP1Q13610 501 aa7.83□□□□□ -1.16
RNU4-28P-201ENST00000364739 HS2ST1Q7LGA3 356 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms