RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 HNRNPH2P55795 449 aaKnown RBP15.7■□□□□ 0.1
COL6A1-201ENST00000361866 ZMYM1Q5SVZ6 1142 aa15.7■□□□□ 0.1
COL6A1-201ENST00000361866 PAXIP1Q6ZW49 1069 aaPredicted RBP15.7■□□□□ 0.1
COL6A1-201ENST00000361866 NOSTRINQ8IVI9 506 aa15.7■□□□□ 0.1
COL6A1-201ENST00000361866 TSG101Q99816 390 aa15.7■□□□□ 0.1
COL6A1-201ENST00000361866 M0R2C6 588 aa15.69■□□□□ 0.1
COL6A1-201ENST00000361866 PDE4BQ07343 736 aa15.69■□□□□ 0.1
COL6A1-201ENST00000361866 GIMAP7Q8NHV1 300 aa15.69■□□□□ 0.1
COL6A1-201ENST00000361866 ANKIB1Q9P2G1 1089 aa15.69■□□□□ 0.1
COL6A1-201ENST00000361866 KIF23Q02241 960 aaPredicted RBP15.69■□□□□ 0.1
COL6A1-201ENST00000361866 SAMSN1Q9NSI8 373 aaKnown RBP15.69■□□□□ 0.1
COL6A1-201ENST00000361866 TTF2Q9UNY4 1162 aaKnown RBP15.69■□□□□ 0.1
COL6A1-201ENST00000361866 MAGEB6P1A0A0J9YX57 407 aa15.68■□□□□ 0.1
COL6A1-201ENST00000361866 TMEM232C9JQI7 657 aa15.68■□□□□ 0.1
COL6A1-201ENST00000361866 ENC1O14682 589 aa15.68■□□□□ 0.1
COL6A1-201ENST00000361866 ZMYND10O75800 440 aa15.68■□□□□ 0.1
COL6A1-201ENST00000361866 FAM76AQ8TAV0 307 aa15.68■□□□□ 0.1
COL6A1-201ENST00000361866 LAMC1P11047 1609 aa15.68■□□□□ 0.1
COL6A1-201ENST00000361866 CFAP74Q9C0B2 1584 aa15.68■□□□□ 0.1
COL6A1-201ENST00000361866 MPHOSPH10O00566 681 aaKnown RBP15.68■□□□□ 0.1
COL6A1-201ENST00000361866 LONRF2Q1L5Z9 754 aa15.68■□□□□ 0.1
COL6A1-201ENST00000361866 AFAP1L1Q8TED9 768 aa15.68■□□□□ 0.1
COL6A1-201ENST00000361866 NGLY1Q96IV0 654 aa15.68■□□□□ 0.1
COL6A1-201ENST00000361866 PARD6BQ9BYG5 372 aa15.68■□□□□ 0.1
COL6A1-201ENST00000361866 POLR3EQ9NVU0 708 aa15.68■□□□□ 0.1
COL6A1-201ENST00000361866 SHROOM2Q13796 1616 aa15.68■□□□□ 0.1
COL6A1-201ENST00000361866 GOLGA6L7A0A1B0GV03 622 aa15.67■□□□□ 0.1
COL6A1-201ENST00000361866 FAM170AA1A519 330 aa15.67■□□□□ 0.1
COL6A1-201ENST00000361866 DTHD1Q6ZMT9 781 aa15.67■□□□□ 0.1
COL6A1-201ENST00000361866 SIRT1Q96EB6 747 aa15.67■□□□□ 0.1
COL6A1-201ENST00000361866 PUS7LQ9H0K6 701 aaKnown RBP15.67■□□□□ 0.1
COL6A1-201ENST00000361866 AMPD3Q01432 767 aa15.67■□□□□ 0.1
COL6A1-201ENST00000361866 NR5A1Q13285 461 aa15.67■□□□□ 0.1
COL6A1-201ENST00000361866 CYP26C1Q6V0L0 522 aa15.67■□□□□ 0.1
COL6A1-201ENST00000361866 NAA15Q9BXJ9 866 aaKnown RBP15.67■□□□□ 0.1
COL6A1-201ENST00000361866 QRICH2Q9H0J4 1663 aa15.67■□□□□ 0.1
COL6A1-201ENST00000361866 CASP14P31944 242 aa15.67■□□□□ 0.1
COL6A1-201ENST00000361866 SF3A3Q12874 501 aaKnown RBP eCLIP15.67■□□□□ 0.1
COL6A1-201ENST00000361866 TMTC1Q8IUR5 882 aa15.67■□□□□ 0.1
COL6A1-201ENST00000361866 FAM114A1Q8IWE2 563 aa15.67■□□□□ 0.1
COL6A1-201ENST00000361866 DNAJC10Q8IXB1 793 aa15.67■□□□□ 0.1
COL6A1-201ENST00000361866 DYDC1Q8WWB3 177 aa15.67■□□□□ 0.1
COL6A1-201ENST00000361866 TMEM266Q2M3C6 531 aa15.67■□□□□ 0.1
COL6A1-201ENST00000361866 WWC2Q6AWC2 1192 aa15.67■□□□□ 0.1
COL6A1-201ENST00000361866 SARM1Q6SZW1 724 aa15.67■□□□□ 0.1
COL6A1-201ENST00000361866 ZSCAN29Q8IWY8 852 aaPredicted RBP15.67■□□□□ 0.1
COL6A1-201ENST00000361866 TEX13AQ9BXU3 409 aaPredicted RBP15.67■□□□□ 0.1
COL6A1-201ENST00000361866 PAK1Q13153 545 aa15.66■□□□□ 0.1
COL6A1-201ENST00000361866 TTC38Q5R3I4 469 aa15.66■□□□□ 0.1
COL6A1-201ENST00000361866 APOA5Q6Q788 366 aa15.66■□□□□ 0.1
COL6A1-201ENST00000361866 DZIP3Q86Y13 1208 aaKnown RBP15.66■□□□□ 0.1
COL6A1-201ENST00000361866 RGS22Q8NE09 1264 aa15.66■□□□□ 0.1
COL6A1-201ENST00000361866 SPAG5Q96R06 1193 aa15.66■□□□□ 0.1
COL6A1-201ENST00000361866 UIMC1Q96RL1 719 aa15.66■□□□□ 0.1
COL6A1-201ENST00000361866 SOWAHDA6NJG2 315 aa15.66■□□□□ 0.1
COL6A1-201ENST00000361866 STX10O60499 249 aa15.66■□□□□ 0.1
COL6A1-201ENST00000361866 CDC5LQ99459 802 aaKnown RBP15.66■□□□□ 0.1
COL6A1-201ENST00000361866 PYM1Q9BRP8 204 aaKnown RBP15.66■□□□□ 0.1
COL6A1-201ENST00000361866 FGFR1OPO95684 399 aaKnown RBP15.66■□□□□ 0.1
COL6A1-201ENST00000361866 IQCB1Q15051 598 aa15.66■□□□□ 0.1
COL6A1-201ENST00000361866 SLC35F6Q8N357 371 aa15.66■□□□□ 0.1
COL6A1-201ENST00000361866 CSGALNACT2Q8N6G5 542 aa15.66■□□□□ 0.1
COL6A1-201ENST00000361866 MCM9Q9NXL9 1143 aa15.66■□□□□ 0.1
COL6A1-201ENST00000361866 SND1Q7KZF4 910 aaKnown RBP eCLIP15.65■□□□□ 0.14e-8■■■■■ 34.1
COL6A1-201ENST00000361866 OTUD6BQ8N6M0 293 aa15.65■□□□□ 0.1
COL6A1-201ENST00000361866 RAB34Q9BZG1 259 aa15.65■□□□□ 0.1
COL6A1-201ENST00000361866 WWC3Q9ULE0 1092 aa15.65■□□□□ 0.1
COL6A1-201ENST00000361866 NIP7Q9Y221 180 aaKnown RBP eCLIP15.65■□□□□ 0.1
COL6A1-201ENST00000361866 CCDC152Q4G0S7 254 aa15.65■□□□□ 0.1
COL6A1-201ENST00000361866 STOX1Q6ZVD7 989 aa15.65■□□□□ 0.1
COL6A1-201ENST00000361866 FMR1NBQ8N0W7 255 aaPredicted RBP15.65■□□□□ 0.1
COL6A1-201ENST00000361866 ACSBG1Q96GR2 724 aa15.65■□□□□ 0.1
COL6A1-201ENST00000361866 GOLGA6CA6NDK9 693 aa15.65■□□□□ 0.1
COL6A1-201ENST00000361866 GOLGA6DP0CG33 693 aa15.65■□□□□ 0.1
COL6A1-201ENST00000361866 NAPAP54920 295 aa15.65■□□□□ 0.1
COL6A1-201ENST00000361866 LETM2Q2VYF4 491 aa15.65■□□□□ 0.1
COL6A1-201ENST00000361866 NOC4LQ9BVI4 516 aaKnown RBP15.65■□□□□ 0.1
COL6A1-201ENST00000361866 GOLGA6AQ9NYA3 693 aa15.65■□□□□ 0.1
COL6A1-201ENST00000361866 PHKG2P15735 406 aa15.64■□□□□ 0.09
COL6A1-201ENST00000361866 PDE6AP16499 860 aa15.64■□□□□ 0.09
COL6A1-201ENST00000361866 CASP1P29466 404 aa15.64■□□□□ 0.09
COL6A1-201ENST00000361866 CDC25AP30304 524 aa15.64■□□□□ 0.09
COL6A1-201ENST00000361866 HPDP32754 393 aaPredicted RBP15.64■□□□□ 0.09
COL6A1-201ENST00000361866 AKNAD1Q5T1N1 836 aa15.64■□□□□ 0.09
COL6A1-201ENST00000361866 CERS3Q8IU89 383 aa15.64■□□□□ 0.09
COL6A1-201ENST00000361866 SDR42E1Q8WUS8 393 aa15.64■□□□□ 0.09
COL6A1-201ENST00000361866 NELFBQ8WX92 580 aa15.64■□□□□ 0.09
COL6A1-201ENST00000361866 JAKMIP2Q96AA8 810 aa15.64■□□□□ 0.09
COL6A1-201ENST00000361866 CRNKL1Q9BZJ0 848 aaKnown RBP15.64■□□□□ 0.09
COL6A1-201ENST00000361866 INCENPQ9NQS7 918 aa15.64■□□□□ 0.09
COL6A1-201ENST00000361866 TSPY3P0CV98 308 aa15.64■□□□□ 0.09
COL6A1-201ENST00000361866 TSPY8P0CW00 308 aa15.64■□□□□ 0.09
COL6A1-201ENST00000361866 ZNF76P36508 570 aa15.64■□□□□ 0.09
COL6A1-201ENST00000361866 VAV2P52735 878 aa15.64■□□□□ 0.09
COL6A1-201ENST00000361866 ARMCX5Q6P1M9 558 aa15.64■□□□□ 0.09
COL6A1-201ENST00000361866 DHX40Q8IX18 779 aaKnown RBP15.64■□□□□ 0.09
COL6A1-201ENST00000361866 ZCCHC11Q5TAX3 1644 aaKnown RBP15.64■□□□□ 0.09
COL6A1-201ENST00000361866 EXOC5O00471 708 aa15.64■□□□□ 0.09
COL6A1-201ENST00000361866 NDUFAB1O14561 156 aa15.64■□□□□ 0.09
COL6A1-201ENST00000361866 BRD3Q15059 726 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms