RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 USP31Q70CQ4 1352 aa13.71□□□□□ -0.21
DNMT1-202ENST00000359526 IL6STP40189 918 aaPredicted RBP13.71□□□□□ -0.21
DNMT1-202ENST00000359526 NLRP12P59046 1061 aa13.71□□□□□ -0.21
DNMT1-202ENST00000359526 PPP1R14CQ8TAE6 165 aa13.71□□□□□ -0.21
DNMT1-202ENST00000359526 ZRANB1Q9UGI0 708 aa13.71□□□□□ -0.21
DNMT1-202ENST00000359526 KCNG1Q9UIX4 513 aa13.71□□□□□ -0.21
DNMT1-202ENST00000359526 RPL13P26373 211 aaKnown RBP13.71□□□□□ -0.22
DNMT1-202ENST00000359526 KRT24Q2M2I5 525 aa13.71□□□□□ -0.22
DNMT1-202ENST00000359526 TNNI3KQ59H18 835 aa13.71□□□□□ -0.22
DNMT1-202ENST00000359526 HS2ST1Q7LGA3 356 aa13.71□□□□□ -0.22
DNMT1-202ENST00000359526 MAGEB6Q8N7X4 407 aa13.71□□□□□ -0.22
DNMT1-202ENST00000359526 NUP58Q9BVL2 599 aa13.71□□□□□ -0.22
DNMT1-202ENST00000359526 CBX8Q9HC52 389 aa13.71□□□□□ -0.22
DNMT1-202ENST00000359526 ARHGEF10LQ9HCE6 1279 aa13.71□□□□□ -0.22
DNMT1-202ENST00000359526 KCNH3Q9ULD8 1083 aa13.71□□□□□ -0.22
DNMT1-202ENST00000359526 FPGT-TNNI3KV9GXZ4 949 aa13.71□□□□□ -0.22
DNMT1-202ENST00000359526 EIF4A1P60842 406 aaKnown RBP13.7□□□□□ -0.22
DNMT1-202ENST00000359526 CFAP58Q5T655 872 aa13.7□□□□□ -0.22
DNMT1-202ENST00000359526 LEO1Q8WVC0 666 aaPredicted RBP13.7□□□□□ -0.22
DNMT1-202ENST00000359526 APBA3O96018 575 aa13.7□□□□□ -0.22
DNMT1-202ENST00000359526 TCIRG1Q13488 830 aa13.7□□□□□ -0.22
DNMT1-202ENST00000359526 FAM98CQ17RN3 349 aaKnown RBP13.7□□□□□ -0.22
DNMT1-202ENST00000359526 IGSF22Q8N9C0 903 aa13.7□□□□□ -0.22
DNMT1-202ENST00000359526 SPATA31A3Q5VYP0 1347 aa13.7□□□□□ -0.22
DNMT1-202ENST00000359526 RHOXF2BP0C7M4 288 aa13.7□□□□□ -0.22
DNMT1-202ENST00000359526 FERP16591 822 aa13.7□□□□□ -0.22
DNMT1-202ENST00000359526 MCM7P33993 719 aa13.7□□□□□ -0.22
DNMT1-202ENST00000359526 FANCCQ00597 558 aa13.7□□□□□ -0.22
DNMT1-202ENST00000359526 CHST3Q7LGC8 479 aa13.7□□□□□ -0.22
DNMT1-202ENST00000359526 CAPZA3Q96KX2 299 aa13.7□□□□□ -0.22
DNMT1-202ENST00000359526 RHOXF2Q9BQY4 288 aa13.7□□□□□ -0.22
DNMT1-202ENST00000359526 BRD1O95696 1058 aa13.7□□□□□ -0.22
DNMT1-202ENST00000359526 SPATA24Q86W54 205 aa13.7□□□□□ -0.22
DNMT1-202ENST00000359526 SMARCC2Q8TAQ2 1214 aa13.7□□□□□ -0.22
DNMT1-202ENST00000359526 NAP1L3Q99457 506 aaPredicted RBP13.7□□□□□ -0.22
DNMT1-202ENST00000359526 PLEKHG2Q9H7P9 1386 aa13.7□□□□□ -0.22
DNMT1-202ENST00000359526 ERVV-1B6SEH8 477 aa13.69□□□□□ -0.22
DNMT1-202ENST00000359526 CCDC6Q16204 474 aa13.69□□□□□ -0.22
DNMT1-202ENST00000359526 ZBTB9Q96C00 473 aa13.69□□□□□ -0.22
DNMT1-202ENST00000359526 JCADQ9P266 1359 aa13.69□□□□□ -0.22
DNMT1-202ENST00000359526 ARHGAP6O43182 974 aa13.69□□□□□ -0.22
DNMT1-202ENST00000359526 B4GALNT4Q76KP1 1039 aa13.69□□□□□ -0.22
DNMT1-202ENST00000359526 NIM1KQ8IY84 436 aa13.69□□□□□ -0.22
DNMT1-202ENST00000359526 CCDC26Q8TAB7 109 aa13.69□□□□□ -0.22
DNMT1-202ENST00000359526 JAKMIP2Q96AA8 810 aa13.69□□□□□ -0.22
DNMT1-202ENST00000359526 CCDC114Q96M63 670 aa13.69□□□□□ -0.22
DNMT1-202ENST00000359526 ADRA2BP18089 450 aa13.69□□□□□ -0.22
DNMT1-202ENST00000359526 GCKRQ14397 625 aa13.69□□□□□ -0.22
DNMT1-202ENST00000359526 CEP128Q6ZU80 1094 aa13.69□□□□□ -0.22
DNMT1-202ENST00000359526 SV2BQ7L1I2 683 aa13.69□□□□□ -0.22
DNMT1-202ENST00000359526 GPR108Q9NPR9 543 aa13.69□□□□□ -0.22
DNMT1-202ENST00000359526 ZEB2O60315 1214 aa13.69□□□□□ -0.22
DNMT1-202ENST00000359526 PCCAP05165 728 aaPredicted RBP13.69□□□□□ -0.22
DNMT1-202ENST00000359526 SARNPP82979 210 aaKnown RBP13.69□□□□□ -0.22
DNMT1-202ENST00000359526 MTUS1Q9ULD2 1270 aa13.69□□□□□ -0.22
DNMT1-202ENST00000359526 CLTCQ00610 1675 aaKnown RBP13.69□□□□□ -0.22
DNMT1-202ENST00000359526 DIP2BQ9P265 1576 aa13.69□□□□□ -0.22
DNMT1-202ENST00000359526 FAM13AO94988 1023 aa13.68□□□□□ -0.22
DNMT1-202ENST00000359526 DPP8Q6V1X1 898 aaPredicted RBP13.68□□□□□ -0.22
DNMT1-202ENST00000359526 TMTC1Q8IUR5 882 aa13.68□□□□□ -0.22
DNMT1-202ENST00000359526 CCDC65Q8IXS2 484 aa13.68□□□□□ -0.22
DNMT1-202ENST00000359526 APPBP2Q92624 585 aa13.68□□□□□ -0.22
DNMT1-202ENST00000359526 LRRC45Q96CN5 670 aa13.68□□□□□ -0.22
DNMT1-202ENST00000359526 ANGEL1Q9UNK9 670 aaKnown RBP13.68□□□□□ -0.22
DNMT1-202ENST00000359526 ARHGEF6Q15052 776 aa13.68□□□□□ -0.22
DNMT1-202ENST00000359526 G2E3Q7L622 706 aa13.68□□□□□ -0.22
DNMT1-202ENST00000359526 CPLX4Q7Z7G2 160 aa13.68□□□□□ -0.22
DNMT1-202ENST00000359526 IQCDQ96DY2 449 aa13.68□□□□□ -0.22
DNMT1-202ENST00000359526 ATG3Q9NT62 314 aa13.68□□□□□ -0.22
DNMT1-202ENST00000359526 DCCP43146 1447 aa13.68□□□□□ -0.22
DNMT1-202ENST00000359526 A0A1B0GUA9 196 aa13.68□□□□□ -0.22
DNMT1-202ENST00000359526 SPDYE3A6NKU9 549 aa13.68□□□□□ -0.22
DNMT1-202ENST00000359526 CNNM4Q6P4Q7 775 aa13.68□□□□□ -0.22
DNMT1-202ENST00000359526 OTUD7AQ8TE49 926 aaPredicted RBP13.68□□□□□ -0.22
DNMT1-202ENST00000359526 KIAA1210Q9ULL0 1709 aa13.68□□□□□ -0.22
DNMT1-202ENST00000359526 DMTNQ08495 405 aa13.68□□□□□ -0.22
DNMT1-202ENST00000359526 AFAP1L1Q8TED9 768 aa13.68□□□□□ -0.22
DNMT1-202ENST00000359526 IMPG2Q9BZV3 1241 aa13.68□□□□□ -0.22
DNMT1-202ENST00000359526 QTRT2Q9H974 415 aaKnown RBP13.68□□□□□ -0.22
DNMT1-202ENST00000359526 AS3MTQ9HBK9 375 aa13.68□□□□□ -0.22
DNMT1-202ENST00000359526 TMOD4Q9NZQ9 345 aa13.68□□□□□ -0.22
DNMT1-202ENST00000359526 CHMP4BP1P59074 171 aa13.67□□□□□ -0.22
DNMT1-202ENST00000359526 CROCCP2Q86T23 111 aa13.67□□□□□ -0.22
DNMT1-202ENST00000359526 SAMD15Q9P1V8 674 aa13.67□□□□□ -0.22
DNMT1-202ENST00000359526 ATP5DP30049 168 aa13.67□□□□□ -0.22
DNMT1-202ENST00000359526 MCM9Q9NXL9 1143 aa13.67□□□□□ -0.22
DNMT1-202ENST00000359526 CPSF2Q9P2I0 782 aaKnown RBP13.67□□□□□ -0.22
DNMT1-202ENST00000359526 MRVI1Q9Y6F6 885 aa13.67□□□□□ -0.22
DNMT1-202ENST00000359526 ITGA6P23229 1130 aa13.67□□□□□ -0.22
DNMT1-202ENST00000359526 PPP1R9BQ96SB3 815 aa13.67□□□□□ -0.22
DNMT1-202ENST00000359526 SYNCQ9H7C4 482 aa13.67□□□□□ -0.22
DNMT1-202ENST00000359526 UFL1O94874 794 aa13.67□□□□□ -0.22
DNMT1-202ENST00000359526 CPA1P15085 419 aa13.67□□□□□ -0.22
DNMT1-202ENST00000359526 PABPC4Q13310 644 aaKnown RBP eCLIP13.67□□□□□ -0.22
DNMT1-202ENST00000359526 NOC4LQ9BVI4 516 aaKnown RBP13.67□□□□□ -0.22
DNMT1-202ENST00000359526 IBTKQ9P2D0 1353 aaPredicted RBP13.67□□□□□ -0.22
DNMT1-202ENST00000359526 DNAJC21Q5F1R6 531 aaKnown RBP13.67□□□□□ -0.22
DNMT1-202ENST00000359526 C17orf53Q8N3J3 647 aaPredicted RBP13.67□□□□□ -0.22
DNMT1-202ENST00000359526 KBTBD3Q8NAB2 608 aa13.67□□□□□ -0.22
DNMT1-202ENST00000359526 ZNF526Q8TF50 670 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms